Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01410 and AO353_01415 are separated by 198 nucleotides AO353_01415 and AO353_01420 overlap by 1 nucleotides AO353_01420 and AO353_01425 overlap by 4 nucleotides AO353_01425 and AO353_01430 are separated by 136 nucleotides
AO353_01410: AO353_01410 - ribonuclease E, at 301,697 to 304,882
_01410
AO353_01415: AO353_01415 - molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 305,081 to 305,686
_01415
AO353_01420: AO353_01420 - acylaldehyde oxidase, at 305,686 to 308,001
_01420
AO353_01425: AO353_01425 - (2Fe-2S)-binding protein, at 307,998 to 308,468
_01425
AO353_01430: AO353_01430 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 308,605 to 309,624
_01430
Position (kb) 305
306
307
308
309 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 304.933 kb on + strand at 304.992 kb on + strand at 305.000 kb on + strand at 305.000 kb on + strand at 305.001 kb on - strand at 305.001 kb on - strand at 305.001 kb on - strand at 305.001 kb on - strand at 305.038 kb on + strand at 305.039 kb on - strand at 305.039 kb on - strand at 305.039 kb on - strand at 305.052 kb on - strand at 305.082 kb on + strand at 305.082 kb on + strand at 305.082 kb on + strand at 305.082 kb on + strand at 305.082 kb on + strand at 305.083 kb on - strand at 305.138 kb on + strand at 305.314 kb on + strand, within AO353_01415 at 305.314 kb on + strand, within AO353_01415 at 305.314 kb on + strand, within AO353_01415 at 305.329 kb on + strand, within AO353_01415 at 305.330 kb on - strand, within AO353_01415 at 305.330 kb on - strand, within AO353_01415 at 305.330 kb on - strand, within AO353_01415 at 305.330 kb on - strand, within AO353_01415 at 305.338 kb on + strand, within AO353_01415 at 305.445 kb on + strand, within AO353_01415 at 305.445 kb on + strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.446 kb on - strand, within AO353_01415 at 305.742 kb on + strand at 305.742 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.897 kb on + strand at 305.898 kb on - strand at 305.898 kb on - strand at 305.898 kb on - strand at 305.898 kb on - strand at 305.898 kb on - strand at 305.901 kb on + strand at 305.901 kb on + strand at 305.901 kb on + strand at 305.901 kb on + strand at 305.901 kb on + strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 305.902 kb on - strand at 306.051 kb on + strand, within AO353_01420 at 306.051 kb on + strand, within AO353_01420 at 306.051 kb on + strand, within AO353_01420 at 306.052 kb on - strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.107 kb on + strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand, within AO353_01420 at 306.108 kb on - strand at 306.108 kb on - strand, within AO353_01420 at 306.122 kb on + strand, within AO353_01420 at 306.122 kb on + strand, within AO353_01420 at 306.122 kb on + strand, within AO353_01420 at 306.123 kb on - strand, within AO353_01420 at 306.123 kb on - strand, within AO353_01420 at 306.162 kb on + strand, within AO353_01420 at 306.162 kb on + strand, within AO353_01420 at 306.162 kb on + strand, within AO353_01420 at 306.163 kb on - strand, within AO353_01420 at 306.163 kb on - strand, within AO353_01420 at 306.251 kb on + strand, within AO353_01420 at 306.251 kb on + strand, within AO353_01420 at 306.251 kb on + strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.252 kb on - strand, within AO353_01420 at 306.471 kb on - strand, within AO353_01420 at 306.585 kb on + strand, within AO353_01420 at 306.586 kb on - strand, within AO353_01420 at 306.586 kb on - strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.614 kb on + strand, within AO353_01420 at 306.638 kb on + strand, within AO353_01420 at 306.638 kb on + strand, within AO353_01420 at 306.638 kb on + strand, within AO353_01420 at 306.638 kb on + strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.639 kb on - strand, within AO353_01420 at 306.935 kb on + strand, within AO353_01420 at 306.935 kb on + strand, within AO353_01420 at 306.935 kb on + strand, within AO353_01420 at 306.935 kb on + strand, within AO353_01420 at 306.935 kb on + strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand, within AO353_01420 at 306.936 kb on - strand at 306.938 kb on + strand, within AO353_01420 at 306.938 kb on + strand, within AO353_01420 at 306.938 kb on + strand, within AO353_01420 at 306.938 kb on + strand, within AO353_01420 at 306.938 kb on + strand, within AO353_01420 at 306.938 kb on + strand, within AO353_01420 at 306.939 kb on - strand, within AO353_01420 at 306.939 kb on - strand, within AO353_01420 at 306.939 kb on - strand, within AO353_01420 at 306.939 kb on - strand, within AO353_01420 at 307.047 kb on - strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.128 kb on + strand, within AO353_01420 at 307.129 kb on - strand, within AO353_01420 at 307.129 kb on - strand, within AO353_01420 at 307.129 kb on - strand, within AO353_01420 at 307.129 kb on - strand, within AO353_01420 at 307.265 kb on + strand, within AO353_01420 at 307.325 kb on + strand, within AO353_01420 at 307.368 kb on + strand, within AO353_01420 at 307.369 kb on - strand, within AO353_01420 at 307.386 kb on + strand, within AO353_01420 at 307.386 kb on + strand, within AO353_01420 at 307.388 kb on + strand, within AO353_01420 at 307.389 kb on - strand, within AO353_01420 at 307.504 kb on - strand, within AO353_01420 at 307.614 kb on - strand, within AO353_01420 at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.818 kb on - strand at 307.818 kb on - strand at 307.818 kb on - strand at 307.968 kb on + strand at 307.968 kb on + strand at 307.969 kb on - strand at 307.969 kb on - strand at 307.969 kb on - strand at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.060 kb on - strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.322 kb on - strand, within AO353_01425 at 308.462 kb on + strand at 308.462 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.494 kb on + strand at 308.494 kb on + strand at 308.494 kb on + strand at 308.526 kb on - strand at 308.526 kb on - strand at 308.526 kb on - strand at 308.530 kb on + strand at 308.530 kb on + strand at 308.530 kb on + strand at 308.601 kb on + strand at 308.602 kb on - strand at 308.602 kb on - strand at 308.610 kb on - strand at 308.610 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 304,933 + +0.6 304,992 + -0.1 305,000 + +1.2 305,000 + -1.1 305,001 - -0.1 305,001 - -0.6 305,001 - +0.6 305,001 - +1.5 305,038 + -1.1 305,039 - -0.1 305,039 - +1.2 305,039 - +0.7 305,052 - -0.5 305,082 + +0.9 305,082 + +0.3 305,082 + +0.3 305,082 + -1.7 305,082 + +1.2 305,083 - -0.5 305,138 + +3.1 305,314 + AO353_01415 0.38 -0.9 305,314 + AO353_01415 0.38 -0.4 305,314 + AO353_01415 0.38 -0.1 305,329 + AO353_01415 0.41 +1.5 305,330 - AO353_01415 0.41 -0.1 305,330 - AO353_01415 0.41 -1.1 305,330 - AO353_01415 0.41 -0.1 305,330 - AO353_01415 0.41 +0.9 305,338 + AO353_01415 0.42 +1.9 305,445 + AO353_01415 0.60 +0.9 305,445 + AO353_01415 0.60 +0.6 305,446 - AO353_01415 0.60 +0.1 305,446 - AO353_01415 0.60 +1.5 305,446 - AO353_01415 0.60 -0.7 305,446 - AO353_01415 0.60 +0.1 305,446 - AO353_01415 0.60 -1.1 305,446 - AO353_01415 0.60 -1.4 305,742 + -1.1 305,742 + +0.6 305,897 + +0.9 305,897 + -0.9 305,897 + -1.1 305,897 + +1.3 305,897 + +2.5 305,897 + +0.9 305,897 + -0.1 305,897 + +1.5 305,897 + +0.3 305,897 + +0.2 305,897 + -2.4 305,897 + +2.5 305,897 + +0.9 305,897 + -0.6 305,898 - -0.1 305,898 - -1.1 305,898 - -0.1 305,898 - +0.5 305,898 - +0.4 305,901 + +0.3 305,901 + -0.1 305,901 + -0.5 305,901 + -0.5 305,901 + +0.2 305,902 - +0.5 305,902 - +0.2 305,902 - +0.1 305,902 - +0.5 305,902 - -1.1 305,902 - +0.8 305,902 - +1.2 305,902 - -0.7 305,902 - -0.7 306,051 + AO353_01420 0.16 -0.1 306,051 + AO353_01420 0.16 -1.1 306,051 + AO353_01420 0.16 -0.4 306,052 - AO353_01420 0.16 -1.1 306,107 + AO353_01420 0.18 +2.2 306,107 + AO353_01420 0.18 -1.7 306,107 + +0.9 306,107 + AO353_01420 0.18 -1.1 306,107 + AO353_01420 0.18 +0.5 306,107 + AO353_01420 0.18 -0.5 306,107 + AO353_01420 0.18 -0.1 306,107 + AO353_01420 0.18 +0.3 306,108 - AO353_01420 0.18 -0.6 306,108 - AO353_01420 0.18 -0.5 306,108 - AO353_01420 0.18 +0.3 306,108 - AO353_01420 0.18 -0.1 306,108 - AO353_01420 0.18 +2.7 306,108 - AO353_01420 0.18 -0.9 306,108 - AO353_01420 0.18 +0.0 306,108 - -0.1 306,108 - AO353_01420 0.18 -0.1 306,122 + AO353_01420 0.19 +1.5 306,122 + AO353_01420 0.19 +0.7 306,122 + AO353_01420 0.19 -0.1 306,123 - AO353_01420 0.19 +2.2 306,123 - AO353_01420 0.19 -1.4 306,162 + AO353_01420 0.21 -1.1 306,162 + AO353_01420 0.21 +2.2 306,162 + AO353_01420 0.21 +0.5 306,163 - AO353_01420 0.21 +1.2 306,163 - AO353_01420 0.21 +0.9 306,251 + AO353_01420 0.24 +0.6 306,251 + AO353_01420 0.24 +0.7 306,251 + AO353_01420 0.24 +1.5 306,252 - AO353_01420 0.24 -1.1 306,252 - AO353_01420 0.24 +0.5 306,252 - AO353_01420 0.24 +1.9 306,252 - AO353_01420 0.24 +0.4 306,252 - AO353_01420 0.24 -0.5 306,252 - AO353_01420 0.24 -0.1 306,252 - AO353_01420 0.24 +0.5 306,471 - AO353_01420 0.34 -0.1 306,585 + AO353_01420 0.39 +1.0 306,586 - AO353_01420 0.39 +0.4 306,586 - AO353_01420 0.39 +0.9 306,614 + AO353_01420 0.40 -0.1 306,614 + AO353_01420 0.40 -2.7 306,614 + AO353_01420 0.40 +0.9 306,614 + AO353_01420 0.40 -1.1 306,614 + AO353_01420 0.40 +2.5 306,614 + AO353_01420 0.40 +0.9 306,614 + AO353_01420 0.40 -0.1 306,638 + AO353_01420 0.41 +0.1 306,638 + AO353_01420 0.41 -1.1 306,638 + AO353_01420 0.41 -0.4 306,638 + AO353_01420 0.41 +0.3 306,639 - AO353_01420 0.41 +1.2 306,639 - AO353_01420 0.41 +2.5 306,639 - AO353_01420 0.41 +0.9 306,639 - AO353_01420 0.41 +1.1 306,639 - AO353_01420 0.41 -0.7 306,639 - AO353_01420 0.41 +1.9 306,639 - AO353_01420 0.41 +0.9 306,935 + AO353_01420 0.54 -1.1 306,935 + AO353_01420 0.54 +1.2 306,935 + AO353_01420 0.54 -0.1 306,935 + AO353_01420 0.54 +1.9 306,935 + AO353_01420 0.54 -1.1 306,936 - AO353_01420 0.54 -2.7 