Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17055 and AO353_17060 are separated by 283 nucleotides AO353_17060 and AO353_17065 are separated by 115 nucleotides
AO353_17055: AO353_17055 - sodium:proton antiporter, at 3,769,963 to 3,771,150
_17055
AO353_17060: AO353_17060 - cysteine synthase, at 3,771,434 to 3,772,528
_17060
AO353_17065: AO353_17065 - hypothetical protein, at 3,772,644 to 3,774,257
_17065
Position (kb)
3771
3772
3773 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.166 kb on - strand at 3771.280 kb on - strand at 3771.311 kb on + strand at 3771.311 kb on + strand at 3771.312 kb on - strand at 3771.322 kb on + strand at 3771.323 kb on - strand at 3771.323 kb on - strand at 3771.323 kb on - strand at 3771.338 kb on + strand at 3771.339 kb on - strand at 3771.403 kb on + strand at 3771.409 kb on + strand at 3771.409 kb on + strand at 3771.505 kb on + strand at 3771.554 kb on + strand, within AO353_17060 at 3771.554 kb on + strand, within AO353_17060 at 3771.554 kb on + strand, within AO353_17060 at 3771.554 kb on + strand, within AO353_17060 at 3771.554 kb on + strand, within AO353_17060 at 3771.554 kb on + strand, within AO353_17060 at 3771.555 kb on - strand, within AO353_17060 at 3771.623 kb on + strand, within AO353_17060 at 3771.634 kb on + strand, within AO353_17060 at 3771.635 kb on - strand, within AO353_17060 at 3771.635 kb on - strand, within AO353_17060 at 3771.635 kb on - strand, within AO353_17060 at 3771.704 kb on + strand, within AO353_17060 at 3771.705 kb on - strand, within AO353_17060 at 3771.705 kb on - strand, within AO353_17060 at 3771.705 kb on - strand, within AO353_17060 at 3771.705 kb on - strand, within AO353_17060 at 3771.788 kb on + strand, within AO353_17060 at 3771.788 kb on + strand, within AO353_17060 at 3771.788 kb on + strand, within AO353_17060 at 3771.789 kb on - strand, within AO353_17060 at 3771.789 kb on - strand, within AO353_17060 at 3771.789 kb on - strand, within AO353_17060 at 3771.789 kb on - strand, within AO353_17060 at 3771.830 kb on + strand, within AO353_17060 at 3771.831 kb on - strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.890 kb on + strand, within AO353_17060 at 3771.891 kb on - strand, within AO353_17060 at 3771.891 kb on - strand, within AO353_17060 at 3771.891 kb on - strand, within AO353_17060 at 3772.103 kb on + strand, within AO353_17060 at 3772.103 kb on + strand, within AO353_17060 at 3772.104 kb on - strand, within AO353_17060 at 3772.104 kb on - strand, within AO353_17060 at 3772.106 kb on + strand, within AO353_17060 at 3772.107 kb on - strand, within AO353_17060 at 3772.107 kb on - strand, within AO353_17060 at 3772.107 kb on - strand, within AO353_17060 at 3772.253 kb on + strand, within AO353_17060 at 3772.253 kb on + strand, within AO353_17060 at 3772.253 kb on + strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.254 kb on - strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.406 kb on + strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand, within AO353_17060 at 3772.407 kb on - strand at 3772.409 kb on + strand, within AO353_17060 at 3772.409 kb on + strand, within AO353_17060 at 3772.409 kb on + strand, within AO353_17060 at 3772.410 kb on - strand, within AO353_17060 at 3772.410 kb on - strand, within AO353_17060 at 3772.439 kb on + strand at 3772.526 kb on + strand at 3772.526 kb on + strand at 3772.526 kb on + strand at 3772.527 kb on - strand at 3772.576 kb on + strand at 3772.577 kb on - strand at 3772.632 kb on - strand at 3772.632 kb on - strand at 3772.664 kb on + strand at 3772.665 kb on - strand at 3772.963 kb on + strand, within AO353_17065 at 3772.963 kb on + strand, within AO353_17065 at 3772.963 kb on + strand, within AO353_17065 at 3772.963 kb on + strand, within AO353_17065 at 3772.964 kb on - strand, within AO353_17065 at 3772.964 kb on - strand, within AO353_17065 at 3772.964 kb on - strand, within AO353_17065 at 3772.964 kb on - strand, within AO353_17065 at 3772.964 kb on - strand, within AO353_17065 at 3773.041 kb on + strand, within AO353_17065 at 3773.041 kb on + strand, within AO353_17065 at 3773.041 kb on + strand, within AO353_17065 at 3773.042 kb on - strand, within AO353_17065 at 3773.042 kb on - strand, within AO353_17065 at 3773.042 kb on - strand, within AO353_17065 at 3773.042 kb on - strand, within AO353_17065 at 3773.042 kb on - strand, within AO353_17065 at 3773.165 kb on + strand, within AO353_17065 at 3773.182 kb on + strand, within AO353_17065 at 3773.267 kb on - strand, within AO353_17065 at 3773.305 kb on + strand, within AO353_17065 at 3773.305 kb on + strand, within AO353_17065 at 3773.306 kb on - strand, within AO353_17065 at 3773.306 kb on - strand, within AO353_17065 at 3773.338 kb on + strand, within AO353_17065 at 3773.338 kb on + strand, within AO353_17065 at 3773.339 kb on - strand, within AO353_17065 at 3773.339 kb on - strand, within AO353_17065 at 3773.339 kb on - strand, within AO353_17065 at 3773.339 kb on - strand, within AO353_17065 at 3773.339 kb on - strand, within AO353_17065
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,771,166 - +0.0 3,771,166 - +0.3 3,771,166 - +1.0 3,771,166 - +2.3 3,771,166 - +0.0 3,771,166 - +1.2 3,771,166 - -2.3 3,771,280 - +0.0 3,771,311 + -0.3 3,771,311 + -0.6 3,771,312 - +1.0 3,771,322 + +0.6 3,771,323 - +0.7 3,771,323 - +0.0 3,771,323 - -1.0 3,771,338 + -0.4 3,771,339 - +1.0 3,771,403 + +0.0 3,771,409 + -1.3 3,771,409 + +1.3 3,771,505 + +0.0 3,771,554 + AO353_17060 0.11 +0.4 3,771,554 + AO353_17060 0.11 -0.2 3,771,554 + AO353_17060 0.11 -0.3 3,771,554 + AO353_17060 0.11 +1.6 3,771,554 + AO353_17060 0.11 +0.2 3,771,554 + AO353_17060 0.11 +0.0 3,771,555 - AO353_17060 0.11 +0.3 3,771,623 + AO353_17060 0.17 -1.3 3,771,634 + AO353_17060 0.18 +2.0 3,771,635 - AO353_17060 0.18 +1.0 3,771,635 - AO353_17060 0.18 +0.0 3,771,635 - AO353_17060 0.18 +1.0 3,771,704 + AO353_17060 0.25 +1.0 3,771,705 - AO353_17060 0.25 -2.3 3,771,705 - AO353_17060 0.25 +0.0 3,771,705 - AO353_17060 0.25 -2.8 3,771,705 - AO353_17060 0.25 -1.6 3,771,788 + AO353_17060 0.32 -0.3 3,771,788 + AO353_17060 0.32 +1.6 3,771,788 + AO353_17060 0.32 +0.0 3,771,789 - AO353_17060 0.32 -2.3 3,771,789 - AO353_17060 0.32 +0.6 3,771,789 - AO353_17060 0.32 +1.0 3,771,789 - AO353_17060 0.32 -0.3 3,771,830 + AO353_17060 0.36 +0.0 3,771,831 - AO353_17060 0.36 +0.0 3,771,890 + AO353_17060 0.42 +1.6 3,771,890 + AO353_17060 0.42 +0.8 3,771,890 + AO353_17060 0.42 +0.5 3,771,890 + AO353_17060 0.42 +1.0 3,771,890 + AO353_17060 0.42 -0.4 3,771,890 + AO353_17060 0.42 +0.6 3,771,891 - AO353_17060 0.42 -1.6 3,771,891 - AO353_17060 0.42 -1.0 3,771,891 - AO353_17060 0.42 +0.5 3,772,103 + AO353_17060 0.61 +2.0 3,772,103 + AO353_17060 0.61 +0.1 3,772,104 - AO353_17060 0.61 +1.2 3,772,104 - AO353_17060 0.61 +0.8 3,772,106 + AO353_17060 0.61 +1.0 3,772,107 - AO353_17060 0.61 +1.6 3,772,107 - AO353_17060 0.61 +0.6 3,772,107 - AO353_17060 0.61 +0.0 3,772,253 + AO353_17060 0.75 -0.6 3,772,253 + AO353_17060 0.75 +1.0 3,772,253 + AO353_17060 0.75 +1.7 3,772,254 - AO353_17060 0.75 +0.0 3,772,254 - AO353_17060 0.75 +1.0 3,772,254 - AO353_17060 0.75 +0.0 3,772,254 - AO353_17060 0.75 -0.9 3,772,254 - AO353_17060 0.75 -1.6 3,772,254 - AO353_17060 0.75 -0.4 3,772,254 - AO353_17060 0.75 +1.0 3,772,254 - AO353_17060 0.75 +2.0 3,772,406 + AO353_17060 0.89 -1.6 3,772,406 + AO353_17060 0.89 +3.3 3,772,406 + AO353_17060 0.89 -2.6 3,772,406 + AO353_17060 0.89 -1.6 3,772,406 + AO353_17060 0.89 -1.0 3,772,406 + AO353_17060 0.89 +0.0 3,772,407 - AO353_17060 0.89 +1.3 3,772,407 - AO353_17060 0.89 +0.0 3,772,407 - AO353_17060 0.89 -0.2 3,772,407 - AO353_17060 0.89 -0.5 3,772,407 - AO353_17060 0.89 +0.0 3,772,407 - AO353_17060 0.89 +1.6 3,772,407 - +1.0 3,772,409 + AO353_17060 0.89 +0.0 3,772,409 + AO353_17060 0.89 +1.3 3,772,409 + AO353_17060 0.89 +0.6 3,772,410 - AO353_17060 0.89 +0.8 3,772,410 - AO353_17060 0.89 -1.3 3,772,439 + -1.0 3,772,526 + +0.8 3,772,526 + -2.0 3,772,526 + +0.0 3,772,527 - +0.0 3,772,576 + +0.9 3,772,577 - +0.0 3,772,632 - +1.6 3,772,632 - +0.7 3,772,664 + +0.0 3,772,665 - -1.9 3,772,963 + AO353_17065 0.20 -0.6 3,772,963 + AO353_17065 0.20 -0.6 3,772,963 + AO353_17065 0.20 -2.0 3,772,963 + AO353_17065 0.20 +2.0 3,772,964 - AO353_17065 0.20 -0.6 3,772,964 - AO353_17065 0.20 -1.0 3,772,964 - AO353_17065 0.20 +0.0 3,772,964 - AO353_17065 0.20 -1.0 3,772,964 - AO353_17065 0.20 +0.3 3,773,041 + AO353_17065 0.25 -0.3 3,773,041 + AO353_17065 0.25 +0.6 3,773,041 + AO353_17065 0.25 +0.4 3,773,042 - AO353_17065 0.25 -0.6 3,773,042 - AO353_17065 0.25 -2.0 3,773,042 - AO353_17065 0.25 +2.0 3,773,042 - AO353_17065 0.25 -1.0 3,773,042 - AO353_17065 0.25 +0.4 3,773,165 + AO353_17065 0.32 -1.0 3,773,182 + AO353_17065 0.33 +1.6 3,773,267 - AO353_17065 0.39 -0.3 3,773,305 + AO353_17065 0.41 +0.2 3,773,305 + AO353_17065 0.41 +2.0 3,773,306 - AO353_17065 0.41 +0.4 3,773,306 - AO353_17065 0.41 +1.0 3,773,338 + AO353_17065 0.43 +1.6 3,773,338 + AO353_17065 0.43 +0.2 3,773,339 - AO353_17065 0.43 +0.3 3,773,339 - AO353_17065 0.43 +2.2 3,773,339 - AO353_17065 0.43 +0.6 3,773,339 - AO353_17065 0.43 -2.3 3,773,339 - AO353_17065 0.43 -0.4
Or see this region's nucleotide sequence