Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21280 and AO353_21285 are separated by 13 nucleotides AO353_21285 and AO353_21290 are separated by 368 nucleotides AO353_21290 and AO353_21295 are separated by 847 nucleotides
AO353_21280: AO353_21280 - metallophosphoesterase, at 4,656,596 to 4,657,567
_21280
AO353_21285: AO353_21285 - amidase, at 4,657,581 to 4,657,901
_21285
AO353_21290: AO353_21290 - hypothetical protein, at 4,658,270 to 4,658,539
_21290
AO353_21295: AO353_21295 - hypothetical protein, at 4,659,387 to 4,660,784
_21295
Position (kb)
4658
4659 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4657.328 kb on + strand, within AO353_21280 at 4657.328 kb on + strand, within AO353_21280 at 4657.329 kb on - strand, within AO353_21280 at 4657.329 kb on - strand, within AO353_21280 at 4657.357 kb on + strand, within AO353_21280 at 4657.422 kb on - strand, within AO353_21280 at 4657.493 kb on + strand at 4657.493 kb on + strand at 4657.493 kb on + strand at 4657.493 kb on + strand at 4657.494 kb on - strand at 4657.494 kb on - strand at 4657.494 kb on - strand at 4657.494 kb on - strand at 4657.592 kb on - strand at 4657.748 kb on + strand, within AO353_21285 at 4657.755 kb on - strand, within AO353_21285 at 4657.793 kb on + strand, within AO353_21285 at 4657.793 kb on + strand, within AO353_21285 at 4657.812 kb on + strand, within AO353_21285 at 4657.823 kb on + strand, within AO353_21285 at 4657.842 kb on + strand, within AO353_21285 at 4657.842 kb on + strand, within AO353_21285 at 4657.842 kb on + strand, within AO353_21285 at 4657.842 kb on + strand, within AO353_21285 at 4657.843 kb on - strand, within AO353_21285 at 4657.843 kb on - strand, within AO353_21285 at 4657.843 kb on - strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.845 kb on + strand, within AO353_21285 at 4657.846 kb on - strand, within AO353_21285 at 4657.846 kb on - strand, within AO353_21285 at 4657.846 kb on - strand, within AO353_21285 at 4657.916 kb on + strand at 4657.917 kb on - strand at 4657.917 kb on - strand at 4657.994 kb on + strand at 4657.995 kb on - strand at 4657.995 kb on - strand at 4657.995 kb on - strand at 4657.995 kb on - strand at 4657.995 kb on - strand at 4657.995 kb on - strand at 4657.999 kb on + strand at 4658.000 kb on - strand at 4658.000 kb on - strand at 4658.000 kb on - strand at 4658.000 kb on - strand at 4658.000 kb on - strand at 4658.000 kb on - strand at 4658.124 kb on + strand at 4658.202 kb on + strand at 4658.202 kb on + strand at 4658.203 kb on - strand at 4658.203 kb on - strand at 4658.207 kb on + strand at 4658.207 kb on + strand at 4658.207 kb on + strand at 4658.207 kb on + strand at 4658.207 kb on + strand at 4658.208 kb on - strand at 4658.231 kb on + strand at 4658.231 kb on + strand at 4658.231 kb on + strand at 4658.231 kb on + strand at 4658.232 kb on - strand at 4658.232 kb on - strand at 4658.232 kb on - strand at 4658.232 kb on - strand at 4658.497 kb on + strand, within AO353_21290 at 4658.497 kb on + strand, within AO353_21290 at 4658.497 kb on + strand, within AO353_21290 at 4658.497 kb on + strand, within AO353_21290 at 4658.498 kb on - strand, within AO353_21290 at 4658.498 kb on - strand, within AO353_21290 at 4658.498 kb on - strand, within AO353_21290 at 4658.498 kb on - strand, within AO353_21290 at 4658.498 kb on - strand, within AO353_21290 at 4658.604 kb on + strand at 4658.755 kb on - strand at 4658.766 kb on + strand at 4658.767 kb on - strand at 4658.767 kb on - strand at 4658.839 kb on + strand at 4658.840 kb on - strand at 4658.851 kb on + strand at 4658.851 kb on + strand at 4658.851 kb on + strand at 4658.886 kb on - strand at 4658.887 kb on + strand at 4658.888 kb on - strand at 4658.888 kb on - strand at 4658.896 kb on + strand at 4658.896 kb on + strand at 4658.896 kb on + strand at 4658.896 kb on + strand at 4658.897 kb on - strand at 4658.897 kb on - strand at 4658.914 kb on + strand at 4658.914 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.922 kb on + strand at 4658.923 kb on - strand at 4658.923 kb on - strand at 4658.923 kb on - strand at 4658.923 kb on - strand at 4658.923 kb on - strand at 4658.923 kb on - strand at 4658.992 kb on - strand at 4658.992 kb on - strand at 4659.035 kb on + strand at 4659.035 kb on + strand at 4659.071 kb on - strand at 4659.123 kb on + strand at 4659.124 kb on - strand at 4659.124 kb on - strand at 4659.140 kb on + strand at 4659.140 kb on + strand at 4659.140 kb on + strand at 4659.140 kb on + strand at 4659.141 kb on - strand at 4659.141 kb on - strand at 4659.141 kb on - strand at 4659.141 kb on - strand at 4659.141 kb on - strand at 4659.145 kb on + strand at 4659.145 kb on + strand at 4659.145 kb on + strand at 4659.145 kb on + strand at 4659.145 kb on + strand at 4659.146 kb on - strand at 4659.146 kb on - strand at 4659.146 kb on - strand at 4659.146 kb on - strand at 4659.148 kb on + strand at 4659.148 kb on + strand at 4659.193 kb on + strand at 4659.194 kb on - strand at 4659.194 kb on - strand at 4659.204 kb on + strand at 4659.204 kb on + strand at 4659.205 kb on - strand at 4659.205 kb on - strand at 4659.263 kb on + strand at 4659.263 kb on + strand at 4659.263 kb on + strand at 4659.264 kb on - strand at 4659.264 kb on - strand at 4659.264 kb on - strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.265 kb on + strand at 4659.266 kb on - strand at 4659.266 kb on - strand at 4659.266 kb on - strand at 4659.266 kb on - strand at 4659.266 kb on - strand at 4659.297 kb on + strand at 4659.297 kb on + strand at 4659.297 kb on + strand at 4659.298 kb on - strand at 4659.298 kb on - strand at 4659.318 kb on + strand at 4659.318 kb on + strand at 4659.318 kb on + strand at 4659.319 kb on - strand at 4659.319 kb on - strand at 4659.407 kb on + strand at 4659.407 kb on + strand at 4659.408 kb on - strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.454 kb on + strand at 4659.455 kb on - strand at 4659.455 kb on - strand at 4659.455 kb on - strand at 4659.455 kb on - strand at 4659.473 kb on + strand at 4659.474 kb on - strand at 4659.474 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,657,328 + AO353_21280 0.75 +0.1 4,657,328 + AO353_21280 0.75 -0.3 4,657,329 - AO353_21280 0.75 -0.3 4,657,329 - AO353_21280 0.75 -0.7 4,657,357 + AO353_21280 0.78 +0.3 4,657,422 - AO353_21280 0.85 +1.9 4,657,493 + +1.3 4,657,493 + -0.3 4,657,493 + +0.7 4,657,493 + +1.3 4,657,494 - -0.3 4,657,494 - +0.3 4,657,494 - -1.3 4,657,494 - -0.6 4,657,592 - +0.0 4,657,748 + AO353_21285 0.52 -0.9 4,657,755 - AO353_21285 0.54 +1.5 4,657,793 + AO353_21285 0.66 +1.1 4,657,793 + AO353_21285 0.66 -0.1 4,657,812 + AO353_21285 0.72 -0.3 4,657,823 + AO353_21285 0.75 +0.7 4,657,842 + AO353_21285 0.81 +0.7 4,657,842 + AO353_21285 0.81 -2.3 4,657,842 + AO353_21285 0.81 +0.9 4,657,842 + AO353_21285 0.81 +1.3 4,657,843 - AO353_21285 0.82 +1.7 4,657,843 - AO353_21285 0.82 -1.0 4,657,843 - AO353_21285 0.82 +0.3 4,657,845 + AO353_21285 0.82 +0.4 4,657,845 + AO353_21285 0.82 +0.9 4,657,845 + AO353_21285 0.82 -0.9 4,657,845 + AO353_21285 0.82 +1.5 4,657,845 + AO353_21285 0.82 +1.1 4,657,845 + AO353_21285 0.82 -1.6 4,657,845 + AO353_21285 0.82 -0.3 4,657,846 - AO353_21285 0.83 -0.0 4,657,846 - AO353_21285 0.83 +1.3 4,657,846 - AO353_21285 0.83 +2.3 4,657,916 + +1.1 4,657,917 - +1.3 4,657,917 - +2.0 4,657,994 + +0.4 4,657,995 - +0.1 4,657,995 - -0.3 4,657,995 - +1.7 4,657,995 - -1.7 4,657,995 - -1.6 4,657,995 - +0.7 4,657,999 + -0.9 4,658,000 - +1.0 4,658,000 - +1.0 4,658,000 - +0.7 4,658,000 - -0.8 4,658,000 - -0.3 4,658,000 - -1.3 4,658,124 + +0.7 4,658,202 + -0.9 4,658,202 + +0.2 4,658,203 - +0.0 4,658,203 - +0.7 4,658,207 + -1.9 4,658,207 + +1.7 4,658,207 + +0.1 4,658,207 + -0.3 4,658,207 + +0.1 4,658,208 - +2.3 4,658,231 + +0.5 4,658,231 + +0.3 4,658,231 + -0.5 4,658,231 + +0.7 4,658,232 - -1.3 4,658,232 - +0.3 4,658,232 - -0.9 4,658,232 - -0.3 4,658,497 + AO353_21290 0.84 -1.5 4,658,497 + AO353_21290 0.84 -1.3 4,658,497 + AO353_21290 0.84 +0.4 4,658,497 + AO353_21290 0.84 -0.3 4,658,498 - AO353_21290 0.84 -0.9 4,658,498 - AO353_21290 0.84 -0.3 4,658,498 - AO353_21290 0.84 -0.6 4,658,498 - AO353_21290 0.84 -0.3 4,658,498 - AO353_21290 0.84 +0.7 4,658,604 + +1.6 4,658,755 - +0.6 4,658,766 + -0.3 4,658,767 - +0.3 4,658,767 - +0.3 4,658,839 + -0.9 4,658,840 - +0.9 4,658,851 + +0.0 4,658,851 + +2.0 4,658,851 + -0.3 4,658,886 - +0.0 4,658,887 + +1.0 4,658,888 - -0.2 4,658,888 - +0.7 4,658,896 + +0.1 4,658,896 + -0.3 4,658,896 + -0.2 4,658,896 + +1.6 4,658,897 - -1.0 4,658,897 - +0.4 4,658,914 + +1.1 4,658,914 + +0.7 4,658,922 + +0.5 4,658,922 + +0.7 4,658,922 + -0.8 4,658,922 + +1.7 4,658,922 + -0.3 4,658,922 + -0.3 4,658,922 + -0.6 4,658,922 + -1.3 4,658,923 - -0.6 4,658,923 - -1.6 4,658,923 - -1.3 4,658,923 - +1.1 4,658,923 - -0.3 4,658,923 - +0.0 4,658,992 - +0.9 4,658,992 - +1.3 4,659,035 + -0.1 4,659,035 + +2.0 4,659,071 - -0.5 4,659,123 + -0.3 4,659,124 - +0.3 4,659,124 - +0.3 4,659,140 + +0.9 4,659,140 + -0.3 4,659,140 + +0.5 4,659,140 + -1.9 4,659,141 - +2.5 4,659,141 - +0.0 4,659,141 - -1.0 4,659,141 - -0.3 4,659,141 - -0.7 4,659,145 + -1.3 4,659,145 + +0.4 4,659,145 + -1.0 4,659,145 + -0.3 4,659,145 + -1.9 4,659,146 - -1.9 4,659,146 - +1.9 4,659,146 - +1.7 4,659,146 - +0.5 4,659,148 + +0.4 4,659,148 + +0.7 4,659,193 + +0.3 4,659,194 - -1.9 4,659,194 - +0.4 4,659,204 + -1.3 4,659,204 + -1.6 4,659,205 - +1.3 4,659,205 - -1.3 4,659,263 + -1.3 4,659,263 + +1.3 4,659,263 + -1.3 4,659,264 - -1.3 4,659,264 - -0.6 4,659,264 - +0.7 4,659,265 + -0.4 4,659,265 + -0.3 4,659,265 + -0.3 4,659,265 + +0.3 4,659,265 + +1.3 4,659,265 + -2.3 4,659,265 + +2.8 4,659,265 + +0.1 4,659,265 + -0.3 4,659,265 + +0.5 4,659,265 + -1.1 4,659,265 + +1.0 4,659,265 + -1.9 4,659,266 - -2.3 4,659,266 - +0.2 4,659,266 - +0.7 4,659,266 - -1.3 4,659,266 - -0.3 4,659,297 + +0.7 4,659,297 + -0.3 4,659,297 + +1.7 4,659,298 - -0.3 4,659,298 - +1.8 4,659,318 + -1.1 4,659,318 + +0.7 4,659,318 + +1.7 4,659,319 - +0.7 4,659,319 - +0.7 4,659,407 + +0.9 4,659,407 + +1.1 4,659,408 - +1.7 4,659,454 + +1.2 4,659,454 + +0.4 4,659,454 + +1.0 4,659,454 + +1.7 4,659,454 + -1.3 4,659,454 + -0.3 4,659,454 + +0.7 4,659,455 - +0.6 4,659,455 - -0.3 4,659,455 - +1.7 4,659,455 - +1.7 4,659,473 + -2.1 4,659,474 - +2.5 4,659,474 - -1.3
Or see this region's nucleotide sequence