Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04775

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_04775 and AO353_04780 are separated by 56 nucleotides AO353_04775: AO353_04775 - hypothetical protein, at 1,053,156 to 1,053,683 _04775 AO353_04780: AO353_04780 - hypothetical protein, at 1,053,740 to 1,055,698 _04780 Position (kb) 1053 1054Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.205 kb on + strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.206 kb on - strandat 1052.222 kb on + strandat 1052.222 kb on + strandat 1052.223 kb on - strandat 1052.223 kb on - strandat 1052.223 kb on - strandat 1052.231 kb on + strandat 1052.232 kb on - strandat 1052.261 kb on + strandat 1052.294 kb on + strandat 1052.294 kb on + strandat 1052.295 kb on - strandat 1052.295 kb on - strandat 1052.295 kb on - strandat 1052.295 kb on - strandat 1052.295 kb on - strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.306 kb on + strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.307 kb on - strandat 1052.354 kb on + strandat 1052.439 kb on + strandat 1052.439 kb on + strandat 1052.439 kb on + strandat 1052.440 kb on - strandat 1052.482 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.547 kb on + strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.548 kb on - strandat 1052.566 kb on - strandat 1052.631 kb on - strandat 1052.642 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.706 kb on + strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.707 kb on - strandat 1052.771 kb on + strandat 1052.772 kb on - strandat 1052.778 kb on - strandat 1052.810 kb on - strandat 1052.904 kb on - strandat 1052.904 kb on - strandat 1053.027 kb on - strandat 1053.054 kb on - strandat 1053.089 kb on + strandat 1053.090 kb on - strandat 1053.090 kb on - strandat 1053.090 kb on - strandat 1053.115 kb on + strandat 1053.115 kb on + strandat 1053.147 kb on - strandat 1053.182 kb on + strandat 1053.254 kb on + strand, within AO353_04775at 1053.274 kb on - strand, within AO353_04775at 1053.282 kb on + strand, within AO353_04775at 1053.283 kb on - strand, within AO353_04775at 1053.283 kb on - strand, within AO353_04775at 1053.291 kb on - strand, within AO353_04775at 1053.308 kb on - strand, within AO353_04775at 1053.312 kb on - strand, within AO353_04775at 1053.424 kb on + strand, within AO353_04775at 1053.424 kb on + strand, within AO353_04775at 1053.424 kb on + strand, within AO353_04775at 1053.501 kb on + strand, within AO353_04775at 1053.524 kb on + strand, within AO353_04775at 1053.525 kb on - strand, within AO353_04775at 1053.527 kb on + strand, within AO353_04775at 1053.527 kb on + strand, within AO353_04775at 1053.528 kb on - strand, within AO353_04775at 1053.540 kb on + strandat 1053.734 kb on + strandat 1053.767 kb on - strandat 1053.783 kb on + strandat 1053.783 kb on + strandat 1053.783 kb on + strandat 1053.783 kb on + strandat 1053.784 kb on - strandat 1053.784 kb on - strandat 1053.785 kb on + strandat 1053.785 kb on + strandat 1053.785 kb on + strandat 1053.786 kb on - strandat 1053.786 kb on - strandat 1053.866 kb on - strandat 1053.866 kb on - strandat 1053.983 kb on - strand, within AO353_04780at 1053.983 kb on - strand, within AO353_04780at 1053.983 kb on - strand, within AO353_04780at 1054.006 kb on - strand, within AO353_04780at 1054.006 kb on - strand, within AO353_04780at 1054.006 kb on - strand, within AO353_04780at 1054.435 kb on + strand, within AO353_04780at 1054.435 kb on + strand, within AO353_04780at 1054.491 kb on - strand, within AO353_04780

