Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20570 and ABZR86_RS20575 are separated by 144 nucleotides ABZR86_RS20575 and ABZR86_RS20580 are separated by 154 nucleotides
ABZR86_RS20570: ABZR86_RS20570 - acetyl-CoA C-acyltransferase, at 62,600 to 63,784
_RS20570
ABZR86_RS20575: ABZR86_RS20575 - hypothetical protein, at 63,929 to 64,291
_RS20575
ABZR86_RS20580: ABZR86_RS20580 - carboxyl transferase domain-containing protein, at 64,446 to 66,053
_RS20580
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1
2
3 at 63.056 kb on + strand, within ABZR86_RS20570 at 63.104 kb on + strand, within ABZR86_RS20570 at 63.104 kb on + strand, within ABZR86_RS20570 at 63.105 kb on - strand, within ABZR86_RS20570 at 63.105 kb on - strand, within ABZR86_RS20570 at 63.105 kb on - strand, within ABZR86_RS20570 at 63.846 kb on + strand at 63.847 kb on - strand at 63.881 kb on + strand at 63.881 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.888 kb on - strand at 63.888 kb on - strand at 63.888 kb on - strand at 63.948 kb on + strand at 63.949 kb on - strand at 63.949 kb on - strand at 64.290 kb on - strand at 64.689 kb on + strand, within ABZR86_RS20580 at 64.689 kb on + strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.948 kb on - strand, within ABZR86_RS20580 at 64.948 kb on - strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.026 kb on - strand, within ABZR86_RS20580 at 65.076 kb on - strand, within ABZR86_RS20580 at 65.076 kb on - strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.160 kb on - strand, within ABZR86_RS20580 at 65.160 kb on - strand, within ABZR86_RS20580
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 63,056 + ABZR86_RS20570 0.38 +0.0 63,104 + ABZR86_RS20570 0.43 +0.4 63,104 + ABZR86_RS20570 0.43 -0.1 63,105 - ABZR86_RS20570 0.43 +1.2 63,105 - ABZR86_RS20570 0.43 +0.4 63,105 - ABZR86_RS20570 0.43 +0.7 63,846 + -0.5 63,847 - +0.3 63,881 + -0.0 63,881 + +1.1 63,884 + -1.5 63,884 + +0.7 63,884 + +1.1 63,884 + +0.7 63,884 + -0.5 63,888 - -0.5 63,888 - +0.9 63,888 - -1.4 63,948 + -0.6 63,949 - -0.9 63,949 - +0.2 64,290 - +0.3 64,689 + ABZR86_RS20580 0.15 -1.0 64,689 + ABZR86_RS20580 0.15 +0.9 64,690 - ABZR86_RS20580 0.15 -0.8 64,690 - ABZR86_RS20580 0.15 +3.2 64,690 - ABZR86_RS20580 0.15 -0.5 64,795 - ABZR86_RS20580 0.22 +0.0 64,795 - ABZR86_RS20580 0.22 +0.9 64,795 - ABZR86_RS20580 0.22 +0.2 64,866 + ABZR86_RS20580 0.26 -0.1 64,866 + ABZR86_RS20580 0.26 +0.1 64,866 + ABZR86_RS20580 0.26 +0.5 64,947 + ABZR86_RS20580 0.31 -0.1 64,947 + ABZR86_RS20580 0.31 +0.0 64,947 + ABZR86_RS20580 0.31 -0.9 64,948 - ABZR86_RS20580 0.31 -0.2 64,948 - ABZR86_RS20580 0.31 -0.5 65,025 + ABZR86_RS20580 0.36 +0.1 65,025 + ABZR86_RS20580 0.36 -0.6 65,025 + ABZR86_RS20580 0.36 +0.0 65,026 - ABZR86_RS20580 0.36 +0.1 65,076 - ABZR86_RS20580 0.39 +0.1 65,076 - ABZR86_RS20580 0.39 -0.6 65,159 + ABZR86_RS20580 0.44 +0.9 65,159 + ABZR86_RS20580 0.44 +2.4 65,159 + ABZR86_RS20580 0.44 +0.3 65,159 + ABZR86_RS20580 0.44 -0.8 65,160 - ABZR86_RS20580 0.44 +0.1 65,160 - ABZR86_RS20580 0.44 +0.0
Or see this region's nucleotide sequence