Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13405

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,004,003	+				-0.6
3,004,003	+				+0.7
3,004,003	+				+0.8
3,004,003	+				+0.4
3,004,004	-				+0.5
3,004,004	-				-0.1
3,004,004	-				+0.8
3,004,004	-				-0.2
3,004,004	-				+0.2
3,004,004	-				-0.2
3,004,025	+				-0.5
3,004,026	-				-0.6
3,004,026	-				-0.1
3,004,026	-				-1.3
3,004,096	+		ABZR86_RS13400	0.10	-0.0
3,004,096	+		ABZR86_RS13400	0.10	+1.2
3,004,096	+		ABZR86_RS13400	0.10	+1.1
3,004,096	+		ABZR86_RS13400	0.10	-0.1
3,004,096	+		ABZR86_RS13400	0.10	-0.4
3,004,096	+		ABZR86_RS13400	0.10	-1.0
3,004,096	+		ABZR86_RS13400	0.10	-1.1
3,004,096	+		ABZR86_RS13400	0.10	+0.4
3,004,097	-		ABZR86_RS13400	0.10	+0.7
3,004,097	-		ABZR86_RS13400	0.10	-0.2
3,004,097	-		ABZR86_RS13400	0.10	+0.0
3,004,141	+		ABZR86_RS13400	0.16	-0.3
3,004,141	+		ABZR86_RS13400	0.16	-0.1
3,004,141	+		ABZR86_RS13400	0.16	+0.4
3,004,141	+		ABZR86_RS13400	0.16	+0.7
3,004,141	+		ABZR86_RS13400	0.16	+0.0
3,004,141	+		ABZR86_RS13400	0.16	+0.2
3,004,141	+		ABZR86_RS13400	0.16	+0.2
3,004,141	+		ABZR86_RS13400	0.16	-0.4
3,004,141	+		ABZR86_RS13400	0.16	-0.8
3,004,142	-		ABZR86_RS13400	0.16	-0.2
3,004,142	-		ABZR86_RS13400	0.16	+0.8
3,004,142	-		ABZR86_RS13400	0.16	-1.3
3,004,142	-		ABZR86_RS13400	0.16	+0.0
3,004,142	-		ABZR86_RS13400	0.16	-0.1
3,004,142	-		ABZR86_RS13400	0.16	+0.1
3,004,142	-		ABZR86_RS13400	0.16	+0.4
3,004,142	-		ABZR86_RS13400	0.16	+0.2
3,004,142	-		ABZR86_RS13400	0.16	+0.0
3,004,142	-		ABZR86_RS13400	0.16	-0.1
3,004,142	-		ABZR86_RS13400	0.16	-0.2
3,004,168	+		ABZR86_RS13400	0.19	-0.2
3,004,170	+		ABZR86_RS13400	0.19	-0.2
3,004,170	+		ABZR86_RS13400	0.19	+0.1
3,004,170	+		ABZR86_RS13400	0.19	-0.7
3,004,170	+		ABZR86_RS13400	0.19	-0.2
3,004,170	+		ABZR86_RS13400	0.19	+0.1
3,004,171	-		ABZR86_RS13400	0.19	+0.2
3,004,171	-		ABZR86_RS13400	0.19	-0.0
3,004,171	-		ABZR86_RS13400	0.19	+0.3
3,004,171	-		ABZR86_RS13400	0.19	+0.3
3,004,342	+		ABZR86_RS13400	0.41	-0.0
3,004,343	-		ABZR86_RS13400	0.41	+0.1
3,004,839	-				-0.0
3,004,876	-				+0.3
3,005,115	+		ABZR86_RS13405	0.12	+0.6
3,005,116	-		ABZR86_RS13405	0.12	+0.2
3,005,116	-		ABZR86_RS13405	0.12	+0.1
3,005,211	+		ABZR86_RS13405	0.17	+1.0
3,005,338	-		ABZR86_RS13405	0.24	-0.9
3,005,338	-		ABZR86_RS13405	0.24	+1.3