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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1,052,205 + -0.4
1,052,205 + -2.4
1,052,205 + -0.4
1,052,205 + +1.7
1,052,205 + -0.4
1,052,205 + +0.7
1,052,205 + +1.7
1,052,205 + +0.2
1,052,205 + +0.2
1,052,205 + +0.4
1,052,205 + -0.8
1,052,205 + -0.5
1,052,205 + +0.2
1,052,205 + +0.6
1,052,205 + +0.2
1,052,205 + -0.6
1,052,205 + +0.2
1,052,205 + +2.5
1,052,206 - -0.2
1,052,206 - +1.2
1,052,206 - -2.4
1,052,206 - -0.8
1,052,206 - +0.6
1,052,206 - -1.3
1,052,206 - -1.8
1,052,206 - -0.3
1,052,206 - +0.4
1,052,206 - -0.3
1,052,206 - +0.2
1,052,206 - +0.7
1,052,206 - +1.0
1,052,222 + +0.4
1,052,222 + -1.2
1,052,223 - +0.6
1,052,223 - -1.4
1,052,223 - +0.2
1,052,231 + +0.7
1,052,232 - -1.3
1,052,261 + +0.7
1,052,294 + +1.2
1,052,294 + +2.5
1,052,295 - -0.3
1,052,295 - -1.0
1,052,295 - +0.3
1,052,295 - -0.8
1,052,295 - -0.8
1,052,306 + -0.4
1,052,306 + +1.7
1,052,306 + +1.2
1,052,306 + -0.8
1,052,306 + +1.7
1,052,306 + -0.8
1,052,306 + +1.0
1,052,306 + -0.4
1,052,306 + +1.7
1,052,306 + +1.2
1,052,306 + -1.8
1,052,306 + +0.2
1,052,306 + -0.4
1,052,307 - -0.6
1,052,307 - +1.2
1,052,307 - +1.7
1,052,307 - -0.2
1,052,307 - -0.4
1,052,307 - -0.2
1,052,307 - +0.2
1,052,307 - +0.2
1,052,307 - -1.4
1,052,307 - +0.2
1,052,354 + +1.0
1,052,439 + +1.7
1,052,439 + -0.6
1,052,439 + +0.9
1,052,440 - +2.2
1,052,482 + -0.4
1,052,547 + -0.8
1,052,547 + -0.1
1,052,547 + +0.2
1,052,547 + +1.6
1,052,547 + +0.2
1,052,547 + +0.7
1,052,547 + -0.2
1,052,547 + +0.2
1,052,547 + +0.6
1,052,547 + +2.5
1,052,547 + +0.7
1,052,547 + +0.7
1,052,547 + -1.4
1,052,548 - +0.9
1,052,548 - +0.2
1,052,548 - +0.2
1,052,548 - +0.3
1,052,548 - +0.2
1,052,548 - +1.7
1,052,548 - +1.5
1,052,548 - -0.1
1,052,548 - -0.7
1,052,548 - +0.3
1,052,548 - -0.3
1,052,566 - -0.4
1,052,631 - -0.4
1,052,642 + +0.6
1,052,706 + +0.2
1,052,706 + +2.2
1,052,706 + +0.2
1,052,706 + +0.2
1,052,706 + -0.8
1,052,706 + +0.6
1,052,706 + -0.1
1,052,707 - +2.7
1,052,707 - -1.4
1,052,707 - +1.0
1,052,707 - -0.8
1,052,707 - -0.6
1,052,707 - +1.2
1,052,707 - +1.2
1,052,707 - -0.5
1,052,707 - +1.7
1,052,707 - +0.9
1,052,771 + -0.8
1,052,772 - +1.4
1,052,778 - +2.5
1,052,810 - +1.7
1,052,904 - -0.4
1,052,904 - -2.2
1,053,027 - +0.7
1,053,054 - -0.4
1,053,089 + +0.6
1,053,090 - -1.8
1,053,090 - +1.0
1,053,090 - -0.8
1,053,115 + +0.7
1,053,115 + +0.2
1,053,147 - +0.9
1,053,182 + +0.0
1,053,254 + AO353_04775 0.19 +1.2
1,053,274 - AO353_04775 0.22 -0.4
1,053,282 + AO353_04775 0.24 +3.1
1,053,283 - AO353_04775 0.24 +0.9
1,053,283 - AO353_04775 0.24 -0.2
1,053,291 - AO353_04775 0.26 +0.2
1,053,308 - AO353_04775 0.29 +0.6
1,053,312 - AO353_04775 0.30 +3.6
1,053,424 + AO353_04775 0.51 +0.3
1,053,424 + AO353_04775 0.51 +1.3
1,053,424 + AO353_04775 0.51 +0.9
1,053,501 + AO353_04775 0.65 +0.2
1,053,524 + AO353_04775 0.70 +0.7
1,053,525 - AO353_04775 0.70 -0.4
1,053,527 + AO353_04775 0.70 -1.2
1,053,527 + AO353_04775 0.70 +1.7
1,053,528 - AO353_04775 0.70 +0.8
1,053,540 + -0.8
1,053,734 + +0.6
1,053,767 - +0.7
1,053,783 + +1.2
1,053,783 + -1.8
1,053,783 + +0.2
1,053,783 + -0.0
1,053,784 - +2.2
1,053,784 - +1.5
1,053,785 + -0.4
1,053,785 + -1.3
1,053,785 + +1.7
1,053,786 - +1.0
1,053,786 - +1.4
1,053,866 - +0.2
1,053,866 - +0.7
1,053,983 - AO353_04780 0.12 +0.2
1,053,983 - AO353_04780 0.12 +0.2
1,053,983 - AO353_04780 0.12 +1.5
1,054,006 - AO353_04780 0.14 -0.2
1,054,006 - AO353_04780 0.14 -1.4
1,054,006 - AO353_04780 0.14 +0.9
1,054,435 + AO353_04780 0.35 +0.6
1,054,435 + AO353_04780 0.35 +0.7
1,054,491 - AO353_04780 0.38 +1.1

Or see this region's nucleotide sequence