Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21050 and AO353_21055 are separated by 71 nucleotides AO353_21055 and AO353_21060 are separated by 31 nucleotides
AO353_21050: AO353_21050 - hypothetical protein, at 4,600,843 to 4,602,201
_21050
AO353_21055: AO353_21055 - glycosyl hydrolase, at 4,602,273 to 4,603,346
_21055
AO353_21060: AO353_21060 - RND transporter, at 4,603,378 to 4,605,912
_21060
Position (kb)
4602
4603
4604 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4601.389 kb on + strand, within AO353_21050 at 4601.389 kb on + strand, within AO353_21050 at 4601.390 kb on - strand, within AO353_21050 at 4601.451 kb on + strand, within AO353_21050 at 4601.452 kb on - strand, within AO353_21050 at 4601.452 kb on - strand, within AO353_21050 at 4601.452 kb on - strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.506 kb on + strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.507 kb on - strand, within AO353_21050 at 4601.509 kb on + strand, within AO353_21050 at 4601.509 kb on + strand, within AO353_21050 at 4601.528 kb on - strand, within AO353_21050 at 4601.615 kb on - strand, within AO353_21050 at 4601.615 kb on - strand, within AO353_21050 at 4601.659 kb on + strand, within AO353_21050 at 4601.659 kb on + strand, within AO353_21050 at 4601.659 kb on + strand, within AO353_21050 at 4601.659 kb on + strand, within AO353_21050 at 4601.660 kb on - strand, within AO353_21050 at 4601.660 kb on - strand, within AO353_21050 at 4601.698 kb on + strand, within AO353_21050 at 4601.779 kb on + strand, within AO353_21050 at 4601.779 kb on + strand, within AO353_21050 at 4601.788 kb on + strand, within AO353_21050 at 4601.788 kb on + strand, within AO353_21050 at 4601.788 kb on + strand, within AO353_21050 at 4601.789 kb on - strand, within AO353_21050 at 4601.789 kb on - strand, within AO353_21050 at 4601.789 kb on - strand, within AO353_21050 at 4601.789 kb on - strand, within AO353_21050 at 4601.800 kb on + strand, within AO353_21050 at 4601.819 kb on + strand, within AO353_21050 at 4601.820 kb on - strand, within AO353_21050 at 4601.851 kb on + strand, within AO353_21050 at 4601.852 kb on - strand, within AO353_21050 at 4601.852 kb on - strand, within AO353_21050 at 4601.920 kb on + strand, within AO353_21050 at 4601.920 kb on + strand, within AO353_21050 at 4601.921 kb on - strand, within AO353_21050 at 4601.921 kb on - strand, within AO353_21050 at 4601.939 kb on - strand, within AO353_21050 at 4601.939 kb on - strand at 4601.939 kb on - strand, within AO353_21050 at 4601.939 kb on - strand, within AO353_21050 at 4601.980 kb on + strand, within AO353_21050 at 4602.002 kb on - strand at 4602.034 kb on + strand, within AO353_21050 at 4602.034 kb on + strand, within AO353_21050 at 4602.034 kb on + strand, within AO353_21050 at 4602.035 kb on - strand, within AO353_21050 at 4602.035 kb on - strand, within AO353_21050 at 4602.074 kb on - strand at 4602.074 kb on - strand at 4602.074 kb on - strand at 4602.095 kb on - strand at 4602.095 kb on - strand at 4602.095 kb on - strand at 4602.095 kb on - strand at 4602.121 kb on + strand at 4602.136 kb on + strand at 4602.137 kb on - strand at 4602.137 kb on - strand at 4602.137 kb on - strand at 4602.137 kb on - strand at 4602.137 kb on - strand at 4602.137 kb on - strand