Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23285 and AO353_23290 are separated by 298 nucleotides AO353_23290 and AO353_23295 overlap by 4 nucleotides
AO353_23285: AO353_23285 - hypothetical protein, at 5,107,269 to 5,107,628
_23285
AO353_23290: AO353_23290 - cystathionine beta-synthase, at 5,107,927 to 5,109,303
_23290
AO353_23295: AO353_23295 - cystathionine beta-lyase, at 5,109,300 to 5,110,478
_23295
Position (kb)
5107
5108
5109
5110 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5106.928 kb on + strand at 5106.977 kb on - strand at 5107.098 kb on + strand at 5107.098 kb on + strand at 5107.123 kb on + strand at 5107.187 kb on + strand at 5107.187 kb on + strand at 5107.188 kb on - strand at 5107.188 kb on - strand at 5107.191 kb on + strand at 5107.191 kb on + strand at 5107.191 kb on + strand at 5107.192 kb on - strand at 5107.192 kb on - strand at 5107.192 kb on - strand at 5107.192 kb on - strand at 5107.291 kb on + strand at 5107.291 kb on + strand at 5107.291 kb on + strand at 5107.466 kb on + strand, within AO353_23285 at 5107.467 kb on - strand, within AO353_23285 at 5107.467 kb on - strand, within AO353_23285 at 5107.467 kb on - strand, within AO353_23285 at 5107.539 kb on - strand, within AO353_23285 at 5107.541 kb on - strand, within AO353_23285 at 5107.601 kb on + strand at 5107.602 kb on - strand at 5107.704 kb on + strand at 5107.704 kb on + strand at 5107.705 kb on - strand at 5107.705 kb on - strand at 5107.747 kb on + strand at 5107.832 kb on + strand at 5107.833 kb on - strand at 5107.833 kb on - strand at 5107.971 kb on + strand at 5108.227 kb on - strand, within AO353_23290 at 5108.309 kb on - strand, within AO353_23290 at 5108.312 kb on - strand, within AO353_23290 at 5108.573 kb on - strand, within AO353_23290 at 5108.678 kb on - strand, within AO353_23290 at 5108.760 kb on + strand, within AO353_23290 at 5108.760 kb on + strand, within AO353_23290 at 5108.761 kb on - strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5109.085 kb on - strand, within AO353_23290 at 5109.123 kb on + strand, within AO353_23290 at 5109.124 kb on - strand, within AO353_23290 at 5109.124 kb on - strand, within AO353_23290 at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.298 kb on - strand at 5109.298 kb on - strand at 5109.406 kb on - strand at 5109.406 kb on - strand at 5109.406 kb on - strand at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.442 kb on + strand, within AO353_23295 at 5109.443 kb on - strand, within AO353_23295 at 5109.460 kb on - strand, within AO353_23295 at 5109.621 kb on + strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.866 kb on - strand, within AO353_23295 at 5109.918 kb on + strand, within AO353_23295 at 5110.152 kb on + strand, within AO353_23295 at 5110.152 kb on + strand, within AO353_23295 at 5110.153 kb on - strand, within AO353_23295 at 5110.153 kb on - strand, within AO353_23295
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,106,928 + -2.7 5,106,977 - -0.4 5,107,098 + +0.4 5,107,098 + -1.0 5,107,123 + +0.7 5,107,187 + -2.0 5,107,187 + -1.4 5,107,188 - -0.4 5,107,188 - +0.9 5,107,191 + +0.6 5,107,191 + -1.0 5,107,191 + -0.4 5,107,192 - +0.2 5,107,192 - +0.7 5,107,192 - +1.2 5,107,192 - +1.2 5,107,291 + -0.0 5,107,291 + -0.4 5,107,291 + +0.4 5,107,466 + AO353_23285 0.55 +1.2 5,107,467 - AO353_23285 0.55 -1.2 5,107,467 - AO353_23285 0.55 -1.4 5,107,467 - AO353_23285 0.55 +0.8 5,107,539 - AO353_23285 0.75 +1.2 5,107,541 - AO353_23285 0.76 +0.3 5,107,601 + +1.7 5,107,602 - +0.8 5,107,704 + -1.4 5,107,704 + +0.8 5,107,705 - +0.9 5,107,705 - +0.3 5,107,747 + -0.4 5,107,832 + -0.4 5,107,833 - -2.4 5,107,833 - -0.4 5,107,971 + -1.7 5,108,227 - AO353_23290 0.22 +0.8 5,108,309 - AO353_23290 0.28 +0.6 5,108,312 - AO353_23290 0.28 -0.8 5,108,573 - AO353_23290 0.47 +1.0 5,108,678 - AO353_23290 0.55 +0.6 5,108,760 + AO353_23290 0.60 -0.4 5,108,760 + AO353_23290 0.60 +1.3 5,108,761 - AO353_23290 0.61 +1.7 5,108,863 + AO353_23290 0.68 -0.7 5,108,863 + AO353_23290 0.68 +1.6 5,108,863 + AO353_23290 0.68 -0.4 5,108,863 + AO353_23290 0.68 +1.9 5,108,863 + AO353_23290 0.68 -1.4 5,108,864 - AO353_23290 0.68 +0.9 5,108,864 - AO353_23290 0.68 -0.4 5,108,864 - AO353_23290 0.68 -0.4 5,109,085 - AO353_23290 0.84 +1.4 5,109,123 + AO353_23290 0.87 +0.7 5,109,124 - AO353_23290 0.87 +1.9 5,109,124 - AO353_23290 0.87 +0.2 5,109,297 + -1.7 5,109,297 + -0.0 5,109,297 + -1.0 5,109,297 + +0.7 5,109,297 + -0.0 5,109,298 - -1.2 5,109,298 - +1.2 5,109,406 - -1.4 5,109,406 - -1.0 5,109,406 - +0.7 5,109,420 + AO353_23295 0.10 -0.7 5,109,420 + AO353_23295 0.10 +0.6 5,109,420 + AO353_23295 0.10 +1.4 5,109,420 + AO353_23295 0.10 -0.4 5,109,442 + AO353_23295 0.12 -0.0 5,109,443 - AO353_23295 0.12 -0.4 5,109,460 - AO353_23295 0.14 +0.6 5,109,621 + AO353_23295 0.27 +0.8 5,109,622 - AO353_23295 0.27 +0.1 5,109,622 - AO353_23295 0.27 -0.4 5,109,622 - AO353_23295 0.27 +1.3 5,109,866 - AO353_23295 0.48 +0.2 5,109,918 + AO353_23295 0.52 -1.4 5,110,152 + AO353_23295 0.72 -1.0 5,110,152 + AO353_23295 0.72 +0.9 5,110,153 - AO353_23295 0.72 -0.5 5,110,153 - AO353_23295 0.72 +2.2
Or see this region's nucleotide sequence