Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20485

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_20475 and AO353_20480 are separated by 8 nucleotidesAO353_20480 and AO353_20485 are separated by 3 nucleotidesAO353_20485 and AO353_20490 are separated by 223 nucleotides AO353_20475: AO353_20475 - N-hydroxyarylamine O-acetyltransferase, at 4,497,282 to 4,498,121 _20475 AO353_20480: AO353_20480 - hypothetical protein, at 4,498,130 to 4,498,510 _20480 AO353_20485: AO353_20485 - hypothetical protein, at 4,498,514 to 4,498,795 _20485 AO353_20490: AO353_20490 - uracil permease, at 4,499,019 to 4,500,539 _20490 Position (kb) 4498 4499Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4497.524 kb on - strand, within AO353_20475at 4497.651 kb on + strand, within AO353_20475at 4497.651 kb on + strand, within AO353_20475at 4497.651 kb on + strand, within AO353_20475at 4497.652 kb on - strand, within AO353_20475at 4497.652 kb on - strand, within AO353_20475at 4497.707 kb on + strand, within AO353_20475at 4497.707 kb on + strand, within AO353_20475at 4497.768 kb on + strand, within AO353_20475at 4497.768 kb on + strand, within AO353_20475at 4497.769 kb on - strand, within AO353_20475at 4497.769 kb on - strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.810 kb on + strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.811 kb on - strand, within AO353_20475at 4497.846 kb on + strand, within AO353_20475at 4497.864 kb on + strand, within AO353_20475at 4497.864 kb on + strand, within AO353_20475at 4497.865 kb on - strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strand, within AO353_20475at 4497.957 kb on + strandat 4497.957 kb on + strand, within AO353_20475at 4497.958 kb on - strand, within AO353_20475at 4497.958 kb on - strand, within AO353_20475at 4497.958 kb on - strand, within AO353_20475at 4497.958 kb on - strand, within AO353_20475at 4497.958 kb on - strand, within AO353_20475at 4498.351 kb on + strand, within AO353_20480at 4498.351 kb on + strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.352 kb on - strand, within AO353_20480at 4498.412 kb on + strand, within AO353_20480at 4498.413 kb on - strand, within AO353_20480at 4498.413 kb on - strand, within AO353_20480at 4498.456 kb on + strand, within AO353_20480at 4498.456 kb on + strand, within AO353_20480at 4498.497 kb on + strandat 4498.498 kb on - strandat 4498.498 kb on - strandat 4498.593 kb on + strand, within AO353_20485at 4498.594 kb on - strand, within AO353_20485at 4498.594 kb on - strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.599 kb on + strand, within AO353_20485at 4498.600 kb on - strand, within AO353_20485at 4498.600 kb on - strand, within AO353_20485at 4498.600 kb on - strand, within AO353_20485at 4498.600 kb on - strand, within AO353_20485at 4498.600 kb on - strand, within AO353_20485at 4498.634 kb on - strand, within AO353_20485at 4498.698 kb on + strand, within AO353_20485at 4498.698 kb on + strand, within AO353_20485at 4498.698 kb on + strand, within AO353_20485at 4498.699 kb on - strand, within AO353_20485at 4498.763 kb on + strand, within AO353_20485at 4498.764 kb on - strand, within AO353_20485at 4498.773 kb on + strandat 4498.807 kb on + strandat 4498.807 kb on + strandat 4498.807 kb on + strandat 4498.808 kb on - strandat 4498.808 kb on - strandat 4498.810 kb on - strandat 4498.810 kb on - strandat 4498.810 kb on - strandat 4498.813 kb on + strandat 4498.814 kb on - strandat 4498.863 kb on + strandat 4498.863 kb on + strandat 4498.896 kb on + strandat 4498.896 kb on + strandat 4498.896 kb on + strandat 4498.896 kb on + strandat 4498.897 kb on - strandat 4498.897 kb on - strandat 4498.897 kb on - strandat 4498.897 kb on - strandat 4498.897 kb on - strandat 4498.897 kb on - strandat 4498.945 kb on + strandat 4499.081 kb on + strandat 4499.089 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.116 kb on - strandat 4499.134 kb on + strandat 4499.135 kb on - strandat 4499.417 kb on + strand, within AO353_20490at 4499.417 kb on + strand, within AO353_20490at 4499.417 kb on + strand, within AO353_20490at 4499.418 kb on - strand, within AO353_20490

