Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26755 and AO353_26760 are separated by 390 nucleotides AO353_26760 and AO353_26765 are separated by 287 nucleotides
AO353_26755: AO353_26755 - hypothetical protein, at 5,859,247 to 5,859,600
_26755
AO353_26760: AO353_26760 - hypothetical protein, at 5,859,991 to 5,860,281
_26760
AO353_26765: AO353_26765 - magnesium-translocating P-type ATPase, at 5,860,569 to 5,863,283
_26765
Position (kb)
5859
5860
5861 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5859.033 kb on + strand at 5859.033 kb on + strand at 5859.033 kb on + strand at 5859.033 kb on + strand at 5859.034 kb on - strand at 5859.034 kb on - strand at 5859.105 kb on - strand at 5859.105 kb on - strand at 5859.105 kb on - strand at 5859.158 kb on + strand at 5859.159 kb on - strand at 5859.209 kb on + strand at 5859.428 kb on - strand, within AO353_26755 at 5859.479 kb on - strand, within AO353_26755 at 5859.507 kb on + strand, within AO353_26755 at 5859.507 kb on + strand, within AO353_26755 at 5859.507 kb on + strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.508 kb on - strand, within AO353_26755 at 5859.564 kb on + strand, within AO353_26755 at 5859.565 kb on - strand at 5859.565 kb on - strand at 5859.598 kb on + strand at 5859.598 kb on + strand at 5859.661 kb on - strand at 5859.661 kb on - strand at 5859.661 kb on - strand at 5859.686 kb on + strand at 5859.686 kb on + strand at 5859.686 kb on + strand at 5859.686 kb on + strand at 5859.715 kb on + strand at 5859.723 kb on + strand at 5859.724 kb on - strand at 5859.724 kb on - strand at 5859.745 kb on + strand at 5859.746 kb on - strand at 5859.773 kb on + strand at 5859.773 kb on + strand at 5859.774 kb on - strand at 5859.774 kb on - strand at 5859.774 kb on - strand at 5859.836 kb on + strand at 5859.836 kb on + strand at 5859.836 kb on + strand at 5859.837 kb on - strand at 5859.837 kb on - strand at 5859.882 kb on + strand at 5859.882 kb on + strand at 5859.950 kb on + strand at 5859.991 kb on - strand at 5860.005 kb on + strand at 5860.005 kb on + strand at 5860.010 kb on + strand at 5860.010 kb on + strand at 5860.011 kb on - strand at 5860.011 kb on - strand at 5860.023 kb on - strand, within AO353_26760 at 5860.049 kb on + strand, within AO353_26760 at 5860.242 kb on - strand, within AO353_26760 at 5860.290 kb on + strand at 5860.290 kb on + strand at 5860.304 kb on + strand at 5860.304 kb on + strand at 5860.304 kb on + strand at 5860.304 kb on + strand at 5860.305 kb on - strand at 5860.305 kb on - strand at 5860.305 kb on - strand at 5860.401 kb on - strand at 5860.463 kb on + strand at 5860.463 kb on + strand at 5860.497 kb on + strand at 5860.497 kb on + strand at 5860.513 kb on + strand at 5860.514 kb on - strand at 5860.517 kb on + strand at 5860.517 kb on + strand at 5860.517 kb on + strand at 5860.518 kb on - strand at 5860.579 kb on + strand at 5860.579 kb on + strand at 5860.579 kb on + strand at 5860.673 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.824 kb on + strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.825 kb on - strand at 5860.866 kb on + strand, within AO353_26765 at 5860.919 kb on + strand, within AO353_26765 at 5860.919 kb on + strand, within AO353_26765 at 5861.214 kb on + strand, within AO353_26765 at 5861.214 kb on + strand, within AO353_26765 at 5861.214 kb on + strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765 at 5861.215 kb on - strand, within AO353_26765
