Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0894
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,076,706 | - | -1.6 | |||
1,076,706 | - | -0.1 | |||
1,076,934 | + | DvMF_0893 | 0.15 | -0.0 | |
1,076,934 | + | DvMF_0893 | 0.15 | -0.2 | |
1,076,960 | + | DvMF_0893 | 0.20 | +0.1 | |
1,076,982 | - | DvMF_0893 | 0.23 | -0.2 | |
1,076,992 | - | DvMF_0893 | 0.25 | +0.0 | |
1,077,168 | + | DvMF_0893 | 0.52 | +0.3 | |
1,077,247 | - | DvMF_0893 | 0.65 | -0.0 | |
1,077,487 | + | +0.4 | |||
1,077,601 | + | -0.3 | |||
1,077,725 | - | -1.0 | |||
1,077,981 | - | DvMF_0894 | 0.44 | -0.8 | |
1,077,981 | - | DvMF_0894 | 0.44 | -0.3 | |
1,078,236 | - | DvMF_0894 | 0.82 | -0.5 | |
1,078,608 | + | -1.3 | |||
1,078,692 | - | DvMF_0895 | 0.17 | -0.2 | |
1,078,743 | - | DvMF_0895 | 0.23 | -0.7 | |
1,078,790 | - | DvMF_0895 | 0.28 | -0.8 | |
1,078,828 | - | DvMF_0895 | 0.33 | -0.8 | |
1,078,976 | - | DvMF_0895 | 0.50 | -0.2 | |
1,079,027 | - | DvMF_0895 | 0.56 | -0.5 | |
1,079,075 | + | DvMF_0895 | 0.61 | -0.8 |
Or see this region's nucleotide sequence