Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29265 and AO353_29270 are separated by 492 nucleotides AO353_29270 and AO353_29275 overlap by 8 nucleotides AO353_29275 and AO353_29280 are separated by 15 nucleotides AO353_29280 and AO353_29285 are separated by 37 nucleotides
AO353_29265: AO353_29265 - GCN5 family acetyltransferase, at 6,358,698 to 6,359,165
_29265
AO353_29270: AO353_29270 - type VI secretion system protein, at 6,359,658 to 6,360,158
_29270
AO353_29275: AO353_29275 - hypothetical protein, at 6,360,151 to 6,360,855
_29275
AO353_29280: AO353_29280 - hypothetical protein, at 6,360,871 to 6,361,350
_29280
AO353_29285: AO353_29285 - XRE family transcriptional regulator, at 6,361,388 to 6,361,936
_29285
Position (kb)
6360
6361 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6359.200 kb on + strand at 6359.200 kb on + strand at 6359.200 kb on + strand at 6359.201 kb on - strand at 6359.201 kb on - strand at 6359.201 kb on - strand at 6359.236 kb on - strand at 6359.239 kb on + strand at 6359.239 kb on + strand at 6359.239 kb on + strand at 6359.240 kb on - strand at 6359.240 kb on - strand at 6359.240 kb on - strand at 6359.240 kb on - strand at 6359.252 kb on - strand at 6359.322 kb on - strand at 6359.322 kb on - strand at 6359.322 kb on - strand at 6359.322 kb on - strand at 6359.379 kb on - strand at 6359.453 kb on + strand at 6359.477 kb on - strand at 6359.477 kb on - strand at 6359.494 kb on - strand at 6359.503 kb on + strand at 6359.504 kb on - strand at 6359.504 kb on - strand at 6359.569 kb on - strand at 6359.657 kb on + strand at 6359.658 kb on - strand at 6359.729 kb on - strand, within AO353_29270 at 6359.729 kb on - strand, within AO353_29270 at 6359.877 kb on - strand, within AO353_29270 at 6359.877 kb on - strand, within AO353_29270 at 6359.977 kb on - strand, within AO353_29270 at 6360.042 kb on + strand, within AO353_29270 at 6360.043 kb on - strand, within AO353_29270 at 6360.044 kb on + strand, within AO353_29270 at 6360.045 kb on - strand, within AO353_29270 at 6360.045 kb on - strand, within AO353_29270 at 6360.045 kb on - strand, within AO353_29270 at 6360.071 kb on - strand, within AO353_29270 at 6360.129 kb on + strand at 6360.129 kb on + strand at 6360.130 kb on - strand at 6360.131 kb on + strand at 6360.132 kb on - strand at 6360.134 kb on + strand at 6360.223 kb on - strand, within AO353_29275 at 6360.241 kb on + strand, within AO353_29275 at 6360.300 kb on + strand, within AO353_29275 at 6360.321 kb on + strand, within AO353_29275 at 6360.322 kb on - strand, within AO353_29275 at 6360.322 kb on - strand, within AO353_29275 at 6360.394 kb on + strand, within AO353_29275 at 6360.482 kb on + strand, within AO353_29275 at 6360.482 kb on + strand, within AO353_29275 at 6360.483 kb on - strand, within AO353_29275 at 6360.520 kb on - strand, within AO353_29275 at 6360.526 kb on + strand, within AO353_29275 at 6360.526 kb on + strand, within AO353_29275 at 6360.527 kb on - strand, within AO353_29275 at 6360.543 kb on + strand, within AO353_29275 at 6360.547 kb on + strand, within AO353_29275 at 6360.547 kb on + strand, within AO353_29275 at 6360.548 kb on - strand, within AO353_29275 at 6360.548 kb on - strand, within AO353_29275 at 6360.548 kb on - strand, within AO353_29275 at 6360.620 kb on - strand, within AO353_29275 at 6360.630 kb on + strand, within AO353_29275 at 6360.637 kb on + strand, within AO353_29275 at 6360.656 kb on - strand, within AO353_29275 at 6360.660 kb on - strand, within AO353_29275 at 6360.660 kb on - strand, within AO353_29275 at 6360.664 kb on - strand, within AO353_29275 at 6361.065 kb on + strand, within AO353_29280 at 6361.071 kb on - strand, within AO353_29280 at 6361.154 kb on + strand, within AO353_29280 at 6361.155 kb on - strand, within AO353_29280 at 6361.156 kb on + strand, within AO353_29280 at 