Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16015 and AO353_16020 overlap by 4 nucleotides AO353_16020 and AO353_16025 are separated by 253 nucleotides AO353_16025 and AO353_16030 are separated by 2 nucleotides
AO353_16015: AO353_16015 - tRNA (mo5U34)-methyltransferase, at 3,539,841 to 3,540,797
_16015
AO353_16020: AO353_16020 - tRNA (cmo5U34)-methyltransferase, at 3,540,794 to 3,541,537
_16020
AO353_16025: AO353_16025 - hypothetical protein, at 3,541,791 to 3,542,426
_16025
AO353_16030: AO353_16030 - peptidase inhibitor I42, at 3,542,429 to 3,542,821
_16030
Position (kb)
3540
3541
3542 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3539.795 kb on + strand at 3539.795 kb on + strand at 3539.795 kb on + strand at 3539.796 kb on - strand at 3539.796 kb on - strand at 3539.796 kb on - strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.897 kb on + strand at 3539.898 kb on - strand at 3539.898 kb on - strand at 3539.938 kb on + strand, within AO353_16015 at 3539.938 kb on + strand, within AO353_16015 at 3539.938 kb on + strand, within AO353_16015 at 3539.939 kb on - strand, within AO353_16015 at 3539.939 kb on - strand, within AO353_16015 at 3539.939 kb on - strand, within AO353_16015 at 3540.211 kb on + strand, within AO353_16015 at 3540.211 kb on + strand, within AO353_16015 at 3540.211 kb on + strand, within AO353_16015 at 3540.212 kb on - strand, within AO353_16015 at 3540.212 kb on - strand, within AO353_16015 at 3540.212 kb on - strand, within AO353_16015 at 3540.310 kb on + strand, within AO353_16015 at 3540.310 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.403 kb on + strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.404 kb on - strand, within AO353_16015 at 3540.407 kb on - strand, within AO353_16015 at 3540.440 kb on + strand, within AO353_16015 at 3540.440 kb on + strand, within AO353_16015 at 3540.441 kb on - strand, within AO353_16015 at 3540.824 kb on - strand at 3540.824 kb on - strand at 3540.955 kb on - strand, within AO353_16020 at 3540.955 kb on - strand, within AO353_16020 at 3540.955 kb on - strand, within AO353_16020 at 3541.075 kb on + strand, within AO353_16020 at 3541.233 kb on + strand, within AO353_16020 at 3541.234 kb on - strand, within AO353_16020 at 3541.234 kb on - strand, within AO353_16020 at 3541.234 kb on - strand, within AO353_16020 at 3541.234 kb on - strand, within AO353_16020 at 3541.234 kb on - strand, within AO353_16020 at 3541.353 kb on + strand, within AO353_16020 at 3541.353 kb on + strand, within AO353_16020 at 3541.353 kb on - strand, within AO353_16020 at 3541.354 kb on - strand, within AO353_16020 at 3541.409 kb on + strand, within AO353_16020 at 3541.409 kb on + strand, within AO353_16020 at 3541.409 kb on + strand, within AO353_16020 at 3541.410 kb on - strand, within AO353_16020 at 3541.410 kb on - strand, within AO353_16020 at 3541.613 kb on - strand at 3541.613 kb on - strand at 3541.613 kb on - strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.687 kb on + strand at 3541.688 kb on - strand at 3541.688 kb on - strand at 3541.688 kb on - strand at 3541.723 kb on + strand at 3541.723 kb on + strand at 3541.724 kb on - strand at 3541.724 kb on - strand at 3541.744 kb on - strand at 3541.744 kb on - strand at 3541.823 kb on + strand at 3541.823 kb on + strand at 3541.824 kb on - strand at 3541.824 kb on - strand at 3541.824 kb on - strand at 3541.846 kb on + strand at 3541.846 kb on + strand at 3541.846 kb on + strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.847 kb on - strand at 3541.865 kb on - strand, within AO353_16025 at 3541.865 kb on - strand, within AO353_16025 at 3542.030 kb on - strand, within AO353_16025 at 3542.114 kb on + strand, within AO353_16025 at 3542.114 kb on + strand, within AO353_16025 at 3542.115 kb on - strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.152 kb on + strand, within AO353_16025 at 3542.153 kb on - strand, within AO353_16025 at 3542.153 kb on - strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.164 kb on + strand, within AO353_16025 at 3542.165 kb on - strand, within AO353_16025 at 3542.380 kb on + strand at 3542.380 kb on + strand at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.496 kb on + strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030 at 3542.497 kb on - strand, within AO353_16030
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,539,795 + +1.7 3,539,795 + +0.5 3,539,795 + +0.8 3,539,796 - +0.1 3,539,796 - -0.7 3,539,796 - -0.5 3,539,897 + -0.3 3,539,897 + +1.7 3,539,897 + -0.5 3,539,897 + -0.2 3,539,897 + -0.3 3,539,897 + -0.7 3,539,897 + +0.1 3,539,897 + -1.7 3,539,897 + -1.5 3,539,897 + -0.5 3,539,897 + -0.9 3,539,897 + -1.5 3,539,897 + -0.4 3,539,897 + +0.1 3,539,898 - -0.9 3,539,898 - +2.7 3,539,938 + AO353_16015 0.10 +0.1 3,539,938 + AO353_16015 0.10 +1.1 3,539,938 + AO353_16015 0.10 +0.5 3,539,939 - AO353_16015 0.10 -1.5 3,539,939 - AO353_16015 0.10 -0.2 3,539,939 - AO353_16015 0.10 +2.7 3,540,211 + AO353_16015 0.39 -1.5 3,540,211 + AO353_16015 0.39 +0.1 3,540,211 + AO353_16015 0.39 -0.5 3,540,212 - AO353_16015 0.39 +1.1 3,540,212 - AO353_16015 0.39 -0.5 3,540,212 - AO353_16015 0.39 +0.9 3,540,310 + AO353_16015 0.49 -0.9 3,540,310 + AO353_16015 0.49 -1.4 3,540,403 + AO353_16015 0.59 -0.2 3,540,403 + AO353_16015 0.59 -1.5 3,540,403 + AO353_16015 0.59 +1.5 3,540,403 + AO353_16015 0.59 -1.5 3,540,403 + AO353_16015 0.59 -0.9 3,540,403 + AO353_16015 0.59 -1.5 3,540,403 + AO353_16015 0.59 -0.7 3,540,403 + AO353_16015 0.59 +0.1 3,540,403 + AO353_16015 0.59 -0.8 3,540,403 + AO353_16015 0.59 +0.3 3,540,403 + AO353_16015 0.59 -0.4 3,540,403 + AO353_16015 0.59 +0.3 3,540,403 + AO353_16015 0.59 +1.1 3,540,403 + AO353_16015 0.59 +0.1 3,540,403 + AO353_16015 0.59 +1.1 3,540,403 + AO353_16015 0.59 -0.9 3,540,403 + AO353_16015 0.59 -0.9 3,540,403 + AO353_16015 0.59 +0.5 3,540,403 + AO353_16015 0.59 +0.8 3,540,403 + AO353_16015 