Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0784

Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0783 and DvMF_0784 are separated by 260 nucleotidesDvMF_0784 and DvMF_0785 are separated by 217 nucleotides DvMF_0783: DvMF_0783 - Glucose/sorbosone dehydrogenase-like protein (RefSeq), at 940,523 to 941,923 _0783 DvMF_0784: DvMF_0784 - hypothetical protein (RefSeq), at 942,184 to 942,423 _0784 DvMF_0785: DvMF_0785 - hypothetical protein (RefSeq), at 942,641 to 943,018 _0785 Position (kb) 942 943Strain fitness (log2 ratio) -1 0 1at 941.241 kb on + strand, within DvMF_0783at 941.652 kb on - strand, within DvMF_0783at 941.778 kb on + strand, within DvMF_0783at 942.190 kb on + strandat 942.368 kb on - strand, within DvMF_0784at 942.625 kb on + strandat 942.685 kb on - strand, within DvMF_0785at 943.090 kb on + strandat 943.344 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml
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941,241 + DvMF_0783 0.51 -0.1
941,652 - DvMF_0783 0.81 -0.3
941,778 + DvMF_0783 0.90 -0.5
942,190 + -0.3
942,368 - DvMF_0784 0.77 -0.3
942,625 + -0.8
942,685 - DvMF_0785 0.12 -0.5
943,090 + -0.2
943,344 - -0.1

Or see this region's nucleotide sequence