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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4,497,524 - AO353_20475 0.29 +0.4
4,497,651 + AO353_20475 0.44 +1.4
4,497,651 + AO353_20475 0.44 +0.8
4,497,651 + AO353_20475 0.44 -0.2
4,497,652 - AO353_20475 0.44 -1.2
4,497,652 - AO353_20475 0.44 -2.0
4,497,707 + AO353_20475 0.51 -0.2
4,497,707 + AO353_20475 0.51 +0.3
4,497,768 + AO353_20475 0.58 +0.8
4,497,768 + AO353_20475 0.58 -0.6
4,497,769 - AO353_20475 0.58 -1.2
4,497,769 - AO353_20475 0.58 +1.8
4,497,810 + AO353_20475 0.63 -1.2
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 +0.1
4,497,810 + AO353_20475 0.63 +0.4
4,497,810 + AO353_20475 0.63 -0.8
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 +1.1
4,497,810 + AO353_20475 0.63 +0.8
4,497,810 + AO353_20475 0.63 -0.2
4,497,810 + AO353_20475 0.63 +0.8
4,497,810 + AO353_20475 0.63 -0.6
4,497,810 + AO353_20475 0.63 +0.8
4,497,810 + AO353_20475 0.63 +1.6
4,497,810 + AO353_20475 0.63 -2.6
4,497,810 + AO353_20475 0.63 +0.7
4,497,810 + AO353_20475 0.63 -1.8
4,497,811 - AO353_20475 0.63 +0.8
4,497,811 - AO353_20475 0.63 +1.0
4,497,811 - AO353_20475 0.63 -0.2
4,497,811 - AO353_20475 0.63 +0.5
4,497,811 - AO353_20475 0.63 +2.1
4,497,811 - AO353_20475 0.63 -1.8
4,497,811 - AO353_20475 0.63 +0.3
4,497,811 - AO353_20475 0.63 +0.2
4,497,846 + AO353_20475 0.67 -0.4
4,497,864 + AO353_20475 0.69 -0.9
4,497,864 + AO353_20475 0.69 -0.2
4,497,865 - AO353_20475 0.69 +0.1
4,497,957 + AO353_20475 0.80 -0.2
4,497,957 + AO353_20475 0.80 +0.3
4,497,957 + AO353_20475 0.80 -0.0
4,497,957 + AO353_20475 0.80 +0.6
4,497,957 + AO353_20475 0.80 -0.8
4,497,957 + AO353_20475 0.80 +1.8
4,497,957 + AO353_20475 0.80 +0.1
4,497,957 + AO353_20475 0.80 +1.4
4,497,957 + -0.2
4,497,957 + AO353_20475 0.80 -2.2
4,497,958 - AO353_20475 0.80 +1.1
4,497,958 - AO353_20475 0.80 -0.8
4,497,958 - AO353_20475 0.80 +1.4
4,497,958 - AO353_20475 0.80 -0.5
4,497,958 - AO353_20475 0.80 -0.2
4,498,351 + AO353_20480 0.58 +1.4
4,498,351 + AO353_20480 0.58 -0.2
4,498,352 - AO353_20480 0.58 -1.8
4,498,352 - AO353_20480 0.58 +0.7
4,498,352 - AO353_20480 0.58 +0.3
4,498,352 - AO353_20480 0.58 -0.5
4,498,352 - AO353_20480 0.58 +0.4
4,498,352 - AO353_20480 0.58 +0.3
4,498,352 - AO353_20480 0.58 +0.8
4,498,352 - AO353_20480 0.58 +0.6
4,498,412 + AO353_20480 0.74 +1.0
4,498,413 - AO353_20480 0.74 -0.5
4,498,413 - AO353_20480 0.74 +0.4
4,498,456 + AO353_20480 0.86 +0.6
4,498,456 + AO353_20480 0.86 +1.1
4,498,497 + +0.4
4,498,498 - +0.5
4,498,498 - -1.8
4,498,593 + AO353_20485 0.28 -1.8
4,498,594 - AO353_20485 0.28 -2.2
4,498,594 - AO353_20485 0.28 +0.6
4,498,599 + AO353_20485 0.30 +0.4
4,498,599 + AO353_20485 0.30 -2.8
4,498,599 + AO353_20485 0.30 -0.2
4,498,599 + AO353_20485 0.30 -0.2
4,498,599 + AO353_20485 0.30 +0.3
4,498,599 + AO353_20485 0.30 -0.2
4,498,600 - AO353_20485 0.30 +0.2
4,498,600 - AO353_20485 0.30 -1.2
4,498,600 - AO353_20485 0.30 -0.8
4,498,600 - AO353_20485 0.30 -0.4
4,498,600 - AO353_20485 0.30 +1.8
4,498,634 - AO353_20485 0.43 -1.8
4,498,698 + AO353_20485 0.65 -1.0
4,498,698 + AO353_20485 0.65 +0.6
4,498,698 + AO353_20485 0.65 -1.5
4,498,699 - AO353_20485 0.66 -0.6
4,498,763 + AO353_20485 0.88 -1.5
4,498,764 - AO353_20485 0.89 -0.2
4,498,773 + -1.5
4,498,807 + +2.0
4,498,807 + -0.2
4,498,807 + +1.9
4,498,808 - -1.2
4,498,808 - +2.4
4,498,810 - -1.2
4,498,810 - -2.8
4,498,810 - +0.8
4,498,813 + +0.8
4,498,814 - -2.2
4,498,863 + -0.4
4,498,863 + +0.8
4,498,896 + +1.4
4,498,896 + -0.2
4,498,896 + +1.4
4,498,896 + +0.5
4,498,897 - +0.1
4,498,897 - +1.1
4,498,897 - +0.8
4,498,897 - -0.2
4,498,897 - -0.7
4,498,897 - +0.4
4,498,945 + -0.8
4,499,081 + -0.4
4,499,089 - -0.5
4,499,116 - -0.0
4,499,116 - +1.1
4,499,116 - +1.5
4,499,116 - -0.5
4,499,116 - +0.1
4,499,116 - +0.4
4,499,116 - -1.8
4,499,116 - +2.4
4,499,116 - +1.8
4,499,116 - +1.4
4,499,116 - +2.1
4,499,116 - -0.2
4,499,134 + -0.2
4,499,135 - -0.6
4,499,417 + AO353_20490 0.26 +0.6
4,499,417 + AO353_20490 0.26 +1.4
4,499,417 + AO353_20490 0.26 +1.1
4,499,418 - AO353_20490 0.26 +0.4

Or see this region's nucleotide sequence