at 4602.272 kb on + strand at 4602.273 kb on - strand at 4602.273 kb on - strand at 4602.355 kb on - strand at 4602.474 kb on + strand, within AO353_21055 at 4602.474 kb on + strand, within AO353_21055 at 4602.474 kb on + strand, within AO353_21055 at 4602.475 kb on - strand, within AO353_21055 at 4602.804 kb on + strand, within AO353_21055 at 4602.805 kb on - strand, within AO353_21055 at 4602.805 kb on - strand, within AO353_21055 at 4602.878 kb on + strand, within AO353_21055 at 4602.936 kb on + strand, within AO353_21055 at 4602.936 kb on + strand, within AO353_21055 at 4602.937 kb on - strand, within AO353_21055 at 4602.937 kb on - strand, within AO353_21055 at 4602.937 kb on - strand, within AO353_21055 at 4603.012 kb on - strand, within AO353_21055 at 4603.177 kb on - strand, within AO353_21055 at 4603.344 kb on + strand at 4603.345 kb on - strand at 4603.525 kb on + strand at 4603.525 kb on + strand at 4603.525 kb on + strand at 4603.526 kb on - strand at 4603.526 kb on - strand at 4603.526 kb on - strand at 4603.526 kb on - strand at 4603.526 kb on - strand at 4603.526 kb on - strand at 4603.591 kb on + strand at 4603.591 kb on + strand at 4603.591 kb on + strand at 4603.591 kb on + strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.592 kb on - strand at 4603.593 kb on + strand at 4603.677 kb on + strand, within AO353_21060 at 4603.678 kb on - strand, within AO353_21060 at 4603.843 kb on + strand, within AO353_21060 at 4603.843 kb on + strand, within AO353_21060 at 4603.844 kb on - strand, within AO353_21060 at 4603.865 kb on + strand, within AO353_21060 at 4603.866 kb on - strand, within AO353_21060 at 4603.866 kb on - strand, within AO353_21060 at 4603.866 kb on - strand, within AO353_21060 at 4603.866 kb on - strand, within AO353_21060 at 4603.866 kb on - strand, within AO353_21060 at 4603.994 kb on - strand, within AO353_21060 at 4603.994 kb on - strand, within AO353_21060 at 4603.994 kb on - strand, within AO353_21060 at 4604.095 kb on + strand, within AO353_21060 at 4604.095 kb on + strand, within AO353_21060 at 4604.095 kb on + strand, within AO353_21060 at 4604.095 kb on + strand, within AO353_21060 at 4604.096 kb on - strand, within AO353_21060 at 4604.096 kb on - strand, within AO353_21060 at 4604.096 kb on - strand, within AO353_21060 at 4604.202 kb on + strand, within AO353_21060 at 4604.213 kb on - strand, within AO353_21060
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,601,389 + AO353_21050 0.40 -0.0 4,601,389 + AO353_21050 0.40 +0.3 4,601,390 - AO353_21050 0.40 -0.6 4,601,451 + AO353_21050 0.45 +0.7 4,601,452 - AO353_21050 0.45 -1.9 4,601,452 - AO353_21050 0.45 +0.7 4,601,452 - AO353_21050 0.45 +0.9 4,601,506 + AO353_21050 0.49 -1.3 4,601,506 + AO353_21050 0.49 +0.2 4,601,506 + AO353_21050 0.49 -0.3 4,601,506 + AO353_21050 0.49 +0.7 4,601,506 + AO353_21050 0.49 -2.6 4,601,506 + AO353_21050 0.49 +0.3 4,601,507 - AO353_21050 0.49 +0.0 4,601,507 - AO353_21050 0.49 -0.0 4,601,507 - AO353_21050 0.49 +0.4 4,601,507 - AO353_21050 0.49 -1.3 4,601,507 - AO353_21050 0.49 +0.7 4,601,507 - AO353_21050 0.49 +0.6 4,601,509 + AO353_21050 0.49 -1.5 4,601,509 + AO353_21050 0.49 +0.2 4,601,528 - AO353_21050 0.50 +2.3 4,601,615 - AO353_21050 0.57 -2.3 4,601,615 - AO353_21050 0.57 +2.5 4,601,659 + AO353_21050 0.60 +1.7 4,601,659 + AO353_21050 0.60 -3.1 4,601,659 + AO353_21050 0.60 +0.2 4,601,659 + AO353_21050 0.60 +0.7 4,601,660 - AO353_21050 0.60 -0.3 4,601,660 - AO353_21050 0.60 +1.7 4,601,698 + AO353_21050 0.63 +1.3 4,601,779 + AO353_21050 0.69 +0.7 4,601,779 + AO353_21050 0.69 -0.3 4,601,788 + AO353_21050 0.70 +0.1 4,601,788 + AO353_21050 0.70 -1.1 4,601,788 + AO353_21050 0.70 +1.3 4,601,789 - AO353_21050 0.70 -0.7 4,601,789 - AO353_21050 0.70 +0.7 4,601,789 - AO353_21050 0.70 +0.7 4,601,789 - AO353_21050 0.70 -1.0 4,601,800 + AO353_21050 0.70 -1.9 4,601,819 + AO353_21050 0.72 -0.3 4,601,820 - AO353_21050 0.72 -1.9 4,601,851 + AO353_21050 0.74 -0.3 4,601,852 - AO353_21050 0.74 +0.5 4,601,852 - AO353_21050 0.74 -1.3 4,601,920 + AO353_21050 0.79 -1.3 4,601,920 + AO353_21050 0.79 -0.3 4,601,921 - AO353_21050 0.79 +0.2 4,601,921 - AO353_21050 0.79 -0.3 4,601,939 - AO353_21050 0.81 +2.0 4,601,939 - -1.9 4,601,939 - AO353_21050 0.81 +2.2 4,601,939 - AO353_21050 0.81 +1.0 4,601,980 + AO353_21050 0.84 +0.3 4,602,002 - +0.3 4,602,034 + AO353_21050 0.88 -0.3 4,602,034 + AO353_21050 0.88 +0.0 4,602,034 + AO353_21050 0.88 -0.0 4,602,035 - AO353_21050 0.88 +0.7 4,602,035 - AO353_21050 0.88 +1.3 4,602,074 - +0.7 4,602,074 - -2.3 4,602,074 - -0.9 4,602,095 - +0.0 4,602,095 - +0.3 4,602,095 - -0.7 4,602,095 - +1.3 4,602,121 + -0.3 4,602,136 + -0.6 4,602,137 - +0.0 4,602,137 - +0.7 4,602,137 - +0.5 4,602,137 - +1.9 4,602,137 - -3.1 4,602,137 - -0.3 4,602,272 + -1.4 4,602,273 - -1.3 4,602,273 - -0.5 4,602,355 - +0.3 4,602,474 + AO353_21055 0.19 -1.3 4,602,474 + AO353_21055 0.19 +2.3 4,602,474 + AO353_21055 0.19 -1.9 4,602,475 - AO353_21055 0.19 -1.9 4,602,804 + AO353_21055 0.49 +0.5 4,602,805 - AO353_21055 0.50 +0.7 4,602,805 - AO353_21055 0.50 +0.6 4,602,878 + AO353_21055 0.56 -0.5 4,602,936 + AO353_21055 0.62 -0.9 4,602,936 + AO353_21055 0.62 -0.9 4,602,937 - AO353_21055 0.62 -0.7 4,602,937 - AO353_21055 0.62 -0.1 4,602,937 - AO353_21055 0.62 -0.5 4,603,012 - AO353_21055 0.69 -0.3 4,603,177 - AO353_21055 0.84 -1.3 4,603,344 + -1.6 4,603,345 - +0.3 4,603,525 + +2.0 4,603,525 + +1.3 4,603,525 + +0.3 4,603,526 - -1.0 4,603,526 - +0.0 4,603,526 - +1.7 4,603,526 - +0.5 4,603,526 - -1.3 4,603,526 - -1.3 4,603,591 + +0.2 4,603,591 + +0.0 4,603,591 + -0.3 4,603,591 + -2.3 4,603,592 - +1.4 4,603,592 - +0.7 4,603,592 - -0.3 4,603,592 - -1.9 4,603,592 - -0.9 4,603,592 - +0.2 4,603,592 - +2.3 4,603,592 - +0.7 4,603,592 - +0.3 4,603,592 - +2.0 4,603,593 + +1.4 4,603,677 + AO353_21060 0.12 +0.4 4,603,678 - AO353_21060 0.12 +0.9 4,603,843 + AO353_21060 0.18 -0.3 4,603,843 + AO353_21060 0.18 -0.3 4,603,844 - AO353_21060 0.18 +0.3 4,603,865 + AO353_21060 0.19 +2.0 4,603,866 - AO353_21060 0.19 -0.7 4,603,866 - AO353_21060 0.19 -0.9 4,603,866 - AO353_21060 0.19 +1.4 4,603,866 - AO353_21060 0.19 +0.5 4,603,866 - AO353_21060 0.19 +0.3 4,603,994 - AO353_21060 0.24 +1.6 4,603,994 - AO353_21060 0.24 +1.0 4,603,994 - AO353_21060 0.24 +0.4 4,604,095 + AO353_21060 0.28 -0.9 4,604,095 + AO353_21060 0.28 +1.4 4,604,095 + AO353_21060 0.28 -1.9 4,604,095 + AO353_21060 0.28 -0.3 4,604,096 - AO353_21060 0.28 +1.3 4,604,096 - AO353_21060 0.28 -0.3 4,604,096 - AO353_21060 0.28 +1.1 4,604,202 + AO353_21060 0.33 -1.3 4,604,213 - AO353_21060 0.33 -0.8
Or see this region's nucleotide sequence