Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18095 and ABZR86_RS18100 are separated by 183 nucleotides ABZR86_RS18100 and ABZR86_RS18105 are separated by 10 nucleotides ABZR86_RS18105 and ABZR86_RS18110 are separated by 532 nucleotides
ABZR86_RS18095: ABZR86_RS18095 - bifunctional nicotinamidase/pyrazinamidase, at 33,678 to 34,328
_RS18095
ABZR86_RS18100: ABZR86_RS18100 - hypothetical protein, at 34,512 to 34,895
_RS18100
ABZR86_RS18105: ABZR86_RS18105 - prolyl oligopeptidase family serine peptidase, at 34,906 to 35,697
_RS18105
ABZR86_RS18110: ABZR86_RS18110 - LysR family transcriptional regulator, at 36,230 to 37,159
_RS18110
Position (kb) 34
35
36 Strain fitness (log2 ratio) -1
0
1
2 at 33.958 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.091 kb on - strand, within ABZR86_RS18095 at 34.365 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.491 kb on - strand at 34.507 kb on + strand at 34.507 kb on + strand at 34.508 kb on - strand at 34.518 kb on + strand at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.717 kb on - strand, within ABZR86_RS18100 at 34.725 kb on + strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.952 kb on - strand at 34.967 kb on + strand at 34.968 kb on - strand at 34.993 kb on + strand, within ABZR86_RS18105 at 34.993 kb on + strand, within ABZR86_RS18105 at 34.994 kb on - strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.013 kb on - strand, within ABZR86_RS18105 at 35.075 kb on - strand, within ABZR86_RS18105 at 35.141 kb on + strand, within ABZR86_RS18105 at 35.141 kb on + strand, within ABZR86_RS18105 at 35.312 kb on + strand, within ABZR86_RS18105 at 35.312 kb on + strand, within ABZR86_RS18105 at 35.313 kb on - strand, within ABZR86_RS18105 at 35.591 kb on + strand, within ABZR86_RS18105 at 35.591 kb on + strand, within ABZR86_RS18105 at 35.591 kb on + strand, within ABZR86_RS18105 at 35.592 kb on - strand, within ABZR86_RS18105 at 35.592 kb on - strand, within ABZR86_RS18105 at 35.592 kb on - strand, within ABZR86_RS18105 at 35.592 kb on - strand, within ABZR86_RS18105 at 35.593 kb on + strand, within ABZR86_RS18105 at 35.708 kb on + strand at 35.709 kb on - strand at 35.713 kb on + strand at 35.713 kb on + strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.714 kb on - strand at 35.775 kb on + strand at 35.775 kb on + strand at 35.775 kb on + strand at 35.775 kb on + strand at 35.776 kb on - strand at 35.776 kb on - strand at 35.776 kb on - strand at 35.905 kb on + strand at 35.905 kb on + strand at 35.905 kb on + strand at 35.906 kb on - strand at 35.946 kb on - strand at 36.096 kb on + strand at 36.096 kb on + strand at 36.152 kb on - strand at 36.152 kb on - strand at 36.152 kb on - strand at 36.225 kb on + strand at 36.226 kb on - strand at 36.330 kb on + strand, within ABZR86_RS18110 at 36.345 kb on + strand, within ABZR86_RS18110 at 36.346 kb on - strand, within ABZR86_RS18110 at 36.346 kb on - strand, within ABZR86_RS18110 at 36.346 kb on - strand, within ABZR86_RS18110 at 36.354 kb on + strand, within ABZR86_RS18110 at 36.354 kb on + strand, within ABZR86_RS18110 at 36.354 kb on + strand, within ABZR86_RS18110 at 36.354 kb on + strand, within ABZR86_RS18110 at 36.355 kb on - strand, within ABZR86_RS18110 at 36.355 kb on - strand, within ABZR86_RS18110 at 36.355 kb on - strand, within ABZR86_RS18110 at 36.355 kb on - strand, within ABZR86_RS18110 at 36.355 kb on - strand, within ABZR86_RS18110 at 36.648 kb on + strand, within ABZR86_RS18110 