Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13140 and AO353_13145 are separated by 93 nucleotides AO353_13145 and AO353_13150 are separated by 12 nucleotides AO353_13150 and AO353_13155 are separated by 96 nucleotides
AO353_13140: AO353_13140 - tRNA dimethylallyltransferase, at 2,912,523 to 2,913,494
_13140
AO353_13145: AO353_13145 - RNA-binding protein, at 2,913,588 to 2,913,848
_13145
AO353_13150: AO353_13150 - GTPase HflX, at 2,913,861 to 2,915,162
_13150
AO353_13155: AO353_13155 - hypothetical protein, at 2,915,259 to 2,916,425
_13155
Position (kb)
2913
2914
2915
2916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2913.050 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.180 kb on - strand, within AO353_13140 at 2913.183 kb on - strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.277 kb on + strand, within AO353_13140 at 2913.278 kb on - strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.287 kb on - strand, within AO353_13140 at 2913.415 kb on + strand at 2913.465 kb on + strand at 2913.513 kb on + strand at 2913.535 kb on + strand at 2913.548 kb on + strand at 2913.548 kb on + strand at 2913.552 kb on + strand at 2913.552 kb on + strand at 2913.558 kb on + strand at 2913.558 kb on + strand at 2913.558 kb on + strand at 2913.572 kb on + strand at 2913.839 kb on + strand at 2913.849 kb on + strand at 2913.849 kb on + strand at 2913.849 kb on + strand at 2913.850 kb on - strand at 2913.998 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.097 kb on + strand, within AO353_13150 at 2914.097 kb on + strand, within AO353_13150 at 2914.098 kb on - strand, within AO353_13150 at 2914.133 kb on + strand, within AO353_13150 at 2914.133 kb on + strand, within AO353_13150 at 2914.134 kb on - strand, within AO353_13150 at 2914.190 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.262 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.477 kb on - strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.607 kb on - strand, within AO353_13150 at 2914.670 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.811 kb on + strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2915.160 kb on + strand at 2915.160 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.292 kb on - strand at 2915.312 kb on + strand at 2915.502 kb on + strand, within AO353_13155 at 2915.514 kb on + strand, within AO353_13155 at 2915.562 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.596 kb on - strand, within AO353_13155 at 2915.619 kb on + strand, within AO353_13155 at 2915.650 kb on - strand, within AO353_13155 at 2915.716 kb on - strand, within AO353_13155
