Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23905 and AO353_23910 are separated by 2 nucleotides AO353_23910 and AO353_23915 are separated by 179 nucleotides
AO353_23905: AO353_23905 - GntR family transcriptional regulator, at 5,245,604 to 5,246,482
_23905
AO353_23910: AO353_23910 - response regulator, at 5,246,485 to 5,246,847
_23910
AO353_23915: AO353_23915 - chemotaxis protein CheY, at 5,247,027 to 5,250,494
_23915
Position (kb) 5246
5247 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.500 kb on - strand at 5245.530 kb on + strand at 5245.540 kb on + strand at 5245.540 kb on + strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.674 kb on + strand at 5245.675 kb on - strand at 5245.758 kb on - strand at 5245.758 kb on - strand, within AO353_23905 at 5245.817 kb on - strand, within AO353_23905 at 5245.877 kb on + strand, within AO353_23905 at 5245.877 kb on + strand, within AO353_23905 at 5245.878 kb on - strand, within AO353_23905 at 5246.244 kb on + strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.266 kb on + strand, within AO353_23905 at 5246.266 kb on + strand, within AO353_23905 at 5246.267 kb on - strand, within AO353_23905 at 5246.326 kb on + strand, within AO353_23905 at 5246.327 kb on - strand, within AO353_23905 at 5246.452 kb on + strand at 5246.452 kb on + strand at 5246.494 kb on - strand at 5246.575 kb on - strand, within AO353_23910 at 5246.575 kb on - strand, within AO353_23910 at 5246.575 kb on - strand, within AO353_23910 at 5246.777 kb on - strand, within AO353_23910 at 5246.777 kb on - strand, within AO353_23910 at 5246.805 kb on + strand, within AO353_23910 at 5246.806 kb on - strand, within AO353_23910 at 5246.819 kb on - strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.961 kb on + strand at 5246.962 kb on - strand at 5247.003 kb on - strand at 5247.003 kb on - strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.409 kb on - strand, within AO353_23915 at 5247.510 kb on + strand, within AO353_23915 at 5247.510 kb on + strand, within AO353_23915 at 5247.511 kb on - strand, within AO353_23915 at 5247.597 kb on + strand, within AO353_23915 at 5247.598 kb on - strand, within AO353_23915 at 5247.636 kb on + strand, within AO353_23915 at 5247.637 kb on - strand, within AO353_23915 at 5247.637 kb on - strand, within AO353_23915 at 5247.637 kb on - strand, within AO353_23915 at 5247.676 kb on - strand, within AO353_23915 at 5247.676 kb on - strand, within AO353_23915 at 5247.788 kb on - strand, within AO353_23915 at 5247.806 kb on + strand, within AO353_23915 at 5247.806 kb on + strand, within AO353_23915 at 5247.806 kb on + strand, within AO353_23915
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,245,499 + -0.2 5,245,499 + -1.5 5,245,499 + -1.0 5,245,499 + -0.9 5,245,500 - -0.5 5,245,530 + +1.4 5,245,540 + +0.2 5,245,540 + -0.5 5,245,541 - +1.4 5,245,541 - -0.5 5,245,541 - +1.1 5,245,541 - +0.3 5,245,541 - +1.1 5,245,674 + -0.5 5,245,675 - -1.0 5,245,758 - -1.5 5,245,758 - AO353_23905 0.18 -0.5 5,245,817 - AO353_23905 0.24 +0.4 5,245,877 + AO353_23905 0.31 +0.9 5,245,877 + AO353_23905 0.31 +1.1 5,245,878 - AO353_23905 0.31 +1.1 5,246,244 + AO353_23905 0.73 +1.1 5,246,245 - AO353_23905 0.73 -1.5 5,246,245 - AO353_23905 0.73 +0.9 5,246,245 - AO353_23905 0.73 -0.9 5,246,266 + AO353_23905 0.75 -0.3 5,246,266 + AO353_23905 0.75 -0.5 5,246,267 - AO353_23905 0.75 -1.8 5,246,326 + AO353_23905 0.82 -0.5 5,246,327 - AO353_23905 0.82 -0.8 5,246,452 + -1.3 5,246,452 + -0.5 5,246,494 - +1.7 5,246,575 - AO353_23910 0.25 -0.8 5,246,575 - AO353_23910 0.25 -0.5 5,246,575 - AO353_23910 0.25 -0.9 5,246,777 - AO353_23910 0.80 +0.8 5,246,777 - AO353_23910 0.80 -0.3 5,246,805 + AO353_23910 0.88 -1.5 5,246,806 - AO353_23910 0.88 -0.5 5,246,819 - -0.5 5,246,891 + +2.1 5,246,891 + -0.9 5,246,891 + -2.5 5,246,891 + -0.2 5,246,891 + +0.1 5,246,891 + +0.9 5,246,892 - -0.5 5,246,892 - -0.5 5,246,892 - -1.2 5,246,892 - -0.3 5,246,961 + -3.0 5,246,962 - +0.3 5,247,003 - -0.0 5,247,003 - -0.5 5,247,144 + +1.1 5,247,144 + +0.7 5,247,144 + +1.1 5,247,144 + +0.5 5,247,144 + +0.5 5,247,144 + +2.4 5,247,144 + -0.5 5,247,144 + -0.5 5,247,145 - +0.7 5,247,145 - +1.1 5,247,145 - +2.4 5,247,145 - +0.9 5,247,145 - +1.5 5,247,145 - -0.0 5,247,409 - AO353_23915 0.11 +1.9 5,247,510 + AO353_23915 0.14 -1.8 5,247,510 + AO353_23915 0.14 +0.5 5,247,511 - AO353_23915 0.14 -0.5 5,247,597 + AO353_23915 0.16 +1.0 5,247,598 - AO353_23915 0.16 +0.5 5,247,636 + AO353_23915 0.18 -2.0 5,247,637 - AO353_23915 0.18 +1.1 5,247,637 - AO353_23915 0.18 +1.1 5,247,637 - AO353_23915 0.18 +0.1 5,247,676 - AO353_23915 0.19 -0.5 5,247,676 - AO353_23915 0.19 -0.0 5,247,788 - AO353_23915 0.22 +0.5 5,247,806 + AO353_23915 0.22 +1.5 5,247,806 + AO353_23915 0.22 +1.1 5,247,806 + AO353_23915 0.22 -1.5
Or see this region's nucleotide sequence