Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07965

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_07960 and AO353_07965 are separated by 18 nucleotidesAO353_07965 and AO353_07970 are separated by 158 nucleotides AO353_07960: AO353_07960 - ArsR family transcriptional regulator, at 1,755,472 to 1,756,467 _07960 AO353_07965: AO353_07965 - S-adenosylmethionine synthetase, at 1,756,486 to 1,757,676 _07965 AO353_07970: AO353_07970 - aromatic ring-opening dioxygenase LigA, at 1,757,835 to 1,759,517 _07970 Position (kb) 1756 1757 1758Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1756.056 kb on + strand, within AO353_07960at 1756.148 kb on + strand, within AO353_07960at 1756.148 kb on + strand, within AO353_07960at 1756.172 kb on + strand, within AO353_07960at 1756.172 kb on + strand, within AO353_07960at 1756.172 kb on + strand, within AO353_07960at 1756.172 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.271 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.275 kb on + strand, within AO353_07960at 1756.390 kb on + strandat 1756.390 kb on + strandat 1756.390 kb on + strandat 1756.390 kb on + strandat 1756.390 kb on + strandat 1756.390 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.394 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.400 kb on + strandat 1756.404 kb on + strandat 1756.404 kb on + strandat 1756.404 kb on + strandat 1756.404 kb on + strandat 1756.404 kb on + strandat 1756.404 kb on + strandat 1757.675 kb on - strandat 1757.675 kb on - strandat 1757.675 kb on - strandat 1757.675 kb on - strandat 1757.797 kb on + strandat 1757.797 kb on + strandat 1757.797 kb on + strandat 1757.797 kb on + strandat 1757.798 kb on - strandat 1757.798 kb on - strandat 1757.798 kb on - strandat 1757.798 kb on - strandat 1757.798 kb on - strandat 1757.798 kb on - strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.903 kb on + strandat 1757.904 kb on - strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.985 kb on + strandat 1757.986 kb on - strandat 1757.986 kb on - strandat 1757.986 kb on - strandat 1757.986 kb on - strandat 1758.024 kb on + strand, within AO353_07970at 1758.024 kb on + strand, within AO353_07970at 1758.024 kb on + strand, within AO353_07970at 1758.024 kb on + strand, within AO353_07970at 1758.025 kb on - strand, within AO353_07970at 1758.025 kb on - strand, within AO353_07970at 1758.201 kb on - strand, within AO353_07970at 1758.246 kb on + strand, within AO353_07970at 1758.291 kb on - strand, within AO353_07970at 1758.387 kb on + strand, within AO353_07970at 1758.387 kb on + strand, within AO353_07970at 1758.387 kb on + strand, within AO353_07970at 1758.387 kb on + strand, within AO353_07970at 1758.388 kb on - strand, within AO353_07970at 1758.388 kb on - strand, within AO353_07970at 1758.388 kb on - strand, within AO353_07970at 1758.505 kb on + strand, within AO353_07970at 1758.506 kb on - strand, within AO353_07970at 1758.506 kb on - strand, within AO353_07970at 1758.594 kb on + strand, within AO353_07970at 1758.594 kb on + strand, within AO353_07970at 1758.594 kb on + strand, within AO353_07970at 1758.595 kb on - strand, within AO353_07970at 1758.595 kb on - strand, within AO353_07970at 1758.595 kb on - strand, within AO353_07970at 1758.648 kb on + strand, within AO353_07970