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,913,050 + AO353_13140 0.54 -1.2 2,913,125 + AO353_13140 0.62 -1.2 2,913,125 + AO353_13140 0.62 -0.4 2,913,126 - AO353_13140 0.62 -2.0 2,913,126 - AO353_13140 0.62 -1.6 2,913,126 - AO353_13140 0.62 -1.2 2,913,180 - AO353_13140 0.68 +1.4 2,913,183 - AO353_13140 0.68 -2.2 2,913,242 + AO353_13140 0.74 -1.5 2,913,242 + AO353_13140 0.74 -1.6 2,913,242 + AO353_13140 0.74 -1.2 2,913,277 + AO353_13140 0.78 +0.4 2,913,278 - AO353_13140 0.78 -2.2 2,913,286 + AO353_13140 0.78 +0.4 2,913,286 + AO353_13140 0.78 -1.2 2,913,287 - AO353_13140 0.79 +0.4 2,913,415 + +1.0 2,913,465 + +0.4 2,913,513 + -0.6 2,913,535 + +1.2 2,913,548 + -1.0 2,913,548 + +0.7 2,913,552 + +2.0 2,913,552 + -0.2 2,913,558 + +0.9 2,913,558 + +2.7 2,913,558 + +2.2 2,913,572 + +0.1 2,913,839 + +0.4 2,913,849 + +0.7 2,913,849 + -1.2 2,913,849 + +0.4 2,913,850 - -0.6 2,913,998 + AO353_13150 0.11 -2.2 2,914,029 + AO353_13150 0.13 -0.6 2,914,029 + AO353_13150 0.13 +0.8 2,914,029 + AO353_13150 0.13 -1.4 2,914,029 + AO353_13150 0.13 -0.4 2,914,029 + AO353_13150 0.13 -1.0 2,914,030 - AO353_13150 0.13 +0.6 2,914,030 - AO353_13150 0.13 -0.2 2,914,030 - AO353_13150 0.13 +0.4 2,914,030 - AO353_13150 0.13 -1.0 2,914,030 - AO353_13150 0.13 -1.6 2,914,030 - AO353_13150 0.13 -0.5 2,914,097 + AO353_13150 0.18 -1.6 2,914,097 + AO353_13150 0.18 +0.4 2,914,098 - AO353_13150 0.18 +0.4 2,914,133 + AO353_13150 0.21 +0.1 2,914,133 + AO353_13150 0.21 -2.2 2,914,134 - AO353_13150 0.21 -1.6 2,914,190 + AO353_13150 0.25 -0.6 2,914,254 + AO353_13150 0.30 -1.0 2,914,254 + AO353_13150 0.30 -2.0 2,914,254 + AO353_13150 0.30 -0.6 2,914,254 + AO353_13150 0.30 +0.7 2,914,254 + AO353_13150 0.30 +0.1 2,914,254 + AO353_13150 0.30 -1.5 2,914,255 - AO353_13150 0.30 -0.2 2,914,255 - AO353_13150 0.30 -0.0 2,914,255 - AO353_13150 0.30 -1.0 2,914,255 - AO353_13150 0.30 -0.6 2,914,255 - AO353_13150 0.30 +0.4 2,914,255 - AO353_13150 0.30 -0.2 2,914,255 - AO353_13150 0.30 -1.6 2,914,262 + AO353_13150 0.31 -1.2 2,914,476 + AO353_13150 0.47 -0.6 2,914,476 + AO353_13150 0.47 -0.6 2,914,477 - AO353_13150 0.47 +1.0 2,914,478 + AO353_13150 0.47 -0.9 2,914,478 + AO353_13150 0.47 +1.5 2,914,478 + AO353_13150 0.47 -0.9 2,914,478 + AO353_13150 0.47 -0.6 2,914,478 + AO353_13150 0.47 -0.5 2,914,479 - AO353_13150 0.47 -1.2 2,914,479 - AO353_13150 0.47 +3.0 2,914,607 - AO353_13150 0.57 +2.4 2,914,670 + AO353_13150 0.62 +0.4 2,914,809 + AO353_13150 0.73 +0.1 2,914,809 + AO353_13150 0.73 -0.2 2,914,809 + AO353_13150 0.73 -0.9 2,914,809 + AO353_13150 0.73 -2.8 2,914,809 + AO353_13150 0.73 +2.2 2,914,809 + AO353_13150 0.73 -0.2 2,914,810 - AO353_13150 0.73 -1.2 2,914,810 - AO353_13150 0.73 +0.4 2,914,810 - AO353_13150 0.73 +0.8 2,914,811 + AO353_13150 0.73 -0.4 2,914,812 - AO353_13150 0.73 -2.4 2,914,812 - AO353_13150 0.73 -0.3 2,914,812 - AO353_13150 0.73 -1.2 2,915,160 + -0.6 2,915,160 + -0.1 2,915,204 + -0.4 2,915,204 + -0.6 2,915,204 + +0.4 2,915,204 + -1.2 2,915,204 + -1.2 2,915,292 - -0.2 2,915,312 + -1.6 2,915,502 + AO353_13155 0.21 -1.0 2,915,514 + AO353_13155 0.22 +2.0 2,915,562 + AO353_13155 0.26 -2.0 2,915,595 + AO353_13155 0.29 +0.4 2,915,595 + AO353_13155 0.29 +1.0 2,915,595 + AO353_13155 0.29 -2.4 2,915,596 - AO353_13155 0.29 -0.6 2,915,619 + AO353_13155 0.31 +2.0 2,915,650 - AO353_13155 0.34 -1.2 2,915,716 - AO353_13155 0.39 -0.6
Or see this region's nucleotide sequence