0.59 +1.4 3,540,403 + AO353_16015 0.59 +0.5 3,540,404 - AO353_16015 0.59 -0.2 3,540,404 - AO353_16015 0.59 -1.3 3,540,404 - AO353_16015 0.59 +1.1 3,540,404 - AO353_16015 0.59 +1.4 3,540,404 - AO353_16015 0.59 -0.9 3,540,404 - AO353_16015 0.59 -0.1 3,540,404 - AO353_16015 0.59 -1.9 3,540,404 - AO353_16015 0.59 -0.3 3,540,404 - AO353_16015 0.59 -0.1 3,540,404 - AO353_16015 0.59 +1.1 3,540,404 - AO353_16015 0.59 +0.2 3,540,404 - AO353_16015 0.59 -0.7 3,540,404 - AO353_16015 0.59 -0.3 3,540,404 - AO353_16015 0.59 +0.1 3,540,404 - AO353_16015 0.59 +1.1 3,540,404 - AO353_16015 0.59 -0.2 3,540,404 - AO353_16015 0.59 +0.4 3,540,404 - AO353_16015 0.59 -1.1 3,540,407 - AO353_16015 0.59 +0.1 3,540,440 + AO353_16015 0.63 -1.2 3,540,440 + AO353_16015 0.63 +1.1 3,540,441 - AO353_16015 0.63 -0.3 3,540,824 - -0.1 3,540,824 - +1.1 3,540,955 - AO353_16020 0.22 -0.9 3,540,955 - AO353_16020 0.22 +0.1 3,540,955 - AO353_16020 0.22 +1.7 3,541,075 + AO353_16020 0.38 +0.1 3,541,233 + AO353_16020 0.59 -2.1 3,541,234 - AO353_16020 0.59 -0.5 3,541,234 - AO353_16020 0.59 -0.6 3,541,234 - AO353_16020 0.59 -0.9 3,541,234 - AO353_16020 0.59 +0.5 3,541,234 - AO353_16020 0.59 +0.3 3,541,353 + AO353_16020 0.75 +1.1 3,541,353 + AO353_16020 0.75 -0.5 3,541,353 - AO353_16020 0.75 +0.1 3,541,354 - AO353_16020 0.75 +0.1 3,541,409 + AO353_16020 0.83 +0.3 3,541,409 + AO353_16020 0.83 -0.5 3,541,409 + AO353_16020 0.83 -0.9 3,541,410 - AO353_16020 0.83 -0.6 3,541,410 - AO353_16020 0.83 -1.5 3,541,613 - -0.7 3,541,613 - +0.9 3,541,613 - +1.1 3,541,687 + -1.5 3,541,687 + +2.4 3,541,687 + +0.5 3,541,687 + +0.6 3,541,687 + +2.2 3,541,688 - -1.2 3,541,688 - -0.3 3,541,688 - +1.1 3,541,723 + +0.1 3,541,723 + +1.2 3,541,724 - -1.2 3,541,724 - -1.1 3,541,744 - -1.2 3,541,744 - +1.7 3,541,823 + +1.7 3,541,823 + +1.4 3,541,824 - +0.2 3,541,824 - +0.5 3,541,824 - -0.9 3,541,846 + -2.5 3,541,846 + -0.9 3,541,846 + +1.1 3,541,847 - -2.5 3,541,847 - +0.1 3,541,847 - +1.1 3,541,847 - +0.7 3,541,847 - +0.1 3,541,865 - AO353_16025 0.12 +0.7 3,541,865 - AO353_16025 0.12 -0.9 3,542,030 - AO353_16025 0.38 -1.9 3,542,114 + AO353_16025 0.51 +2.9 3,542,114 + AO353_16025 0.51 -0.5 3,542,115 - AO353_16025 0.51 +0.1 3,542,152 + AO353_16025 0.57 +0.5 3,542,152 + AO353_16025 0.57 +0.1 3,542,152 + AO353_16025 0.57 -0.9 3,542,153 - AO353_16025 0.57 +0.9 3,542,153 - AO353_16025 0.57 +0.4 3,542,164 + AO353_16025 0.59 -0.3 3,542,164 + AO353_16025 0.59 +0.1 3,542,164 + AO353_16025 0.59 -0.6 3,542,165 - AO353_16025 0.59 -1.5 3,542,380 + +0.1 3,542,380 + +1.7 3,542,496 + AO353_16030 0.17 +0.1 3,542,496 + AO353_16030 0.17 -1.5 3,542,496 + AO353_16030 0.17 +2.1 3,542,496 + AO353_16030 0.17 +1.1 3,542,496 + AO353_16030 0.17 +1.4 3,542,497 - AO353_16030 0.17 +1.3 3,542,497 - AO353_16030 0.17 +0.7 3,542,497 - AO353_16030 0.17 -0.9 3,542,497 - AO353_16030 0.17 +0.5 3,542,497 - AO353_16030 0.17 -0.4 3,542,497 - AO353_16030 0.17 +1.1
Or see this region's nucleotide sequence