Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23080 and AO353_23085 are separated by 112 nucleotides AO353_23085 and AO353_23090 are separated by 236 nucleotides
AO353_23080: AO353_23080 - GntR family transcriptional regulator, at 5,065,814 to 5,067,148
_23080
AO353_23085: AO353_23085 - AraC family transcriptional regulator, at 5,067,261 to 5,067,875
_23085
AO353_23090: AO353_23090 - LysR family transcriptional regulator, at 5,068,112 to 5,069,005
_23090
Position (kb)
5067
5068 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5066.295 kb on + strand, within AO353_23080 at 5066.296 kb on - strand, within AO353_23080 at 5066.359 kb on - strand, within AO353_23080 at 5066.472 kb on + strand, within AO353_23080 at 5066.472 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.855 kb on + strand, within AO353_23080 at 5066.855 kb on + strand, within AO353_23080 at 5066.865 kb on + strand, within AO353_23080 at 5066.865 kb on + strand, within AO353_23080 at 5066.866 kb on - strand, within AO353_23080 at 5066.876 kb on - strand, within AO353_23080 at 5066.918 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5067.003 kb on + strand at 5067.119 kb on + strand at 5067.119 kb on + strand at 5067.119 kb on + strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.130 kb on + strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.133 kb on - strand at 5067.157 kb on - strand at 5067.164 kb on - strand at 5067.164 kb on - strand at 5067.169 kb on - strand at 5067.182 kb on + strand at 5067.186 kb on + strand at 5067.195 kb on + strand at 5067.208 kb on + strand at 5067.208 kb on + strand at 5067.208 kb on + strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.291 kb on + strand at 5067.291 kb on + strand at 5067.291 kb on + strand at 5067.292 kb on - strand at 5067.292 kb on - strand at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.506 kb on + strand, within AO353_23085 at 5067.507 kb on - strand, within AO353_23085 at 5067.601 kb on + strand, within AO353_23085 at 5067.786 kb on + strand, within AO353_23085 at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.817 kb on - strand at 5067.817 kb on - strand at 5067.817 kb on - strand at 5067.849 kb on + strand at 5067.849 kb on + strand at 5067.849 kb on + strand at 5067.850 kb on - strand at 5067.904 kb on + strand at 5067.904 kb on + strand at 5067.904 kb on + strand at 5067.905 kb on - strand at 5067.918 kb on + strand at 5067.918 kb on + strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5068.008 kb on + strand at 5068.009 kb on - strand at 5068.009 kb on - strand at 5068.009 kb on - strand at 5068.075 kb on + strand at 5068.094 kb on + strand at 5068.094 kb on + strand at 5068.094 kb on + strand at 5068.095 kb on - strand at 5068.106 kb on + strand at 5068.107 kb on - strand at 5068.107 kb on - strand at 5068.153 kb on + strand at 5068.194 kb on + strand at 5068.194 kb on + strand at 5068.371 kb on - strand, within AO353_23090 at 5068.371 kb on - strand, within AO353_23090 at 5068.371 kb on - strand, within AO353_23090 at 5068.426 kb on - strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.494 kb on + strand, within AO353_23090 at 5068.495 kb on - strand, within AO353_23090 at 5068.495 kb on - strand, within AO353_23090 at 5068.737 kb on - strand, within AO353_23090 at 5068.809 kb on + strand, within AO353_23090 at 5068.809 kb on + strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,066,295 + AO353_23080 0.36 +0.8 5,066,296 - AO353_23080 0.36 +1.0 5,066,359 - AO353_23080 0.41 +0.2 5,066,472 + AO353_23080 0.49 -2.0 5,066,472 + AO353_23080 0.49 +0.4 5,066,690 + AO353_23080 0.66 -0.4 5,066,690 + AO353_23080 0.66 +0.6 5,066,690 + AO353_23080 0.66 -1.3 5,066,690 + AO353_23080 0.66 +0.8 5,066,691 - AO353_23080 0.66 +0.6 5,066,691 - AO353_23080 0.66 -1.0 5,066,691 - AO353_23080 0.66 +0.2 5,066,691 - AO353_23080 0.66 -0.2 5,066,855 + AO353_23080 0.78 -1.7 5,066,855 + AO353_23080 0.78 +0.8 5,066,865 + AO353_23080 0.79 -2.4 5,066,865 + AO353_23080 0.79 +1.2 5,066,866 - AO353_23080 0.79 +1.6 5,066,876 - AO353_23080 0.80 +2.2 5,066,918 + AO353_23080 0.83 -1.0 5,066,953 + AO353_23080 0.85 -1.0 5,066,953 + AO353_23080 0.85 -0.4 5,066,953 + AO353_23080 0.85 -0.4 5,066,953 + AO353_23080 0.85 -0.4 5,066,953 + AO353_23080 0.85 +1.2 5,066,953 + AO353_23080 0.85 +1.2 5,066,953 + AO353_23080 0.85 -0.4 5,066,954 - AO353_23080 0.85 +0.9 5,066,954 - AO353_23080 0.85 -0.0 5,066,954 - AO353_23080 0.85 +0.6 5,066,954 - AO353_23080 0.85 +1.9 5,066,954 - AO353_23080 0.85 +0.3 5,066,954 - AO353_23080 0.85 -1.4 5,066,954 - AO353_23080 0.85 +0.3 5,066,954 - AO353_23080 0.85 +1.2 5,066,954 - AO353_23080 0.85 -0.7 5,066,954 - AO353_23080 0.85 -0.4 5,066,954 - AO353_23080 0.85 +0.9 5,066,954 - AO353_23080 0.85 -0.8 5,066,954 - AO353_23080 0.85 -2.4 5,066,954 - AO353_23080 0.85 +0.9 5,067,003 + -1.4 5,067,119 + +1.0 5,067,119 + +0.6 5,067,119 + +1.9 5,067,120 - -0.0 5,067,120 - +0.3 5,067,120 - -0.4 5,067,120 - +0.3 5,067,130 + +1.2 5,067,131 - -1.2 5,067,131 - -0.0 5,067,131 - +0.2 5,067,131 - +1.0 5,067,133 - -0.4 5,067,157 - -0.0 5,067,164 - +0.6 5,067,164 - +0.4 5,067,169 - -1.4 5,067,182 + +2.4 5,067,186 + +0.6 5,067,195 + +0.6 5,067,208 + +0.6 5,067,208 + +1.6 5,067,208 + +0.2 5,067,209 - +0.9 5,067,209 - +2.2 5,067,209 - +1.6 5,067,209 - +1.4 5,067,291 + -0.7 5,067,291 + +0.2 5,067,291 + -0.7 5,067,292 - -2.0 5,067,292 - -0.8 5,067,329 + AO353_23085 0.11 -0.5 5,067,329 + -1.4 5,067,329 + AO353_23085 0.11 -0.4 5,067,329 + AO353_23085 0.11 -1.0 5,067,329 + AO353_23085 0.11 +0.6 5,067,330 - AO353_23085 0.11 -0.4 5,067,330 - AO353_23085 0.11 +0.2 5,067,330 - AO353_23085 0.11 -2.0 5,067,330 - AO353_23085 0.11 -0.8 5,067,506 + AO353_23085 0.40 -0.4 5,067,507 - AO353_23085 0.40 -1.4 5,067,601 + AO353_23085 0.55 +0.6 5,067,786 + AO353_23085 0.85 -0.4 5,067,816 + +3.0 5,067,816 + -1.4 5,067,816 + +0.9 5,067,816 + -0.4 5,067,816 + +1.7 5,067,816 + -1.4 5,067,816 + +0.6 5,067,817 - -1.4 5,067,817 - -0.9 5,067,817 - -0.4 5,067,849 + -1.8 5,067,849 + -0.4 5,067,849 + +1.6 5,067,850 - +0.4 5,067,904 + -0.4 5,067,904 + +1.6 5,067,904 + -0.0 5,067,905 - +2.2 5,067,918 + +0.6 5,067,918 + +0.6 5,067,919 - -0.4 5,067,919 - +2.6 5,067,919 - -0.4 5,067,919 - +1.4 5,067,949 - +0.4 5,067,949 - -1.4 5,067,949 - -1.4 5,067,949 - -1.4 5,068,008 + -2.0 5,068,009 - -2.0 5,068,009 - +0.4 5,068,009 - +1.0 5,068,075 + +0.3 5,068,094 + -1.2 5,068,094 + -1.4 5,068,094 + -0.4 5,068,095 - +1.0 5,068,106 + -1.4 5,068,107 - -0.4 5,068,107 - +0.6 5,068,153 + -1.2 5,068,194 + +0.8 5,068,194 + +1.2 5,068,371 - AO353_23090 0.29 -1.0 5,068,371 - AO353_23090 0.29 +0.6 5,068,371 - AO353_23090 0.29 -1.0 5,068,426 - AO353_23090 0.35 +1.2 5,068,431 + AO353_23090 0.36 -0.1 5,068,431 + AO353_23090 0.36 -0.4 5,068,431 + AO353_23090 0.36 -0.4 5,068,432 - AO353_23090 0.36 -1.0 5,068,432 - AO353_23090 0.36 -1.0 5,068,432 - AO353_23090 0.36 -0.4 5,068,494 + AO353_23090 0.43 -1.4 5,068,495 - AO353_23090 0.43 +0.4 5,068,495 - AO353_23090 0.43 +1.0 5,068,737 - AO353_23090 0.70 +0.6 5,068,809 + AO353_23090 0.78 -1.4 5,068,809 + AO353_23090 0.78 -0.1 5,068,810 - AO353_23090 0.78 -1.4 5,068,810 - AO353_23090 0.78 -2.0 5,068,810 - AO353_23090 0.78 +1.9 5,068,810 - AO353_23090 0.78 +1.0 5,068,810 - AO353_23090 0.78 -0.0
Or see this region's nucleotide sequence