at 36.648 kb on + strand, within ABZR86_RS18110 at 36.648 kb on + strand, within ABZR86_RS18110 at 36.649 kb on - strand, within ABZR86_RS18110 at 36.665 kb on + strand, within ABZR86_RS18110 at 36.665 kb on + strand, within ABZR86_RS18110 at 36.675 kb on + strand, within ABZR86_RS18110 at 36.676 kb on - strand, within ABZR86_RS18110 at 36.676 kb on - strand, within ABZR86_RS18110 at 36.676 kb on - strand, within ABZR86_RS18110 at 36.676 kb on - strand, within ABZR86_RS18110 at 36.676 kb on - strand, within ABZR86_RS18110
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 33,958 + ABZR86_RS18095 0.43 -0.8 34,090 + ABZR86_RS18095 0.63 -0.4 34,090 + ABZR86_RS18095 0.63 -0.2 34,091 - ABZR86_RS18095 0.63 -0.2 34,365 + +0.8 34,475 + -0.4 34,475 + -0.1 34,475 + -0.4 34,476 - -0.1 34,476 - -0.1 34,476 - -0.7 34,476 - -0.0 34,476 - +0.6 34,476 - -0.3 34,491 - +0.3 34,507 + -0.1 34,507 + +0.8 34,508 - +0.4 34,518 + -0.9 34,600 - ABZR86_RS18100 0.23 +0.3 34,600 - ABZR86_RS18100 0.23 -0.7 34,600 - ABZR86_RS18100 0.23 +1.4 34,716 + ABZR86_RS18100 0.53 +0.6 34,716 + ABZR86_RS18100 0.53 +0.4 34,716 + ABZR86_RS18100 0.53 +0.8 34,717 - ABZR86_RS18100 0.53 -0.6 34,725 + ABZR86_RS18100 0.55 -0.6 34,726 - ABZR86_RS18100 0.56 +0.7 34,726 - ABZR86_RS18100 0.56 +0.2 34,726 - ABZR86_RS18100 0.56 +0.2 34,726 - ABZR86_RS18100 0.56 +0.5 34,726 - ABZR86_RS18100 0.56 +0.7 34,952 - -0.0 34,967 + +0.4 34,968 - +0.1 34,993 + ABZR86_RS18105 0.11 +0.1 34,993 + ABZR86_RS18105 0.11 -0.1 34,994 - ABZR86_RS18105 0.11 +0.7 35,012 + ABZR86_RS18105 0.13 -1.1 35,012 + ABZR86_RS18105 0.13 +0.2 35,012 + ABZR86_RS18105 0.13 -0.2 35,013 - ABZR86_RS18105 0.14 -0.2 35,075 - ABZR86_RS18105 0.21 -1.1 35,141 + ABZR86_RS18105 0.30 -0.5 35,141 + ABZR86_RS18105 0.30 +0.1 35,312 + ABZR86_RS18105 0.51 -0.0 35,312 + ABZR86_RS18105 0.51 -0.3 35,313 - ABZR86_RS18105 0.51 -1.6 35,591 + ABZR86_RS18105 0.86 +1.8 35,591 + ABZR86_RS18105 0.86 +0.9 35,591 + ABZR86_RS18105 0.86 +0.3 35,592 - ABZR86_RS18105 0.87 -0.3 35,592 - ABZR86_RS18105 0.87 -0.6 35,592 - ABZR86_RS18105 0.87 +0.1 35,592 - ABZR86_RS18105 0.87 -0.6 35,593 + ABZR86_RS18105 0.87 +0.2 35,708 + -0.8 35,709 - +0.3 35,713 + +0.4 35,713 + +0.6 35,714 - +0.6 35,714 - -0.1 35,714 - +0.3 35,714 - +0.2 35,714 - +1.4 35,714 - +0.8 35,714 - -0.2 35,714 - -0.3 35,775 + +1.8 35,775 + +0.4 35,775 + +0.4 35,775 + +0.0 35,776 - -0.3 35,776 - +0.2 35,776 - -0.4 35,905 + -0.2 35,905 + +0.3 35,905 + +0.6 35,906 - +0.2 35,946 - +0.5 36,096 + -0.1 36,096 + +0.3 36,152 - +0.2 36,152 - -0.2 36,152 - -0.2 36,225 + -0.8 36,226 - +0.9 36,330 + ABZR86_RS18110 0.11 +1.0 36,345 + ABZR86_RS18110 0.12 -0.2 36,346 - ABZR86_RS18110 0.12 +0.1 36,346 - ABZR86_RS18110 0.12 -0.1 36,346 - ABZR86_RS18110 0.12 +1.8 36,354 + ABZR86_RS18110 0.13 +0.3 36,354 + ABZR86_RS18110 0.13 -0.3 36,354 + ABZR86_RS18110 0.13 -0.5 36,354 + ABZR86_RS18110 0.13 -0.0 36,355 - ABZR86_RS18110 0.13 -0.1 36,355 - ABZR86_RS18110 0.13 +0.2 36,355 - ABZR86_RS18110 0.13 -0.6 36,355 - ABZR86_RS18110 0.13 +1.2 36,355 - ABZR86_RS18110 0.13 -0.1 36,648 + ABZR86_RS18110 0.45 -0.5 36,648 + ABZR86_RS18110 0.45 +0.5 36,648 + ABZR86_RS18110 0.45 +1.0 36,649 - ABZR86_RS18110 0.45 +0.7 36,665 + ABZR86_RS18110 0.47 +0.2 36,665 + ABZR86_RS18110 0.47 +0.2 36,675 + ABZR86_RS18110 0.48 -0.6 36,676 - ABZR86_RS18110 0.48 -0.4 36,676 - ABZR86_RS18110 0.48 -0.3 36,676 - ABZR86_RS18110 0.48 +0.1 36,676 - ABZR86_RS18110 0.48 -0.0 36,676 - ABZR86_RS18110 0.48 -0.0
Or see this region's nucleotide sequence