Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16845 and AO353_16850 are separated by 136 nucleotides AO353_16850 and AO353_16855 are separated by 111 nucleotides
AO353_16845: AO353_16845 - LysR family transcriptional regulator, at 3,727,662 to 3,728,588
_16845
AO353_16850: AO353_16850 - ferredoxin-NADP reductase, at 3,728,725 to 3,729,504
_16850
AO353_16855: AO353_16855 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 3,729,616 to 3,730,314
_16855
Position (kb)
3728
3729
3730 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.760 kb on - strand, within AO353_16845 at 3727.760 kb on - strand, within AO353_16845 at 3727.769 kb on + strand, within AO353_16845 at 3727.770 kb on - strand, within AO353_16845 at 3727.783 kb on + strand, within AO353_16845 at 3727.783 kb on + strand, within AO353_16845 at 3727.869 kb on + strand, within AO353_16845 at 3727.869 kb on + strand, within AO353_16845 at 3727.870 kb on - strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.940 kb on + strand, within AO353_16845 at 3727.941 kb on - strand, within AO353_16845 at 3727.941 kb on - strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.155 kb on - strand, within AO353_16845 at 3728.173 kb on + strand, within AO353_16845 at 3728.278 kb on + strand, within AO353_16845 at 3728.278 kb on + strand, within AO353_16845 at 3728.279 kb on - strand, within AO353_16845 at 3728.574 kb on + strand at 3728.574 kb on + strand at 3728.574 kb on + strand at 3728.579 kb on + strand at 3728.588 kb on + strand at 3728.592 kb on + strand at 3728.634 kb on + strand at 3728.634 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.707 kb on + strand, within AO353_16855 at 3729.708 kb on - strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.811 kb on - strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3730.071 kb on + strand, within AO353_16855 at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.350 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,727,759 + AO353_16845 0.10 +1.1 3,727,759 + AO353_16845 0.10 +0.3 3,727,759 + AO353_16845 0.10 +0.5 3,727,759 + AO353_16845 0.10 -1.4 3,727,759 + AO353_16845 0.10 +2.3 3,727,759 + AO353_16845 0.10 +1.2 3,727,759 + AO353_16845 0.10 +0.6 3,727,760 - AO353_16845 0.11 +1.3 3,727,760 - AO353_16845 0.11 -0.6 3,727,769 + AO353_16845 0.12 +0.3 3,727,770 - AO353_16845 0.12 +1.0 3,727,783 + AO353_16845 0.13 +1.8 3,727,783 + AO353_16845 0.13 +0.3 3,727,869 + AO353_16845 0.22 +0.0 3,727,869 + AO353_16845 0.22 +1.8 3,727,870 - AO353_16845 0.22 +1.7 3,727,871 + AO353_16845 0.23 +2.0 3,727,871 + AO353_16845 0.23 +0.9 3,727,871 + AO353_16845 0.23 +2.0 3,727,871 + AO353_16845 0.23 -1.0 3,727,871 + AO353_16845 0.23 +0.0 3,727,871 + AO353_16845 0.23 -0.7 3,727,871 + AO353_16845 0.23 +0.6 3,727,871 + AO353_16845 0.23 -0.6 3,727,871 + AO353_16845 0.23 -0.3 3,727,871 + AO353_16845 