Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13880

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_13875 and AO353_13880 are separated by 118 nucleotidesAO353_13880 and AO353_13885 overlap by 14 nucleotides AO353_13875: AO353_13875 - 3-ketoacyl-ACP reductase, at 3,081,879 to 3,083,231 _13875 AO353_13880: AO353_13880 - acetyl-CoA acetyltransferase, at 3,083,350 to 3,084,627 _13880 AO353_13885: AO353_13885 - bile acid:sodium symporter, at 3,084,614 to 3,085,642 _13885 Position (kb) 3083 3084 3085Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.497 kb on + strand, within AO353_13875at 3082.498 kb on - strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.666 kb on + strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.667 kb on - strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.735 kb on + strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3082.736 kb on - strand, within AO353_13875at 3083.026 kb on + strand, within AO353_13875at 3083.027 kb on - strand, within AO353_13875at 3083.027 kb on - strand, within AO353_13875at 3083.027 kb on - strand, within AO353_13875at 3083.032 kb on + strand, within AO353_13875at 3083.032 kb on + strand, within AO353_13875at 3083.032 kb on + strand, within AO353_13875at 3083.032 kb on + strand, within AO353_13875at 3083.032 kb on + strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.033 kb on - strand, within AO353_13875at 3083.218 kb on + strandat 3083.218 kb on + strandat 3083.218 kb on + strandat 3083.218 kb on + strandat 3083.219 kb on - strandat 3083.219 kb on - strandat 3083.219 kb on - strandat 3083.302 kb on + strandat 3083.303 kb on - strandat 3083.303 kb on - strandat 3083.309 kb on + strandat 3083.322 kb on + strandat 3083.323 kb on - strandat 3083.323 kb on - strandat 3083.338 kb on + strandat 3083.338 kb on + strandat 3083.339 kb on - strandat 3083.339 kb on - strandat 3083.339 kb on - strandat 3083.339 kb on - strandat 3083.339 kb on - strandat 3083.339 kb on - strandat 3083.420 kb on - strandat 3083.433 kb on + strandat 3083.479 kb on + strand, within AO353_13880at 3083.479 kb on + strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.480 kb on - strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.602 kb on + strand, within AO353_13880at 3083.603 kb on - strand, within AO353_13880at 3083.603 kb on - strand, within AO353_13880at 3083.603 kb on - strand, within AO353_13880at 3084.335 kb on - strand, within AO353_13880at 3084.335 kb on - strand, within AO353_13880at 3084.337 kb on + strand, within AO353_13880at 3084.337 kb on + strand, within AO353_13880at 3084.338 kb on - strand, within AO353_13880at 3084.403 kb on + strand, within AO353_13880at 3084.404 kb on - strand, within AO353_13880at 3084.615 kb on + strandat 3084.616 kb on - strandat 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.720 kb on + strand, within AO353_13885at 3084.721 kb on - strand, within AO353_13885at 3084.721 kb on - strand, within AO353_13885at 3084.721 kb on - strand, within AO353_13885at 