Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23040 and AO353_23045 are separated by 2 nucleotides AO353_23045 and AO353_23050 are separated by 171 nucleotides AO353_23050 and AO353_23055 are separated by 537 nucleotides
AO353_23040: AO353_23040 - saccharopine dehydrogenase, at 5,057,123 to 5,058,250
_23040
AO353_23045: AO353_23045 - hypothetical protein, at 5,058,253 to 5,058,744
_23045
AO353_23050: AO353_23050 - SAM-dependent methyltransferase, at 5,058,916 to 5,059,632
_23050
AO353_23055: AO353_23055 - methylmalonyl-CoA decarboxylase, at 5,060,170 to 5,060,970
_23055
Position (kb)
5058
5059
5060 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5057.980 kb on + strand, within AO353_23040 at 5057.980 kb on + strand, within AO353_23040 at 5057.980 kb on + strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5058.058 kb on + strand, within AO353_23040 at 5058.059 kb on - strand, within AO353_23040 at 5058.059 kb on - strand, within AO353_23040 at 5058.128 kb on + strand, within AO353_23040 at 5058.128 kb on + strand, within AO353_23040 at 5058.129 kb on - strand, within AO353_23040 at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.213 kb on + strand at 5058.213 kb on + strand at 5058.214 kb on - strand at 5058.214 kb on - strand at 5058.214 kb on - strand at 5058.226 kb on - strand at 5058.259 kb on + strand at 5058.259 kb on + strand at 5058.259 kb on + strand at 5058.260 kb on - strand at 5058.260 kb on - strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.275 kb on - strand at 5058.275 kb on - strand at 5058.275 kb on - strand at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.331 kb on + strand, within AO353_23045 at 5058.331 kb on + strand, within AO353_23045 at 5058.451 kb on + strand, within AO353_23045 at 5058.622 kb on + strand, within AO353_23045 at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.773 kb on - strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.887 kb on - strand at 5058.973 kb on + strand at 5058.991 kb on - strand, within AO353_23050 at 5059.006 kb on + strand, within AO353_23050 at 5059.006 kb on + strand, within AO353_23050 at 5059.007 kb on - strand, within AO353_23050 at 5059.007 kb on - strand, within AO353_23050 at 5059.076 kb on + strand, within AO353_23050 at 5059.077 kb on - strand, within AO353_23050 at 5059.077 kb on - strand, within AO353_23050 at 5059.113 kb on + strand, within AO353_23050 at 5059.113 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.274 kb on - strand, within AO353_23050 at 5059.274 kb on - strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.299 kb on - strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.399 kb on + strand, within AO353_23050 at 5059.399 kb on + strand, within AO353_23050 at 5059.400 kb on - strand, within AO353_23050 at 5059.400 kb on - strand, within AO353_23050 at 5059.405 kb on + strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.621 kb on - strand at 5059.621 kb on - strand at 5059.667 kb on + strand at 5059.668 kb on - strand at 5059.788 kb on + strand at 5059.788 kb on + strand at 5059.789 kb on - strand at 5059.806 kb on + strand at 5059.807 kb on - strand at 5059.807 kb on - strand at 5059.825 kb on + strand at 5059.825 kb on + strand at 