0.23 +1.6 3,727,871 + AO353_16845 0.23 -1.0 3,727,871 + AO353_16845 0.23 +2.3 3,727,871 + AO353_16845 0.23 +3.0 3,727,872 - AO353_16845 0.23 +0.9 3,727,872 - AO353_16845 0.23 +3.3 3,727,872 - AO353_16845 0.23 +1.3 3,727,872 - AO353_16845 0.23 +1.0 3,727,872 - AO353_16845 0.23 +0.0 3,727,872 - AO353_16845 0.23 +1.5 3,727,872 - AO353_16845 0.23 +1.0 3,727,872 - AO353_16845 0.23 +1.6 3,727,872 - AO353_16845 0.23 +1.3 3,727,872 - AO353_16845 0.23 +0.3 3,727,872 - AO353_16845 0.23 +3.3 3,727,872 - AO353_16845 0.23 +0.6 3,727,872 - AO353_16845 0.23 +0.8 3,727,872 - AO353_16845 0.23 +1.0 3,727,940 + AO353_16845 0.30 +1.0 3,727,941 - AO353_16845 0.30 +1.4 3,727,941 - AO353_16845 0.30 -1.1 3,728,118 + AO353_16845 0.49 +0.6 3,728,118 + AO353_16845 0.49 +0.8 3,728,118 + AO353_16845 0.49 +0.7 3,728,118 + AO353_16845 0.49 +1.1 3,728,118 + AO353_16845 0.49 +0.3 3,728,119 - AO353_16845 0.49 +0.0 3,728,119 - AO353_16845 0.49 +1.2 3,728,119 - AO353_16845 0.49 +2.0 3,728,119 - AO353_16845 0.49 -1.6 3,728,155 - AO353_16845 0.53 +1.3 3,728,173 + AO353_16845 0.55 -0.4 3,728,278 + AO353_16845 0.66 +0.0 3,728,278 + AO353_16845 0.66 +0.0 3,728,279 - AO353_16845 0.67 -0.4 3,728,574 + +0.0 3,728,574 + +1.8 3,728,574 + -1.0 3,728,579 + +0.7 3,728,588 + +1.6 3,728,592 + +0.0 3,728,634 + +1.6 3,728,634 + +0.6 3,728,649 + +1.6 3,728,649 + -1.2 3,728,649 + +0.0 3,729,502 + -0.3 3,729,502 + +1.0 3,729,502 + +1.6 3,729,502 + +0.2 3,729,502 + +1.2 3,729,502 + -0.2 3,729,502 + -0.1 3,729,502 + -3.0 3,729,502 + -0.8 3,729,503 - +0.6 3,729,503 - -0.2 3,729,503 - +0.4 3,729,503 - -1.6 3,729,503 - +0.0 3,729,503 - +1.0 3,729,503 - -0.4 3,729,679 + -0.1 3,729,679 + +0.5 3,729,679 + +0.8 3,729,679 + +1.6 3,729,679 + +1.0 3,729,679 + -1.6 3,729,679 + -2.0 3,729,680 - +1.0 3,729,680 - -0.4 3,729,680 - +1.0 3,729,680 - +0.0 3,729,707 + AO353_16855 0.13 +0.0 3,729,708 - AO353_16855 0.13 +0.0 3,729,810 + AO353_16855 0.28 -2.0 3,729,810 + AO353_16855 0.28 +0.6 3,729,811 - AO353_16855 0.28 +0.3 3,729,917 + AO353_16855 0.43 +0.0 3,729,917 + AO353_16855 0.43 +0.0 3,729,918 - AO353_16855 0.43 -2.0 3,729,918 - AO353_16855 0.43 +0.0 3,729,942 + AO353_16855 0.47 -0.2 3,729,942 + AO353_16855 0.47 +0.0 3,730,071 + AO353_16855 0.65 +1.8 3,730,307 + +1.6 3,730,307 + +0.4 3,730,307 + +0.7 3,730,307 + -1.3 3,730,307 + +1.0 3,730,307 + +1.4 3,730,307 + +1.6 3,730,307 + -1.4 3,730,308 - -2.0 3,730,308 - +0.0 3,730,308 - +1.2 3,730,308 - +1.3 3,730,308 - +0.0 3,730,308 - -0.2 3,730,308 - +0.0 3,730,308 - +0.6 3,730,308 - +1.0 3,730,308 - +0.0 3,730,308 - -0.4 3,730,350 + +0.6 3,730,440 + -1.0 3,730,440 + +2.3 3,730,440 + -1.6 3,730,440 + +2.5 3,730,440 + -1.0 3,730,440 + +1.3 3,730,440 + +0.0 3,730,440 + +1.0 3,730,440 + +0.6 3,730,441 - +0.3 3,730,441 - -1.0 3,730,441 - +0.0 3,730,441 - +0.0 3,730,441 - +1.0
Or see this region's nucleotide sequence