3,005,424	+		ABZR86_RS13405	0.28	-0.9
3,005,424	+		ABZR86_RS13405	0.28	-0.2
3,005,424	+		ABZR86_RS13405	0.28	-0.3
3,005,425	-		ABZR86_RS13405	0.28	-1.0
3,005,425	-		ABZR86_RS13405	0.28	-0.6
3,005,425	-		ABZR86_RS13405	0.28	-0.7
3,005,425	-		ABZR86_RS13405	0.28	+0.1
3,005,425	-		ABZR86_RS13405	0.28	+0.3
3,005,425	-		ABZR86_RS13405	0.28	-0.5
3,005,568	+		ABZR86_RS13405	0.36	-0.7
3,005,568	+		ABZR86_RS13405	0.36	+0.1
3,005,568	+		ABZR86_RS13405	0.36	+0.1
3,005,569	-		ABZR86_RS13405	0.36	-0.0
3,005,569	-		ABZR86_RS13405	0.36	-0.6
3,005,569	-		ABZR86_RS13405	0.36	-0.9
3,005,569	-		ABZR86_RS13405	0.36	+0.2
3,005,853	+		ABZR86_RS13405	0.51	+0.3
3,005,853	+		ABZR86_RS13405	0.51	-0.4
3,005,872	+		ABZR86_RS13405	0.52	+0.5
3,005,872	+		ABZR86_RS13405	0.52	+0.8
3,005,872	+		ABZR86_RS13405	0.52	+0.9
3,005,872	+		ABZR86_RS13405	0.52	+0.2
3,005,873	-		ABZR86_RS13405	0.52	-0.3
3,005,873	-		ABZR86_RS13405	0.52	-0.9
3,005,873	-		ABZR86_RS13405	0.52	+0.6
3,005,873	-		ABZR86_RS13405	0.52	-0.1
3,005,873	-		ABZR86_RS13405	0.52	+0.6
3,005,873	-		ABZR86_RS13405	0.52	-0.2
3,005,937	+		ABZR86_RS13405	0.56	+0.3
3,005,938	-		ABZR86_RS13405	0.56	-0.5
3,005,938	-		ABZR86_RS13405	0.56	-0.1
3,006,018	+		ABZR86_RS13405	0.60	-0.5
3,006,048	+		ABZR86_RS13405	0.62	+0.2
3,006,108	+		ABZR86_RS13405	0.65	-2.7
3,006,108	+		ABZR86_RS13405	0.65	-0.2
3,006,109	-		ABZR86_RS13405	0.65	+0.2
3,006,109	-		ABZR86_RS13405	0.65	-0.3
3,006,109	-		ABZR86_RS13405	0.65	+0.6
3,006,109	-		ABZR86_RS13405	0.65	-0.7
3,006,109	-		ABZR86_RS13405	0.65	-0.4
3,006,110	-		ABZR86_RS13405	0.65	-0.2
3,006,445	-		ABZR86_RS13405	0.83	-0.5
3,006,445	-		ABZR86_RS13405	0.83	-1.1
3,006,498	+		ABZR86_RS13405	0.86	+0.1
3,006,549	+		ABZR86_RS13405	0.88	+0.9
3,006,549	+		ABZR86_RS13405	0.88	+0.7
3,006,549	+		ABZR86_RS13405	0.88	+2.3
3,006,549	+		ABZR86_RS13405	0.88	+0.5
3,006,550	-		ABZR86_RS13405	0.88	+0.4
3,006,550	-		ABZR86_RS13405	0.88	-0.1
3,006,772	+				+0.3
3,006,772	+				+0.2
3,006,772	+				+0.2
3,006,773	-				-0.6
3,006,773	-				+0.5
3,006,773	-				-0.3
3,006,773	-				+0.5
3,006,773	-				+0.3
3,006,773	-				+0.1
3,006,773	-				-0.7
3,006,817	+				-0.4
3,006,855	+				+0.4
3,006,855	+				+0.2
3,006,856	-				+0.2
3,007,193	+		ABZR86_RS13410	0.31	+0.4
3,007,194	-		ABZR86_RS13410	0.31	-0.0
3,007,194	-		ABZR86_RS13410	0.31	-0.0