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,859,033 + -0.9 5,859,033 + +0.5 5,859,033 + +1.1 5,859,033 + +0.1 5,859,034 - -0.2 5,859,034 - -0.0 5,859,105 - -1.7 5,859,105 - +1.4 5,859,105 - +0.2 5,859,158 + +0.2 5,859,159 - -0.4 5,859,209 + -0.0 5,859,428 - AO353_26755 0.51 +1.1 5,859,479 - AO353_26755 0.66 +2.2 5,859,507 + AO353_26755 0.73 -1.9 5,859,507 + AO353_26755 0.73 -0.4 5,859,507 + AO353_26755 0.73 +0.6 5,859,508 - AO353_26755 0.74 +1.0 5,859,508 - AO353_26755 0.74 -0.7 5,859,508 - AO353_26755 0.74 +2.1 5,859,508 - AO353_26755 0.74 +1.6 5,859,508 - AO353_26755 0.74 +0.6 5,859,508 - AO353_26755 0.74 -0.9 5,859,564 + AO353_26755 0.90 +2.2 5,859,565 - -0.4 5,859,565 - +0.6 5,859,598 + +0.4 5,859,598 + +1.1 5,859,661 - +2.0 5,859,661 - +0.1 5,859,661 - +1.0 5,859,686 + +1.1 5,859,686 + -0.7 5,859,686 + +1.1 5,859,686 + -0.9 5,859,715 + -1.2 5,859,723 + +0.8 5,859,724 - +0.6 5,859,724 - +0.2 5,859,745 + +1.6 5,859,746 - +2.0 5,859,773 + -1.5 5,859,773 + +0.3 5,859,774 - -0.4 5,859,774 - -0.0 5,859,774 - +0.1 5,859,836 + +0.3 5,859,836 + +1.0 5,859,836 + -1.4 5,859,837 - +1.0 5,859,837 - +1.6 5,859,882 + +1.2 5,859,882 + +0.2 5,859,950 + +0.6 5,859,991 - +0.6 5,860,005 + +0.2 5,860,005 + -0.4 5,860,010 + -0.4 5,860,010 + -1.0 5,860,011 - +0.6 5,860,011 - -0.4 5,860,023 - AO353_26760 0.11 +1.1 5,860,049 + AO353_26760 0.20 +2.1 5,860,242 - AO353_26760 0.86 -0.4 5,860,290 + +0.6 5,860,290 + +0.4 5,860,304 + -1.4 5,860,304 + +1.0 5,860,304 + +1.0 5,860,304 + -1.4 5,860,305 - +1.5 5,860,305 - +0.2 5,860,305 - +0.6 5,860,401 - +0.4 5,860,463 + -0.4 5,860,463 + -0.4 5,860,497 + +0.2 5,860,497 + +0.1 5,860,513 + +0.2 5,860,514 - +0.2 5,860,517 + +0.4 5,860,517 + +1.1 5,860,517 + +0.2 5,860,518 - +0.2 5,860,579 + +1.8 5,860,579 + +1.8 5,860,579 + +2.0 5,860,673 + -2.4 5,860,824 + +0.1 5,860,824 + -1.9 5,860,824 + +0.6 5,860,824 + -0.9 5,860,824 + -0.4 5,860,824 + +0.5 5,860,824 + +1.2 5,860,824 + -0.4 5,860,824 + +0.6 5,860,824 + +1.2 5,860,824 + +1.2 5,860,824 + -0.5 5,860,824 + +3.1 5,860,825 - +0.6 5,860,825 - -0.0 5,860,825 - -0.6 5,860,825 - -0.4 5,860,825 - +1.6 5,860,825 - +0.4 5,860,825 - -1.4 5,860,825 - +0.5 5,860,825 - -1.9 5,860,825 - +0.2 5,860,866 + AO353_26765 0.11 -0.7 5,860,919 + AO353_26765 0.13 -0.1 5,860,919 + AO353_26765 0.13 +0.6 5,861,214 + AO353_26765 0.24 +0.1 5,861,214 + AO353_26765 0.24 +0.6 5,861,214 + AO353_26765 0.24 +0.1 5,861,215 - AO353_26765 0.24 -0.0 5,861,215 - AO353_26765 0.24 -1.0 5,861,215 - AO353_26765 0.24 -0.4 5,861,215 - AO353_26765 0.24 -0.8 5,861,215 - AO353_26765 0.24 +2.4 5,861,215 - AO353_26765 0.24 +1.2
Or see this region's nucleotide sequence