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,756,056 + AO353_07960 0.59 -1.2
1,756,148 + AO353_07960 0.68 -0.6
1,756,148 + AO353_07960 0.68 -0.6
1,756,172 + AO353_07960 0.70 +1.4
1,756,172 + AO353_07960 0.70 -2.4
1,756,172 + AO353_07960 0.70 +1.4
1,756,172 + AO353_07960 0.70 +0.1
1,756,271 + AO353_07960 0.80 +1.4
1,756,271 + AO353_07960 0.80 +0.4
1,756,271 + AO353_07960 0.80 +0.4
1,756,271 + AO353_07960 0.80 -1.6
1,756,271 + AO353_07960 0.80 +1.9
1,756,271 + AO353_07960 0.80 +1.3
1,756,271 + AO353_07960 0.80 -0.6
1,756,271 + AO353_07960 0.80 -0.8
1,756,271 + AO353_07960 0.80 +1.2
1,756,271 + AO353_07960 0.80 -2.8
1,756,271 + AO353_07960 0.80 -0.1
1,756,271 + AO353_07960 0.80 +1.3
1,756,271 + AO353_07960 0.80 -1.2
1,756,271 + AO353_07960 0.80 -2.2
1,756,271 + AO353_07960 0.80 +1.5
1,756,271 + AO353_07960 0.80 -0.9
1,756,271 + AO353_07960 0.80 -0.6
1,756,271 + AO353_07960 0.80 -0.1
1,756,275 + AO353_07960 0.81 +0.8
1,756,275 + AO353_07960 0.81 -1.2
1,756,275 + AO353_07960 0.81 +1.1
1,756,275 + AO353_07960 0.81 -1.2
1,756,275 + AO353_07960 0.81 -0.6
1,756,275 + AO353_07960 0.81 +1.0
1,756,390 + -0.6
1,756,390 + -0.6
1,756,390 + -0.6
1,756,390 + +1.2
1,756,390 + +3.0
1,756,390 + -0.5
1,756,394 + +0.4
1,756,394 + +0.6
1,756,394 + -1.0
1,756,394 + +0.1
1,756,394 + -0.2
1,756,394 + +0.7
1,756,394 + +0.6
1,756,394 + +1.1
1,756,400 + +2.0
1,756,400 + -0.6
1,756,400 + -1.2
1,756,400 + +0.8
1,756,400 + +1.4
1,756,400 + +0.6
1,756,400 + -0.2
1,756,400 + -1.1
1,756,400 + -1.2
1,756,404 + +1.1
1,756,404 + -0.6
1,756,404 + -1.9
1,756,404 + +1.4
1,756,404 + -0.3
1,756,404 + +1.0
1,757,675 - -1.2
1,757,675 - +0.4
1,757,675 - +1.7
1,757,675 - -0.0
1,757,797 + +1.1
1,757,797 + +0.2
1,757,797 + +0.4
1,757,797 + -1.9
1,757,798 - +2.0
1,757,798 - +0.4
1,757,798 - +1.0
1,757,798 - -0.5
1,757,798 - -0.3
1,757,798 - +0.5
1,757,903 + +0.8
1,757,903 + -0.6
1,757,903 + -1.0
1,757,903 + -0.0
1,757,903 + -0.9
1,757,903 + +1.4
1,757,903 + -0.3
1,757,903 + +0.4
1,757,904 - +1.1
1,757,985 + -2.2
1,757,985 + +1.4
1,757,985 + -0.6
1,757,985 + +0.1
1,757,985 + -0.5
1,757,985 + +0.4
1,757,985 + -0.6
1,757,986 - -0.6
1,757,986 - -0.2
1,757,986 - -1.6
1,757,986 - +0.4
1,758,024 + AO353_07970 0.11 -0.2
1,758,024 + AO353_07970 0.11 -1.6
1,758,024 + AO353_07970 0.11 +2.0
1,758,024 + AO353_07970 0.11 +0.6
1,758,025 - AO353_07970 0.11 +0.4
1,758,025 - AO353_07970 0.11 +0.4
1,758,201 - AO353_07970 0.22 -1.2
1,758,246 + AO353_07970 0.24 +1.4
1,758,291 - AO353_07970 0.27 -0.4
1,758,387 + AO353_07970 0.33 +1.4
1,758,387 + AO353_07970 0.33 +0.4
1,758,387 + AO353_07970 0.33 -1.8
1,758,387 + AO353_07970 0.33 +2.2
1,758,388 - AO353_07970 0.33 +3.2
1,758,388 - AO353_07970 0.33 +2.0
1,758,388 - AO353_07970 0.33 -1.2
1,758,505 + AO353_07970 0.40 +0.4
1,758,506 - AO353_07970 0.40 -1.4
1,758,506 - AO353_07970 0.40 +1.4
1,758,594 + AO353_07970 0.45 +0.2
1,758,594 + AO353_07970 0.45 +1.4
1,758,594 + AO353_07970 0.45 +1.0
1,758,595 - AO353_07970 0.45 +0.4
1,758,595 - AO353_07970 0.45 +0.2
1,758,595 - AO353_07970 0.45 +1.6
1,758,648 + AO353_07970 0.48 +0.4

Or see this region's nucleotide sequence