Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00235 and AO353_00240 are separated by 42 nucleotides AO353_00240 and AO353_00245 are separated by 141 nucleotides AO353_00245 and AO353_00250 are separated by 92 nucleotides AO353_00250 and AO353_00255 are separated by 29 nucleotides AO353_00255 and AO353_00260 overlap by 4 nucleotides AO353_00260 and AO353_00265 are separated by 72 nucleotides
AO353_00235: AO353_00235 - transcriptional regulator, at 44,569 to 44,826
_00235
AO353_00240: AO353_00240 - hypothetical protein, at 44,869 to 45,048
_00240
AO353_00245: AO353_00245 - XRE family transcriptional regulator, at 45,190 to 45,537
_00245
AO353_00250: AO353_00250 - hypothetical protein, at 45,630 to 45,830
_00250
AO353_00255: AO353_00255 - hypothetical protein, at 45,860 to 46,339
_00255
AO353_00260: AO353_00260 - hypothetical protein, at 46,336 to 46,701
_00260
AO353_00265: AO353_00265 - hypothetical protein, at 46,774 to 47,007
_00265
Position (kb) 45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 44.647 kb on + strand, within AO353_00235 at 44.647 kb on + strand, within AO353_00235 at 44.647 kb on + strand, within AO353_00235 at 44.647 kb on + strand, within AO353_00235 at 44.648 kb on - strand, within AO353_00235 at 44.648 kb on - strand, within AO353_00235 at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.092 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.095 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.148 kb on - strand at 45.192 kb on - strand at 45.604 kb on - strand at 45.604 kb on - strand at 45.604 kb on - strand at 45.630 kb on - strand at 45.630 kb on - strand at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.876 kb on + strand at 45.876 kb on + strand at 45.987 kb on - strand at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.075 kb on - strand, within AO353_00255 at 46.075 kb on - strand, within AO353_00255 at 46.086 kb on - strand, within AO353_00255 at 46.086 kb on - strand, within AO353_00255 at 46.102 kb on - strand, within AO353_00255 at 46.355 kb on + strand at 46.363 kb on + strand at 46.364 kb on - strand at 46.364 kb on - strand at 46.439 kb on + strand, within AO353_00260 at 46.439 kb on + strand, within AO353_00260 at 46.440 kb on - strand, within AO353_00260 at 46.477 kb on + strand, within AO353_00260 at 46.603 kb on - strand, within AO353_00260 at 46.603 kb on - strand, within AO353_00260 at 46.646 kb on - strand, within AO353_00260 at 46.646 kb on - strand, within AO353_00260 at 46.700 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 44,647 + AO353_00235 0.30 -0.2 44,647 + AO353_00235 0.30 -1.2 44,647 + AO353_00235 0.30 -1.8 44,647 + AO353_00235 0.30 +1.0 44,648 - AO353_00235 0.31 -0.2 44,648 - AO353_00235 0.31 -0.6 45,092 - -1.8 45,092 - -1.5 45,092 - +0.2 45,092 - +0.2 45,092 - -0.5 45,092 - -1.2 45,092 - +0.3 45,092 - -0.2 45,092 - -0.2 45,092 - +0.8 45,092 - +0.4 45,092 - +0.5 45,095 - -0.5 45,095 - -0.2 45,095 - -0.2 45,095 - +0.2 45,095 - +0.6 45,095 - +0.1 45,095 - +0.1 45,148 - +1.1 45,148 - +1.8 45,148 - +0.7 45,148 - -0.6 45,148 - -1.5 45,148 - -0.8 45,148 - +0.5 45,192 - +0.6 45,604 - -0.2 45,604 - -1.2 45,604 - -1.2 45,630 - +1.0 45,630 - +1.6 45,684 - AO353_00250 0.27 -0.4 45,684 - AO353_00250 0.27 -2.8 45,684 - AO353_00250 0.27 +0.2 45,684 - AO353_00250 0.27 +0.3 45,684 - AO353_00250 0.27 -1.8 45,684 - AO353_00250 0.27 -0.2 45,684 - AO353_00250 0.27 -0.5 45,684 - AO353_00250 0.27 -0.9 45,684 - AO353_00250 0.27 -0.2 45,854 + +1.5 45,854 + +0.8 45,854 + +0.8 45,854 + -1.2 45,854 + +0.2 45,854 + -0.2 45,854 + -0.2 45,855 - -0.4 45,855 - -0.2 45,855 - -1.2 45,855 - -0.8 45,855 - +0.8 45,855 - -0.2 45,855 - -1.0 45,855 - +0.8 45,855 - -0.0 45,855 - +0.5 45,876 + +1.3 45,876 + +0.8 45,987 - +0.4 46,071 - AO353_00255 0.44 -0.6 46,071 - AO353_00255 0.44 -1.6 46,071 - AO353_00255 0.44 +1.5 46,071 - AO353_00255 0.44 -0.2 46,071 - AO353_00255 0.44 +0.5 46,071 - AO353_00255 0.44 +1.4 46,071 - AO353_00255 0.44 -1.2 46,075 - AO353_00255 0.45 -0.6 46,075 - AO353_00255 0.45 +0.1 46,086 - AO353_00255 0.47 +1.4 46,086 - AO353_00255 0.47 -1.2 46,102 - AO353_00255 0.50 -0.8 46,355 + +0.2 46,363 + -0.6 46,364 - +0.8 46,364 - +0.8 46,439 + AO353_00260 0.28 -1.5 46,439 + AO353_00260 0.28 +0.8 46,440 - AO353_00260 0.28 +2.6 46,477 + AO353_00260 0.39 +1.4 46,603 - AO353_00260 0.73 +0.4 46,603 - AO353_00260 0.73 +1.8 46,646 - AO353_00260 0.85 +0.8 46,646 - AO353_00260 0.85 +2.1 46,700 - -2.0 46,714 - -1.2 46,714 - +0.8 46,714 - +0.8 46,714 - -0.5 46,714 - +0.8
Or see this region's nucleotide sequence