Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32390 and AZOBR_RS32395 overlap by 4 nucleotides AZOBR_RS32395 and AZOBR_RS32400 are separated by 64 nucleotides AZOBR_RS32400 and AZOBR_RS32405 are separated by 28 nucleotides
AZOBR_RS32390: AZOBR_RS32390 - amidohydrolase, at 633,927 to 635,126
_RS32390
AZOBR_RS32395: AZOBR_RS32395 - 2-amino-thiazoline-4-carboxylic acid hydrolase, at 635,123 to 635,611
_RS32395
AZOBR_RS32400: AZOBR_RS32400 - leucine/isoleucine/valine transporter ATP-binding subunit, at 635,676 to 636,374
_RS32400
AZOBR_RS32405: AZOBR_RS32405 - ABC transporter, at 636,403 to 637,170
_RS32405
Position (kb) 635
636 Strain fitness (log2 ratio) -2
-1
0
1 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 635.689 kb on + strand at 635.689 kb on + strand at 635.767 kb on + strand, within AZOBR_RS32400 at 635.767 kb on + strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 636.223 kb on + strand, within AZOBR_RS32400 at 636.223 kb on + strand, within AZOBR_RS32400 at 636.223 kb on + strand, within AZOBR_RS32400 at 636.224 kb on - strand, within AZOBR_RS32400 at 636.224 kb on - strand, within AZOBR_RS32400 at 636.224 kb on - strand, within AZOBR_RS32400 at 636.432 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 634,235 - AZOBR_RS32390 0.26 -0.0 634,235 - AZOBR_RS32390 0.26 -0.1 634,558 + AZOBR_RS32390 0.53 -0.0 634,558 + AZOBR_RS32390 0.53 +0.2 634,558 + AZOBR_RS32390 0.53 -0.5 634,559 - AZOBR_RS32390 0.53 +1.1 634,559 - AZOBR_RS32390 0.53 +0.1 634,559 - AZOBR_RS32390 0.53 -0.1 635,689 + -0.7 635,689 + +0.2 635,767 + AZOBR_RS32400 0.13 +0.2 635,767 + AZOBR_RS32400 0.13 -0.2 635,768 - AZOBR_RS32400 0.13 +0.1 635,768 - AZOBR_RS32400 0.13 -0.1 635,768 - AZOBR_RS32400 0.13 -0.0 635,768 - AZOBR_RS32400 0.13 -2.6 635,768 - AZOBR_RS32400 0.13 +0.7 635,768 - AZOBR_RS32400 0.13 +0.0 635,768 - AZOBR_RS32400 0.13 +0.7 635,768 - AZOBR_RS32400 0.13 +0.3 636,223 + AZOBR_RS32400 0.78 +0.2 636,223 + AZOBR_RS32400 0.78 +0.1 636,223 + AZOBR_RS32400 0.78 +0.2 636,224 - AZOBR_RS32400 0.78 -0.4 636,224 - AZOBR_RS32400 0.78 +0.3 636,224 - AZOBR_RS32400 0.78 -0.5 636,432 - +0.4
Or see this region's nucleotide sequence