Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0862 and Shew_0863 are separated by 1 nucleotides Shew_0863 and Shew_0864 are separated by 186 nucleotides
Shew_0862: Shew_0862 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 982,914 to 984,545
_0862
Shew_0863: Shew_0863 - ABC transporter-related protein (RefSeq), at 984,547 to 985,575
_0863
Shew_0864: Shew_0864 - Dyp-type peroxidase family protein (RefSeq), at 985,762 to 986,706
_0864
Position (kb) 984
985
986 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 983.860 kb on + strand, within Shew_0862 at 984.130 kb on + strand, within Shew_0862 at 984.223 kb on + strand, within Shew_0862 at 984.560 kb on + strand at 984.608 kb on + strand at 984.616 kb on - strand at 984.902 kb on - strand, within Shew_0863 at 984.951 kb on - strand, within Shew_0863 at 985.096 kb on - strand, within Shew_0863 at 985.096 kb on - strand, within Shew_0863 at 985.170 kb on + strand, within Shew_0863 at 985.192 kb on + strand, within Shew_0863 at 985.212 kb on + strand, within Shew_0863 at 985.282 kb on - strand, within Shew_0863 at 985.321 kb on + strand, within Shew_0863 at 985.421 kb on - strand, within Shew_0863 at 985.424 kb on + strand, within Shew_0863 at 985.430 kb on - strand, within Shew_0863 at 985.569 kb on + strand at 985.577 kb on - strand at 985.577 kb on - strand at 985.740 kb on - strand at 985.784 kb on + strand at 986.004 kb on + strand, within Shew_0864
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 983,860 + Shew_0862 0.58 -0.1 984,130 + Shew_0862 0.75 -0.5 984,223 + Shew_0862 0.80 +0.1 984,560 + +2.2 984,608 + +1.2 984,616 - -1.2 984,902 - Shew_0863 0.34 -0.9 984,951 - Shew_0863 0.39 -0.6 985,096 - Shew_0863 0.53 -1.1 985,096 - Shew_0863 0.53 -1.0 985,170 + Shew_0863 0.61 +1.1 985,192 + Shew_0863 0.63 +1.2 985,212 + Shew_0863 0.65 +0.8 985,282 - Shew_0863 0.71 -2.9 985,321 + Shew_0863 0.75 +1.8 985,421 - Shew_0863 0.85 -0.2 985,424 + Shew_0863 0.85 +6.0 985,430 - Shew_0863 0.86 +0.1 985,569 + +2.6 985,577 - -2.4 985,577 - -0.7 985,740 - -1.4 985,784 + -0.4 986,004 + Shew_0864 0.26 -1.0
Or see this region's nucleotide sequence