5059.825 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.883 kb on - strand at 5059.883 kb on - strand at 5059.883 kb on - strand at 5059.914 kb on + strand at 5059.914 kb on + strand at 5059.915 kb on - strand at 5059.915 kb on - strand at 5059.949 kb on + strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5060.016 kb on - strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.033 kb on + strand at 5060.033 kb on + strand at 5060.123 kb on + strand at 5060.124 kb on - strand at 5060.134 kb on + strand at 5060.135 kb on - strand at 5060.135 kb on - strand at 5060.425 kb on + strand, within AO353_23055 at 5060.425 kb on + strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.538 kb on - strand, within AO353_23055
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,057,980 + AO353_23040 0.76 -0.4 5,057,980 + AO353_23040 0.76 +1.8 5,057,980 + AO353_23040 0.76 -1.2 5,057,981 - AO353_23040 0.76 +0.2 5,057,981 - AO353_23040 0.76 -1.7 5,057,981 - AO353_23040 0.76 +0.6 5,057,981 - AO353_23040 0.76 +1.6 5,057,993 + AO353_23040 0.77 +0.6 5,057,993 + AO353_23040 0.77 +1.0 5,057,993 + AO353_23040 0.77 -1.1 5,057,993 + AO353_23040 0.77 +1.6 5,057,994 - AO353_23040 0.77 -1.1 5,057,994 - AO353_23040 0.77 +0.1 5,057,994 - AO353_23040 0.77 +0.9 5,057,994 - AO353_23040 0.77 -0.4 5,057,994 - AO353_23040 0.77 +0.6 5,057,994 - AO353_23040 0.77 -1.4 5,057,994 - AO353_23040 0.77 +0.2 5,057,994 - AO353_23040 0.77 -0.4 5,058,058 + AO353_23040 0.83 -0.4 5,058,059 - AO353_23040 0.83 +2.4 5,058,059 - AO353_23040 0.83 +1.8 5,058,128 + AO353_23040 0.89 -2.0 5,058,128 + AO353_23040 0.89 -0.4 5,058,129 - AO353_23040 0.89 -0.4 5,058,182 + -0.4 5,058,182 + -1.2 5,058,182 + -1.4 5,058,182 + +0.6 5,058,182 + -0.4 5,058,182 + -0.4 5,058,183 - +0.4 5,058,183 - +0.3 5,058,183 - -0.4 5,058,183 - -0.8 5,058,183 - -1.0 5,058,183 - -0.1 5,058,213 + +0.9 5,058,213 + -0.2 5,058,214 - +1.3 5,058,214 - -0.5 5,058,214 - -1.8 5,058,226 - -1.1 5,058,259 + +0.3 5,058,259 + -1.0 5,058,259 + +0.1 5,058,260 - -1.7 5,058,260 - -2.0 5,058,274 + -1.2 5,058,274 + +0.2 5,058,274 + +1.4 5,058,274 + +0.6 5,058,274 + -1.4 5,058,274 + -2.0 5,058,274 + +0.6 5,058,274 + +0.1 5,058,275 - -0.7 5,058,275 - -0.8 5,058,275 - +0.8 5,058,325 + AO353_23045 0.15 +1.2 5,058,325 + AO353_23045 0.15 +1.2 5,058,325 + AO353_23045 0.15 +1.9 5,058,325 + AO353_23045 0.15 +0.6 5,058,325 + AO353_23045 0.15 +1.6 5,058,331 + AO353_23045 0.16 -0.4 5,058,331 + AO353_23045 0.16 +0.8 5,058,451 + AO353_23045 0.40 +0.6 5,058,622 + AO353_23045 0.75 -0.4 5,058,696 + -0.4 5,058,696 + +1.9 5,058,696 + +1.4 5,058,696 + +0.6 5,058,696 + +1.7 5,058,697 - -1.4 5,058,697 - -1.0 5,058,697 - +1.0 5,058,697 - -0.4 5,058,697 - -2.4 5,058,773 - +0.4 5,058,886 + -1.0 5,058,886 + +1.7 5,058,886 + +1.4 5,058,886 + +0.0 5,058,886 + +0.4 5,058,886 + -1.1 5,058,886 + -0.4 5,058,887 - +1.2 5,058,973 + -0.9 5,058,991 - AO353_23050 0.10 -0.4 5,059,006 + AO353_23050 0.13 -0.4 5,059,006 + AO353_23050 0.13 -0.1 5,059,007 - AO353_23050 0.13 +0.1 5,059,007 - AO353_23050 0.13 -0.8 5,059,076 + AO353_23050 0.22 +0.8 5,059,077 - AO353_23050 0.22 -0.4 5,059,077 - AO353_23050 0.22 -0.4 5,059,113 + AO353_23050 0.27 -1.0 5,059,113 + AO353_23050 0.27 +1.1 5,059,214 + AO353_23050 0.42 -0.4 