306,936 - AO353_01420 0.54 -0.8 306,936 - AO353_01420 0.54 +0.9 306,936 - AO353_01420 0.54 +0.9 306,936 - AO353_01420 0.54 +0.9 306,936 - AO353_01420 0.54 +0.1 306,936 - AO353_01420 0.54 +1.9 306,936 - AO353_01420 0.54 +0.3 306,936 - AO353_01420 0.54 +0.7 306,936 - +0.5 306,938 + AO353_01420 0.54 +1.7 306,938 + AO353_01420 0.54 -0.1 306,938 + AO353_01420 0.54 -0.5 306,938 + AO353_01420 0.54 +1.5 306,938 + AO353_01420 0.54 +0.5 306,938 + AO353_01420 0.54 -0.1 306,939 - AO353_01420 0.54 -2.1 306,939 - AO353_01420 0.54 +0.7 306,939 - AO353_01420 0.54 +0.9 306,939 - AO353_01420 0.54 +1.2 307,047 - AO353_01420 0.59 +0.3 307,128 + AO353_01420 0.62 +1.7 307,128 + AO353_01420 0.62 +2.2 307,128 + AO353_01420 0.62 -0.7 307,128 + AO353_01420 0.62 +2.9 307,128 + AO353_01420 0.62 +0.5 307,128 + AO353_01420 0.62 +1.4 307,129 - AO353_01420 0.62 +1.7 307,129 - AO353_01420 0.62 +1.5 307,129 - AO353_01420 0.62 -0.8 307,129 - AO353_01420 0.62 -0.1 307,265 + AO353_01420 0.68 +0.5 307,325 + AO353_01420 0.71 +0.2 307,368 + AO353_01420 0.73 +0.1 307,369 - AO353_01420 0.73 +0.9 307,386 + AO353_01420 0.73 +0.2 307,386 + AO353_01420 0.73 -1.7 307,388 + AO353_01420 0.73 +1.5 307,389 - AO353_01420 0.74 +0.2 307,504 - AO353_01420 0.78 +0.7 307,614 - AO353_01420 0.83 -0.1 307,817 + -0.1 307,817 + +2.0 307,817 + -1.1 307,817 + -0.1 307,817 + +0.5 307,818 - +2.5 307,818 - +0.9 307,818 - -1.0 307,968 + -0.6 307,968 + -1.4 307,969 - -0.1 307,969 - +1.5 307,969 - +0.6 308,059 + AO353_01425 0.13 +0.9 308,059 + AO353_01425 0.13 +0.9 308,059 + AO353_01425 0.13 -0.1 308,059 + AO353_01425 0.13 -1.1 308,059 + AO353_01425 0.13 -2.1 308,060 - AO353_01425 0.13 +1.9 308,078 + AO353_01425 0.17 +0.5 308,078 + AO353_01425 0.17 -1.1 308,078 + AO353_01425 0.17 -0.9 308,078 + AO353_01425 0.17 -0.1 308,078 + AO353_01425 0.17 -0.7 308,078 + AO353_01425 0.17 +1.1 308,078 + AO353_01425 0.17 -0.1 308,079 - AO353_01425 0.17 -0.1 308,079 - AO353_01425 0.17 +1.2 308,079 - AO353_01425 0.17 +0.3 308,079 - AO353_01425 0.17 -0.1 308,079 - AO353_01425 0.17 +0.5 308,322 - AO353_01425 0.69 -1.1 308,462 + +1.5 308,462 + -0.5 308,482 + -0.4 308,482 + -0.1 308,482 + -0.4 308,482 + -0.5 308,483 - +0.9 308,483 - +1.6 308,483 - +2.2 308,483 - -0.5 308,484 + +1.1 308,484 + +1.5 308,484 + +1.1 308,484 + -0.1 308,484 + -0.1 308,484 + -0.7 308,484 + -1.1 308,484 + +0.2 308,484 + -1.1 308,484 + +0.3 308,484 + +1.1 308,484 + +0.4 308,484 + +0.5 308,484 + +0.9 308,484 + +0.7 308,484 + +0.3 308,484 + +0.5 308,484 + +1.9 308,484 + +0.2 308,484 + +0.6 308,484 + -2.1 308,484 + +0.9 308,484 + -0.7 308,484 + -0.1 308,484 + +1.2 308,485 - +1.5 308,485 - +0.4 308,485 - +0.1 308,485 - +0.9 308,485 - +0.3 308,485 - +2.2 308,485 - -1.1 308,485 - -2.1 308,485 - +1.0 308,485 - -0.1 308,485 - -0.1 308,485 - -1.1 308,485 - -0.1 308,485 - -1.1 308,488 + +0.9 308,488 + +0.5 308,488 + -0.1 308,488 + -0.5 308,488 + +0.4 308,488 + +0.5 308,488 + -1.1 308,489 - -0.4 308,489 - -1.1 308,489 - -0.1 308,489 - +0.2 308,489 - -0.4 308,489 - -0.1 308,489 - +1.3 308,489 - -1.1 308,489 - +1.5 308,494 + -0.1 308,494 + -0.1 308,494 + +2.2 308,526 - +0.9 308,526 - -0.8 308,526 - +2.0 308,530 + +0.9 308,530 + +0.4 308,530 + +0.9 308,601 + +1.5 308,602 - -0.1 308,602 - -1.4 308,610 - -0.1 308,610 - +0.9
Or see this region's nucleotide sequence