6361.157 kb on - strand, within AO353_29280 at 6361.158 kb on + strand, within AO353_29280 at 6361.236 kb on - strand, within AO353_29280 at 6361.258 kb on - strand, within AO353_29280 at 6361.329 kb on + strand at 6361.329 kb on + strand at 6361.406 kb on - strand at 6361.476 kb on + strand, within AO353_29285 at 6361.476 kb on + strand, within AO353_29285 at 6361.476 kb on + strand, within AO353_29285 at 6361.504 kb on + strand, within AO353_29285 at 6361.611 kb on + strand, within AO353_29285 at 6361.612 kb on - strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.719 kb on + strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285 at 6361.720 kb on - strand, within AO353_29285
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 6,359,200 + +0.5 6,359,200 + -0.1 6,359,200 + +0.3 6,359,201 - -1.5 6,359,201 - -0.8 6,359,201 - +0.3 6,359,236 - +1.3 6,359,239 + +0.7 6,359,239 + +0.3 6,359,239 + +0.9 6,359,240 - +0.5 6,359,240 - -0.7 6,359,240 - +0.0 6,359,240 - +0.1 6,359,252 - +1.5 6,359,322 - -2.4 6,359,322 - +2.3 6,359,322 - +2.5 6,359,322 - -1.9 6,359,379 - -0.3 6,359,453 + -1.3 6,359,477 - +0.1 6,359,477 - -0.9 6,359,494 - +0.1 6,359,503 + +0.3 6,359,504 - -0.0 6,359,504 - -1.0 6,359,569 - +1.0 6,359,657 + +0.1 6,359,658 - +2.0 6,359,729 - AO353_29270 0.14 -1.6 6,359,729 - AO353_29270 0.14 +0.7 6,359,877 - AO353_29270 0.44 +0.7 6,359,877 - AO353_29270 0.44 +0.7 6,359,977 - AO353_29270 0.64 -1.9 6,360,042 + AO353_29270 0.77 -1.3 6,360,043 - AO353_29270 0.77 +0.0 6,360,044 + AO353_29270 0.77 -1.9 6,360,045 - AO353_29270 0.77 -0.3 6,360,045 - AO353_29270 0.77 -0.9 6,360,045 - AO353_29270 0.77 -0.7 6,360,071 - AO353_29270 0.82 -0.8 6,360,129 + -0.3 6,360,129 + +0.7 6,360,130 - -0.9 6,360,131 + +0.9 6,360,132 - -1.0 6,360,134 + -1.5 6,360,223 - AO353_29275 0.10 -3.1 6,360,241 + AO353_29275 0.13 +0.1 6,360,300 + AO353_29275 0.21 -1.4 6,360,321 + AO353_29275 0.24 +0.9 6,360,322 - AO353_29275 0.24 +1.7 6,360,322 - AO353_29275 0.24 +0.9 6,360,394 + AO353_29275 0.34 -1.9 6,360,482 + AO353_29275 0.47 -1.0 6,360,482 + AO353_29275 0.47 -1.3 6,360,483 - AO353_29275 0.47 +2.0 6,360,520 - AO353_29275 0.52 -0.5 6,360,526 + AO353_29275 0.53 +0.1 6,360,526 + AO353_29275 0.53 +1.7 6,360,527 - AO353_29275 0.53 -1.9 6,360,543 + AO353_29275 0.56 +0.1 6,360,547 + AO353_29275 0.56 -2.3 6,360,547 + AO353_29275 0.56 -0.3 6,360,548 - AO353_29275 0.56 +0.7 6,360,548 - AO353_29275 0.56 -1.9 6,360,548 - AO353_29275 0.56 +1.7 6,360,620 - AO353_29275 0.67 -1.3 6,360,630 + AO353_29275 0.68 +0.9 6,360,637 + AO353_29275 0.69 -0.3 6,360,656 - AO353_29275 0.72 -3.3 6,360,660 - AO353_29275 0.72 -0.4 6,360,660 - AO353_29275 0.72 -2.3 6,360,664 - AO353_29275 0.73 +1.0 6,361,065 + AO353_29280 0.40 +0.5 6,361,071 - AO353_29280 0.42 +0.7 6,361,154 + AO353_29280 0.59 +1.5 6,361,155 - AO353_29280 0.59 +0.3 6,361,156 + AO353_29280 0.59 +0.7 6,361,157 - AO353_29280 0.60 +0.7 6,361,158 + AO353_29280 0.60 +1.0 6,361,236 - AO353_29280 0.76 +1.0 6,361,258 - AO353_29280 0.81 -0.3 6,361,329 + +1.3 6,361,329 + -1.6 6,361,406 - +0.1 6,361,476 + AO353_29285 0.16 -0.9 6,361,476 + AO353_29285 0.16 +0.5 6,361,476 + AO353_29285 0.16 +2.0 6,361,504 + AO353_29285 0.21 +1.3 6,361,611 + AO353_29285 0.41 -1.0 6,361,612 - AO353_29285 0.41 -1.0 6,361,719 + AO353_29285 0.60 -0.5 6,361,719 + +0.7 6,361,719 + AO353_29285 0.60 +2.2 6,361,719 + AO353_29285 0.60 -0.9 6,361,719 + AO353_29285 0.60 +1.5 6,361,719 + AO353_29285 0.60 +0.3 6,361,719 + AO353_29285 0.60 -0.3 6,361,719 + AO353_29285 0.60 -0.9 6,361,720 - AO353_29285 0.60 +1.7 6,361,720 - AO353_29285 0.60 +0.0 6,361,720 - AO353_29285 0.60 +0.2 6,361,720 - AO353_29285 0.60 -1.0 6,361,720 - AO353_29285 0.60 +2.3 6,361,720 - AO353_29285 0.60 -0.3 6,361,720 - AO353_29285 0.60 -1.0 6,361,720 - AO353_29285 0.60 -1.7 6,361,720 - AO353_29285 0.60 +0.5
Or see this region's nucleotide sequence