5,059,214 + AO353_23050 0.42 +0.6 5,059,214 + AO353_23050 0.42 +0.6 5,059,215 - AO353_23050 0.42 -2.7 5,059,215 - AO353_23050 0.42 -1.4 5,059,215 - AO353_23050 0.42 +0.6 5,059,215 - AO353_23050 0.42 -0.6 5,059,273 + AO353_23050 0.50 -1.4 5,059,273 + AO353_23050 0.50 -1.4 5,059,273 + AO353_23050 0.50 -0.9 5,059,274 - AO353_23050 0.50 -2.0 5,059,274 - AO353_23050 0.50 -1.2 5,059,298 + AO353_23050 0.53 +0.1 5,059,298 + AO353_23050 0.53 -0.4 5,059,298 + AO353_23050 0.53 +0.0 5,059,299 - AO353_23050 0.53 -0.4 5,059,340 + AO353_23050 0.59 -0.2 5,059,340 + AO353_23050 0.59 -1.4 5,059,340 + AO353_23050 0.59 +0.0 5,059,340 + AO353_23050 0.59 -0.4 5,059,340 + AO353_23050 0.59 -0.8 5,059,340 + AO353_23050 0.59 +0.3 5,059,340 + AO353_23050 0.59 +1.0 5,059,341 - AO353_23050 0.59 +0.2 5,059,341 - AO353_23050 0.59 -0.8 5,059,341 - AO353_23050 0.59 +0.8 5,059,341 - AO353_23050 0.59 +0.6 5,059,361 + AO353_23050 0.62 -0.4 5,059,361 + AO353_23050 0.62 -1.4 5,059,361 + AO353_23050 0.62 +2.6 5,059,362 - AO353_23050 0.62 +0.2 5,059,362 - AO353_23050 0.62 -0.1 5,059,362 - AO353_23050 0.62 -0.4 5,059,399 + AO353_23050 0.67 -1.7 5,059,399 + AO353_23050 0.67 -0.7 5,059,400 - AO353_23050 0.68 -0.7 5,059,400 - AO353_23050 0.68 -0.9 5,059,405 + AO353_23050 0.68 -1.4 5,059,406 - AO353_23050 0.68 +1.3 5,059,406 - AO353_23050 0.68 +0.6 5,059,406 - AO353_23050 0.68 -2.0 5,059,406 - AO353_23050 0.68 +2.4 5,059,406 - AO353_23050 0.68 -0.4 5,059,620 + +0.9 5,059,620 + +0.9 5,059,620 + -0.4 5,059,620 + +0.0 5,059,621 - +1.4 5,059,621 - +1.2 5,059,667 + -0.3 5,059,668 - +0.2 5,059,788 + +1.6 5,059,788 + -1.0 5,059,789 - +1.3 5,059,806 + +0.2 5,059,807 - -0.1 5,059,807 - +0.2 5,059,825 + +0.6 5,059,825 + +0.6 5,059,825 + +0.2 5,059,882 + -1.7 5,059,882 + +0.1 5,059,882 + +0.4 5,059,882 + -0.4 5,059,882 + -0.4 5,059,883 - +1.2 5,059,883 - +1.2 5,059,883 - -0.7 5,059,914 + +1.2 5,059,914 + +0.6 5,059,915 - -0.7 5,059,915 - +0.0 5,059,949 + -2.0 5,059,950 - +2.2 5,059,950 - +0.6 5,059,950 - +1.6 5,059,950 - +0.6 5,059,957 - +0.6 5,059,957 - -1.1 5,059,957 - -0.6 5,059,957 - +0.6 5,059,995 + +0.0 5,059,995 + +0.6 5,059,995 + -0.4 5,059,995 + +1.2 5,059,995 + -0.4 5,059,995 + +0.0 5,059,995 + -0.1 5,059,995 + +0.6 5,059,995 + +0.8 5,059,995 + -0.4 5,059,996 - -0.4 5,059,996 - -0.2 5,059,996 - +0.6 5,059,996 - +0.2 5,059,996 - +0.6 5,059,996 - +1.0 5,059,996 - -0.4 5,059,996 - -1.4 5,060,016 - +0.6 5,060,031 + -0.1 5,060,031 + -1.4 5,060,031 + +0.2 5,060,032 - +0.6 5,060,032 - +0.6 5,060,032 - +0.3 5,060,033 + -0.4 5,060,033 + +1.6 5,060,123 + +0.0 5,060,124 - +2.4 5,060,134 + +0.9 5,060,135 - +1.2 5,060,135 - +0.6 5,060,425 + AO353_23055 0.32 -0.8 5,060,425 + AO353_23055 0.32 +0.1 5,060,426 - AO353_23055 0.32 +0.3 5,060,426 - AO353_23055 0.32 +0.0 5,060,426 - AO353_23055 0.32 -1.4 5,060,426 - AO353_23055 0.32 +0.8 5,060,426 - AO353_23055 0.32 -1.4 5,060,488 + AO353_23055 0.40 +0.2 5,060,488 + AO353_23055 0.40 +1.6 5,060,489 - AO353_23055 0.40 +1.2 5,060,489 - AO353_23055 0.40 -0.4 5,060,489 - AO353_23055 0.40 -0.8 5,060,537 + AO353_23055 0.46 -0.2 5,060,537 + AO353_23055 0.46 +1.4 5,060,537 + AO353_23055 0.46 +0.3 5,060,537 + AO353_23055 0.46 +1.9 5,060,538 - AO353_23055 0.46 +0.4
Or see this region's nucleotide sequence