3,007,199	+		ABZR86_RS13410	0.31	-0.5
3,007,199	+		ABZR86_RS13410	0.31	+0.3
3,007,199	+		ABZR86_RS13410	0.31	-0.7
3,007,199	+		ABZR86_RS13410	0.31	+0.5
3,007,199	+		ABZR86_RS13410	0.31	+0.3
3,007,199	+		ABZR86_RS13410	0.31	+0.7
3,007,200	-		ABZR86_RS13410	0.31	-0.4
3,007,200	-		ABZR86_RS13410	0.31	+0.2
3,007,200	-		ABZR86_RS13410	0.31	-0.8
3,007,200	-		ABZR86_RS13410	0.31	+0.2
3,007,200	-		ABZR86_RS13410	0.31	+0.3
3,007,200	-		ABZR86_RS13410	0.31	+0.3
3,007,200	-		ABZR86_RS13410	0.31	+0.1
3,007,200	-		ABZR86_RS13410	0.31	-0.6
3,007,200	-		ABZR86_RS13410	0.31	+0.3
3,007,200	-		ABZR86_RS13410	0.31	+0.4
3,007,200	-		ABZR86_RS13410	0.31	+0.5
3,007,200	-		ABZR86_RS13410	0.31	+1.0
3,007,200	-		ABZR86_RS13410	0.31	-0.2
3,007,200	-		ABZR86_RS13410	0.31	-0.0
3,007,205	+		ABZR86_RS13410	0.32	-0.4
3,007,205	+		ABZR86_RS13410	0.32	+0.1
3,007,205	+		ABZR86_RS13410	0.32	+0.1
3,007,205	+		ABZR86_RS13410	0.32	-0.8
3,007,205	+		ABZR86_RS13410	0.32	+0.5
3,007,205	+		ABZR86_RS13410	0.32	-0.3
3,007,205	+		ABZR86_RS13410	0.32	-0.9
3,007,206	-		ABZR86_RS13410	0.32	+0.2
3,007,206	-		ABZR86_RS13410	0.32	-0.5
3,007,206	-		ABZR86_RS13410	0.32	+0.8
3,007,206	-		ABZR86_RS13410	0.32	-0.3
3,007,206	-		ABZR86_RS13410	0.32	+1.4
3,007,206	-		ABZR86_RS13410	0.32	-0.5
3,007,206	-		ABZR86_RS13410	0.32	-0.0
3,007,206	-		ABZR86_RS13410	0.32	+3.3
3,007,206	-		ABZR86_RS13410	0.32	-0.0
3,007,206	-		ABZR86_RS13410	0.32	-0.5
3,007,206	-		ABZR86_RS13410	0.32	+0.2
3,007,206	-		ABZR86_RS13410	0.32	-0.6
3,007,206	-		ABZR86_RS13410	0.32	+0.2
3,007,208	+		ABZR86_RS13410	0.32	-0.1
3,007,208	+		ABZR86_RS13410	0.32	-1.1
3,007,208	+		ABZR86_RS13410	0.32	+0.3
3,007,208	+		ABZR86_RS13410	0.32	+0.5
3,007,208	+		ABZR86_RS13410	0.32	+0.9
3,007,208	+		ABZR86_RS13410	0.32	+0.1
3,007,208	+		ABZR86_RS13410	0.32	+0.7
3,007,208	+		ABZR86_RS13410	0.32	-0.4
3,007,208	+		ABZR86_RS13410	0.32	+0.6
3,007,208	+		ABZR86_RS13410	0.32	-0.7
3,007,208	+		ABZR86_RS13410	0.32	-0.2
3,007,208	+		ABZR86_RS13410	0.32	+0.1
3,007,208	+		ABZR86_RS13410	0.32	-0.0
3,007,209	-		ABZR86_RS13410	0.32	+0.5
3,007,209	-		ABZR86_RS13410	0.32	-0.2
3,007,209	-		ABZR86_RS13410	0.32	+1.0
3,007,289	+		ABZR86_RS13410	0.40	-0.2
3,007,290	-		ABZR86_RS13410	0.40	-0.4
3,007,290	-		ABZR86_RS13410	0.40	+0.3
3,007,649	+		ABZR86_RS13410	0.76	+0.7