Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23145 and AO353_23150 overlap by 8 nucleotides AO353_23150 and AO353_23155 are separated by 1 nucleotides AO353_23155 and AO353_23160 overlap by 10 nucleotides AO353_23160 and AO353_23165 are separated by 4 nucleotides
AO353_23145: AO353_23145 - hypothetical protein, at 5,078,916 to 5,080,598
_23145
AO353_23150: AO353_23150 - short-chain dehydrogenase, at 5,080,591 to 5,081,388
_23150
AO353_23155: AO353_23155 - IclR family transcriptional regulator, at 5,081,390 to 5,082,232
_23155
AO353_23160: AO353_23160 - hydrolase, at 5,082,223 to 5,083,107
_23160
AO353_23165: AO353_23165 - cupin, at 5,083,112 to 5,083,675
_23165
Position (kb) 5081
5082
5083 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5080.408 kb on + strand, within AO353_23145 at 5080.408 kb on + strand, within AO353_23145 at 5080.408 kb on + strand, within AO353_23145 at 5080.409 kb on - strand, within AO353_23145 at 5080.409 kb on - strand, within AO353_23145 at 5080.583 kb on + strand at 5080.583 kb on + strand at 5080.583 kb on + strand at 5080.584 kb on - strand at 5080.584 kb on - strand at 5080.593 kb on - strand at 5080.593 kb on - strand at 5080.643 kb on + strand at 5080.643 kb on + strand at 5081.379 kb on - strand at 5081.448 kb on + strand at 5081.448 kb on + strand at 5081.449 kb on - strand at 5081.564 kb on - strand, within AO353_23155 at 5081.564 kb on - strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.973 kb on + strand, within AO353_23155 at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.227 kb on - strand at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.866 kb on + strand, within AO353_23160 at 5082.925 kb on + strand, within AO353_23160 at 5083.113 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,080,408 + AO353_23145 0.89 -0.4 5,080,408 + AO353_23145 0.89 -2.0 5,080,408 + AO353_23145 0.89 +1.2 5,080,409 - AO353_23145 0.89 +0.6 5,080,409 - AO353_23145 0.89 -0.7 5,080,583 + +1.2 5,080,583 + -0.0 5,080,583 + +0.2 5,080,584 - -0.4 5,080,584 - +0.1 5,080,593 - -0.4 5,080,593 - -1.2 5,080,643 + -1.4 5,080,643 + +0.6 5,081,379 - -0.4 5,081,448 + +0.6 5,081,448 + +0.6 5,081,449 - -0.8 5,081,564 - AO353_23155 0.21 -1.8 5,081,564 - AO353_23155 0.21 -1.0 5,081,862 + AO353_23155 0.56 -1.4 5,081,862 + AO353_23155 0.56 -0.4 5,081,862 + AO353_23155 0.56 +2.9 5,081,862 + AO353_23155 0.56 -0.7 5,081,863 - AO353_23155 0.56 -0.4 5,081,863 - AO353_23155 0.56 +0.9 5,081,863 - -0.4 5,081,863 - AO353_23155 0.56 +2.2 5,081,863 - AO353_23155 0.56 +1.2 5,081,973 + AO353_23155 0.69 -0.4 5,082,186 + +0.2 5,082,186 + +0.6 5,082,186 + -0.8 5,082,186 + +0.6 5,082,186 + +1.4 5,082,186 + -0.4 5,082,186 + +0.6 5,082,186 + -2.7 5,082,186 + +0.6 5,082,186 + +1.2 5,082,186 + +0.9 5,082,186 + +1.9 5,082,187 - -0.4 5,082,187 - +0.8 5,082,187 - +1.8 5,082,187 - -1.1 5,082,187 - +0.4 5,082,187 - -0.4 5,082,187 - -0.8 5,082,187 - -0.2 5,082,227 - +1.6 5,082,466 + AO353_23160 0.27 +0.6 5,082,466 + AO353_23160 0.27 +0.6 5,082,466 + AO353_23160 0.27 +0.6 5,082,466 + AO353_23160 0.27 +0.6 5,082,466 + AO353_23160 0.27 +0.9 5,082,466 + AO353_23160 0.27 +0.4 5,082,466 + AO353_23160 0.27 -1.0 5,082,467 - AO353_23160 0.28 -0.8 5,082,467 - AO353_23160 0.28 +2.1 5,082,558 - AO353_23160 0.38 +0.2 5,082,558 - AO353_23160 0.38 +0.6 5,082,866 + AO353_23160 0.73 +1.6 5,082,925 + AO353_23160 0.79 +0.6 5,083,113 + -1.2
Or see this region's nucleotide sequence