3084.721 kb on - strand, within AO353_13885at 3084.721 kb on - strand, within AO353_13885at 3084.941 kb on - strand, within AO353_13885at 3085.184 kb on + strand, within AO353_13885at 3085.185 kb on - strand, within AO353_13885at 3085.209 kb on - strand, within AO353_13885at 3085.209 kb on - strand, within AO353_13885at 3085.311 kb on + strand, within AO353_13885at 3085.311 kb on + strand, within AO353_13885at 3085.312 kb on - strand, within AO353_13885at 3085.312 kb on - strand, within AO353_13885at 3085.312 kb on - strand, within AO353_13885at 3085.312 kb on - strand, within AO353_13885at 3085.368 kb on - strand, within AO353_13885at 3085.376 kb on + strand, within AO353_13885at 3085.376 kb on + strand, within AO353_13885at 3085.377 kb on - strand, within AO353_13885at 3085.377 kb on - strand, within AO353_13885

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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3,082,497 + AO353_13875 0.46 +1.0
3,082,497 + AO353_13875 0.46 +0.9
3,082,497 + AO353_13875 0.46 -2.3
3,082,497 + AO353_13875 0.46 -1.3
3,082,497 + AO353_13875 0.46 +2.9
3,082,497 + AO353_13875 0.46 -0.4
3,082,497 + AO353_13875 0.46 +1.6
3,082,498 - AO353_13875 0.46 -0.7
3,082,666 + AO353_13875 0.58 +1.0
3,082,666 + AO353_13875 0.58 -0.7
3,082,666 + AO353_13875 0.58 -0.1
3,082,666 + AO353_13875 0.58 +1.3
3,082,666 + AO353_13875 0.58 +0.7
3,082,666 + AO353_13875 0.58 +1.6
3,082,666 + AO353_13875 0.58 +0.1
3,082,666 + AO353_13875 0.58 -1.0
3,082,666 + AO353_13875 0.58 +0.7
3,082,666 + AO353_13875 0.58 +1.5
3,082,666 + AO353_13875 0.58 +0.5
3,082,666 + AO353_13875 0.58 -1.3
3,082,666 + AO353_13875 0.58 -0.1
3,082,666 + AO353_13875 0.58 -1.7
3,082,666 + AO353_13875 0.58 +1.1
3,082,666 + AO353_13875 0.58 -0.3
3,082,667 - AO353_13875 0.58 +1.3
3,082,667 - AO353_13875 0.58 -0.1
3,082,667 - AO353_13875 0.58 -0.7
3,082,667 - AO353_13875 0.58 +2.3
3,082,667 - AO353_13875 0.58 -0.7
3,082,667 - AO353_13875 0.58 +0.8
3,082,667 - AO353_13875 0.58 +0.1
3,082,667 - AO353_13875 0.58 +1.3
3,082,667 - AO353_13875 0.58 +0.4
3,082,667 - AO353_13875 0.58 +1.9
3,082,667 - AO353_13875 0.58 -0.5
3,082,667 - AO353_13875 0.58 +1.2
3,082,667 - AO353_13875 0.58 -0.3
3,082,667 - AO353_13875 0.58 +0.3
3,082,667 - AO353_13875 0.58 -0.1
3,082,667 - AO353_13875 0.58 +0.3
3,082,735 + AO353_13875 0.63 -0.6
3,082,735 + AO353_13875 0.63 +0.6
3,082,735 + AO353_13875 0.63 +1.9
3,082,735 + AO353_13875 0.63 -1.7
3,082,735 + AO353_13875 0.63 +0.1
3,082,735 + AO353_13875 0.63 -0.7
3,082,735 + AO353_13875 0.63 +0.3
3,082,735 + AO353_13875 0.63 -0.1
3,082,735 + AO353_13875 0.63 -0.3
3,082,735 + AO353_13875 0.63 -2.0
3,082,735 + AO353_13875 0.63 +0.6
3,082,735 + AO353_13875 0.63 -0.3
3,082,735 + AO353_13875 0.63 +1.9
3,082,736 - AO353_13875 0.63 +1.3
3,082,736 - AO353_13875 0.63 -0.3
3,082,736 - AO353_13875 0.63 -1.0
3,082,736 - AO353_13875 0.63 +0.9
3,082,736 - AO353_13875 0.63 +2.6
3,082,736 - AO353_13875 0.63 +1.9
3,082,736 - AO353_13875 0.63 +0.3
3,082,736 - AO353_13875 0.63 +1.9
