Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25620 and AO353_25625 are separated by 133 nucleotides AO353_25625 and AO353_25630 are separated by 11 nucleotides AO353_25630 and AO353_25635 overlap by 1 nucleotides
AO353_25620: AO353_25620 - MFS transporter, at 5,651,293 to 5,652,492
_25620
AO353_25625: AO353_25625 - hypothetical protein, at 5,652,626 to 5,653,333
_25625
AO353_25630: AO353_25630 - arginine N-succinyltransferase, at 5,653,345 to 5,654,379
_25630
AO353_25635: AO353_25635 - citrulline utilization hydrolase (from data) , at 5,654,379 to 5,655,314
_25635
Position (kb)
5653
5654
5655 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5652.388 kb on + strand at 5652.388 kb on + strand at 5652.388 kb on + strand at 5652.485 kb on + strand at 5652.489 kb on - strand at 5652.511 kb on - strand at 5652.851 kb on + strand, within AO353_25625 at 5653.095 kb on - strand, within AO353_25625 at 5653.095 kb on - strand, within AO353_25625 at 5653.095 kb on - strand, within AO353_25625 at 5653.347 kb on - strand at 5653.520 kb on + strand, within AO353_25630 at 5653.520 kb on + strand at 5653.521 kb on - strand, within AO353_25630 at 5653.521 kb on - strand at 5653.521 kb on - strand, within AO353_25630 at 5653.565 kb on - strand, within AO353_25630 at 5653.565 kb on - strand, within AO353_25630 at 5653.640 kb on + strand, within AO353_25630 at 5653.641 kb on - strand, within AO353_25630 at 5653.641 kb on - strand, within AO353_25630 at 5653.641 kb on - strand, within AO353_25630 at 5653.641 kb on - strand, within AO353_25630 at 5653.809 kb on - strand, within AO353_25630 at 5653.925 kb on + strand, within AO353_25630 at 5653.926 kb on - strand, within AO353_25630 at 5653.926 kb on - strand, within AO353_25630 at 5653.926 kb on - strand, within AO353_25630 at 5653.926 kb on - strand, within AO353_25630 at 5653.926 kb on - strand, within AO353_25630 at 5654.120 kb on + strand, within AO353_25630 at 5654.120 kb on + strand, within AO353_25630 at 5654.126 kb on + strand, within AO353_25630 at 5654.126 kb on + strand, within AO353_25630 at 5654.126 kb on + strand, within AO353_25630 at 5654.126 kb on + strand, within AO353_25630 at 5654.126 kb on + strand, within AO353_25630 at 5654.127 kb on - strand, within AO353_25630 at 5654.127 kb on - strand, within AO353_25630 at 5654.127 kb on - strand, within AO353_25630 at 5654.210 kb on + strand, within AO353_25630 at 5654.211 kb on - strand, within AO353_25630 at 5654.416 kb on + strand at 5654.416 kb on + strand at 5654.416 kb on + strand at 5654.416 kb on + strand at 5654.416 kb on + strand at 5654.497 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.997 kb on + strand, within AO353_25635 at 5654.997 kb on + strand, within AO353_25635 at 5654.998 kb on - strand, within AO353_25635 at 5655.172 kb on + strand, within AO353_25635 at 5655.172 kb on + strand, within AO353_25635 at 5655.173 kb on - strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.205 kb on - strand, within AO353_25635
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,652,388 + +1.9 5,652,388 + -1.8 5,652,388 + +1.5 5,652,485 + +1.1 5,652,489 - -0.5 5,652,511 - +1.9 5,652,851 + AO353_25625 0.32 -2.0 5,653,095 - AO353_25625 0.66 -0.5 5,653,095 - AO353_25625 0.66 -1.5 5,653,095 - AO353_25625 0.66 +0.9 5,653,347 - +0.7 5,653,520 + AO353_25630 0.17 +0.9 5,653,520 + +0.5 5,653,521 - AO353_25630 0.17 +1.9 5,653,521 - +1.5 5,653,521 - AO353_25630 0.17 -0.3 5,653,565 - AO353_25630 0.21 +0.9 5,653,565 - AO353_25630 0.21 +0.2 5,653,640 + AO353_25630 0.29 +0.1 5,653,641 - AO353_25630 0.29 +0.5 5,653,641 - AO353_25630 0.29 +1.1 5,653,641 - AO353_25630 0.29 +0.5 5,653,641 - AO353_25630 0.29 -0.2 5,653,809 - AO353_25630 0.45 +0.8 5,653,925 + AO353_25630 0.56 +0.1 5,653,926 - AO353_25630 0.56 -0.8 5,653,926 - AO353_25630 0.56 +2.1 5,653,926 - AO353_25630 0.56 +2.5 5,653,926 - AO353_25630 0.56 +0.5 5,653,926 - AO353_25630 0.56 +1.7 5,654,120 + AO353_25630 0.75 -0.1 5,654,120 + AO353_25630 0.75 -1.5 5,654,126 + AO353_25630 0.75 -0.5 5,654,126 + AO353_25630 0.75 +0.9 5,654,126 + AO353_25630 0.75 -0.0 5,654,126 + AO353_25630 0.75 -0.2 5,654,126 + AO353_25630 0.75 +0.5 5,654,127 - AO353_25630 0.76 -0.5 5,654,127 - AO353_25630 0.76 +0.5 5,654,127 - AO353_25630 0.76 -0.5 5,654,210 + AO353_25630 0.84 +1.0 5,654,211 - AO353_25630 0.84 +2.9 5,654,416 + +1.9 5,654,416 + +1.1 5,654,416 + -0.0 5,654,416 + -1.2 5,654,416 + +1.0 5,654,497 + AO353_25635 0.13 -1.5 5,654,761 + AO353_25635 0.41 -1.5 5,654,761 + AO353_25635 0.41 +0.4 5,654,761 + AO353_25635 0.41 +1.1 5,654,761 + AO353_25635 0.41 -0.1 5,654,925 + AO353_25635 0.58 -0.5 5,654,925 + AO353_25635 0.58 -2.0 5,654,925 + AO353_25635 0.58 -0.9 5,654,926 - AO353_25635 0.58 -0.3 5,654,926 - AO353_25635 0.58 +0.0 5,654,926 - AO353_25635 0.58 -0.0 5,654,926 - AO353_25635 0.58 +1.0 5,654,926 - AO353_25635 0.58 +0.6 5,654,997 + AO353_25635 0.66 -0.5 5,654,997 + AO353_25635 0.66 +1.4 5,654,998 - AO353_25635 0.66 -0.5 5,655,172 + AO353_25635 0.85 -0.6 5,655,172 + AO353_25635 0.85 -0.5 5,655,173 - AO353_25635 0.85 -1.5 5,655,204 + AO353_25635 0.88 +1.1 5,655,204 + AO353_25635 0.88 -0.0 5,655,204 + AO353_25635 0.88 +0.8 5,655,204 + AO353_25635 0.88 +0.5 5,655,204 + AO353_25635 0.88 -0.5 5,655,204 + AO353_25635 0.88 +0.7 5,655,205 - AO353_25635 0.88 +1.5
Or see this region's nucleotide sequence