Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14625 and ABZR86_RS14630 are separated by 558 nucleotides ABZR86_RS14630 and ABZR86_RS14635 are separated by 899 nucleotides
ABZR86_RS14625: ABZR86_RS14625 - EF-hand domain-containing protein, at 3,270,624 to 3,270,935
_RS14625
ABZR86_RS14630: ABZR86_RS14630 - serine protease, at 3,271,494 to 3,273,470
_RS14630
ABZR86_RS14635: ABZR86_RS14635 - hypothetical protein, at 3,274,370 to 3,274,723
_RS14635
Position (kb)
3271
3272
3273
3274 Strain fitness (log2 ratio)
-1
0
1 at 3270.705 kb on + strand, within ABZR86_RS14625 at 3270.716 kb on + strand, within ABZR86_RS14625 at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.964 kb on - strand at 3271.477 kb on + strand at 3271.495 kb on + strand at 3271.496 kb on - strand at 3271.591 kb on + strand at 3271.591 kb on + strand at 3271.592 kb on - strand at 3271.596 kb on - strand at 3271.712 kb on - strand, within ABZR86_RS14630 at 3271.857 kb on + strand, within ABZR86_RS14630 at 3271.858 kb on - strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3272.053 kb on + strand, within ABZR86_RS14630 at 3272.089 kb on + strand, within ABZR86_RS14630 at 3272.152 kb on + strand, within ABZR86_RS14630 at 3272.152 kb on + strand, within ABZR86_RS14630 at 3272.153 kb on - strand, within ABZR86_RS14630 at 3272.227 kb on + strand, within ABZR86_RS14630 at 3272.422 kb on + strand, within ABZR86_RS14630 at 3272.639 kb on - strand, within ABZR86_RS14630 at 3272.795 kb on - strand, within ABZR86_RS14630 at 3272.950 kb on + strand, within ABZR86_RS14630 at 3273.001 kb on + strand, within ABZR86_RS14630 at 3273.001 kb on + strand, within ABZR86_RS14630 at 3273.124 kb on + strand, within ABZR86_RS14630 at 3273.124 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.304 kb on + strand at 3273.340 kb on - strand at 3273.488 kb on + strand at 3273.495 kb on - strand at 3274.270 kb on + strand at 3274.320 kb on + strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.366 kb on - strand at 3274.366 kb on - strand at 3274.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 3,270,705 + ABZR86_RS14625 0.26 -0.3 3,270,716 + ABZR86_RS14625 0.29 -0.5 3,270,961 - -0.1 3,270,961 - +0.1 3,270,961 - -0.5 3,270,964 - +0.0 3,271,477 + +0.5 3,271,495 + +0.1 3,271,496 - -0.6 3,271,591 + +0.0 3,271,591 + +0.5 3,271,592 - +0.8 3,271,596 - +1.1 3,271,712 - ABZR86_RS14630 0.11 -0.0 3,271,857 + ABZR86_RS14630 0.18 +0.5 3,271,858 - ABZR86_RS14630 0.18 -1.2 3,271,930 + ABZR86_RS14630 0.22 +0.2 3,271,930 + ABZR86_RS14630 0.22 -1.1 3,271,930 + ABZR86_RS14630 0.22 -0.8 3,272,053 + ABZR86_RS14630 0.28 -0.1 3,272,089 + ABZR86_RS14630 0.30 +0.1 3,272,152 + ABZR86_RS14630 0.33 -0.4 3,272,152 + ABZR86_RS14630 0.33 +0.6 3,272,153 - ABZR86_RS14630 0.33 -0.2 3,272,227 + ABZR86_RS14630 0.37 +0.1 3,272,422 + ABZR86_RS14630 0.47 -0.2 3,272,639 - ABZR86_RS14630 0.58 -0.4 3,272,795 - ABZR86_RS14630 0.66 -0.6 3,272,950 + ABZR86_RS14630 0.74 +0.4 3,273,001 + ABZR86_RS14630 0.76 -0.1 3,273,001 + ABZR86_RS14630 0.76 +0.3 3,273,124 + ABZR86_RS14630 0.82 -0.2 3,273,124 + ABZR86_RS14630 0.82 +0.1 3,273,250 + ABZR86_RS14630 0.89 +0.8 3,273,250 + ABZR86_RS14630 0.89 +0.0 3,273,250 + ABZR86_RS14630 0.89 +0.1 3,273,304 + +0.6 3,273,340 - -0.3 3,273,488 + +0.3 3,273,495 - +1.2 3,274,270 + +1.0 3,274,320 + -0.1 3,274,321 - +1.0 3,274,321 - -0.1 3,274,321 - +0.9 3,274,321 - -0.1 3,274,366 - -0.2 3,274,366 - +0.6 3,274,376 - -1.2
Or see this region's nucleotide sequence