3,082,736 - AO353_13875 0.63 +1.9
3,083,026 + AO353_13875 0.85 +0.3
3,083,027 - AO353_13875 0.85 -0.3
3,083,027 - AO353_13875 0.85 +0.3
3,083,027 - AO353_13875 0.85 +1.9
3,083,032 + AO353_13875 0.85 +0.3
3,083,032 + AO353_13875 0.85 -0.3
3,083,032 + AO353_13875 0.85 -0.4
3,083,032 + AO353_13875 0.85 +0.3
3,083,032 + AO353_13875 0.85 -0.1
3,083,033 - AO353_13875 0.85 -0.6
3,083,033 - AO353_13875 0.85 -0.1
3,083,033 - AO353_13875 0.85 +1.3
3,083,033 - AO353_13875 0.85 -0.5
3,083,033 - AO353_13875 0.85 +2.8
3,083,033 - AO353_13875 0.85 -0.2
3,083,218 + +0.7
3,083,218 + -0.7
3,083,218 + +1.3
3,083,218 + +0.3
3,083,219 - +0.9
3,083,219 - +2.6
3,083,219 - +0.8
3,083,302 + +0.7
3,083,303 - -1.0
3,083,303 - -0.9
3,083,309 + +0.3
3,083,322 + -1.3
3,083,323 - +0.3
3,083,323 - +1.4
3,083,338 + +1.9
3,083,338 + +2.3
3,083,339 - +1.3
3,083,339 - +0.8
3,083,339 - -0.3
3,083,339 - +1.9
3,083,339 - -0.1
3,083,339 - +0.6
3,083,420 - +0.8
3,083,433 + +1.0
3,083,479 + AO353_13880 0.10 +0.7
3,083,479 + AO353_13880 0.10 -0.7
3,083,480 - AO353_13880 0.10 +0.3
3,083,480 - AO353_13880 0.10 +1.3
3,083,480 - AO353_13880 0.10 -2.3
3,083,480 - AO353_13880 0.10 -0.3
3,083,480 - AO353_13880 0.10 +0.3
3,083,480 - AO353_13880 0.10 +2.3
3,083,480 - AO353_13880 0.10 -0.7
3,083,480 - AO353_13880 0.10 +0.3
3,083,480 - AO353_13880 0.10 +0.3
3,083,602 + AO353_13880 0.20 -0.1
3,083,602 + AO353_13880 0.20 +0.3
3,083,602 + AO353_13880 0.20 -0.7
3,083,602 + AO353_13880 0.20 +0.9
3,083,602 + AO353_13880 0.20 -0.3
3,083,602 + AO353_13880 0.20 -0.7
3,083,603 - AO353_13880 0.20 -0.7
3,083,603 - AO353_13880 0.20 -1.3
3,083,603 - AO353_13880 0.20 -0.3
3,084,335 - AO353_13880 0.77 -2.0
3,084,335 - AO353_13880 0.77 -1.0
3,084,337 + AO353_13880 0.77 +1.7
3,084,337 + AO353_13880 0.77 +0.3
3,084,338 - AO353_13880 0.77 -2.5
3,084,403 + AO353_13880 0.82 +0.8
3,084,404 - AO353_13880 0.82 -0.7
3,084,615 + +0.3
3,084,616 - +1.0
3,084,720 + AO353_13885 0.10 +1.3
3,084,720 + AO353_13885 0.10 +0.9
3,084,720 + AO353_13885 0.10 -0.7
3,084,720 + AO353_13885 0.10 +0.3
3,084,720 + AO353_13885 0.10 -1.3
3,084,720 + AO353_13885 0.10 +0.3
3,084,720 + AO353_13885 0.10 +0.3
3,084,720 + AO353_13885 0.10 +0.6
3,084,720 + AO353_13885 0.10 +0.3
3,084,720 + AO353_13885 0.10 +1.3
3,084,720 + AO353_13885 0.10 -0.3
3,084,721 - AO353_13885 0.10 +2.1
3,084,721 - AO353_13885 0.10 -0.9
3,084,721 - AO353_13885 0.10 -0.4
3,084,721 - AO353_13885 0.10 -0.3
3,084,721 - AO353_13885 0.10 +0.3
3,084,941 - AO353_13885 0.32 +0.3
3,085,184 + AO353_13885 0.55 +0.0
3,085,185 - AO353_13885 0.55 +0.7
3,085,209 - AO353_13885 0.58 -0.3
3,085,209 - AO353_13885 0.58 +0.9
3,085,311 + AO353_13885 0.68 +3.1
3,085,311 + AO353_13885 0.68 -1.3
3,085,312 - AO353_13885 0.68 +0.3
3,085,312 - AO353_13885 0.68 +0.5
3,085,312 - AO353_13885 0.68 -0.3
3,085,312 - AO353_13885 0.68 -0.3
3,085,368 - AO353_13885 0.73 -0.1
3,085,376 + AO353_13885 0.74 -1.3
3,085,376 + AO353_13885 0.74 -0.4
3,085,377 - AO353_13885 0.74 -0.4
3,085,377 - AO353_13885 0.74 -1.7

Or see this region's nucleotide sequence