Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18870 and ABZR86_RS18875 are separated by 143 nucleotides ABZR86_RS18875 and ABZR86_RS18880 are separated by 87 nucleotides
ABZR86_RS18870: ABZR86_RS18870 - adenylyl-sulfate kinase, at 203,669 to 205,531
_RS18870
ABZR86_RS18875: ABZR86_RS18875 - glycine cleavage system aminomethyltransferase GcvT, at 205,675 to 206,775
_RS18875
ABZR86_RS18880: ABZR86_RS18880 - glycine cleavage system protein GcvH, at 206,863 to 207,258
_RS18880
Position (kb) 205
206
207 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 204.677 kb on + strand, within ABZR86_RS18870 at 204.677 kb on + strand, within ABZR86_RS18870 at 204.677 kb on + strand, within ABZR86_RS18870 at 204.678 kb on - strand, within ABZR86_RS18870 at 204.839 kb on + strand, within ABZR86_RS18870 at 204.840 kb on - strand, within ABZR86_RS18870 at 205.100 kb on + strand, within ABZR86_RS18870 at 205.100 kb on + strand, within ABZR86_RS18870 at 205.100 kb on + strand, within ABZR86_RS18870 at 205.101 kb on - strand, within ABZR86_RS18870 at 205.101 kb on - strand, within ABZR86_RS18870 at 205.101 kb on - strand, within ABZR86_RS18870 at 205.364 kb on + strand at 205.364 kb on + strand at 205.365 kb on - strand at 205.365 kb on - strand at 205.419 kb on - strand at 205.499 kb on + strand at 205.499 kb on + strand at 205.500 kb on - strand at 205.556 kb on + strand at 205.557 kb on - strand at 205.557 kb on - strand at 205.557 kb on - strand at 205.692 kb on - strand at 205.927 kb on + strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.979 kb on - strand, within ABZR86_RS18875 at 205.979 kb on - strand, within ABZR86_RS18875 at 206.254 kb on + strand, within ABZR86_RS18875 at 206.255 kb on - strand, within ABZR86_RS18875 at 206.735 kb on - strand at 206.806 kb on + strand at 206.806 kb on + strand at 206.806 kb on + strand at 206.807 kb on - strand at 206.807 kb on - strand at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.987 kb on - strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.559 kb on - strand at 207.613 kb on - strand at 207.752 kb on + strand at 207.768 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 204,677 + ABZR86_RS18870 0.54 +0.8 204,677 + ABZR86_RS18870 0.54 +0.0 204,677 + ABZR86_RS18870 0.54 -0.4 204,678 - ABZR86_RS18870 0.54 +0.2 204,839 + ABZR86_RS18870 0.63 +0.3 204,840 - ABZR86_RS18870 0.63 +0.3 205,100 + ABZR86_RS18870 0.77 -1.0 205,100 + ABZR86_RS18870 0.77 -0.7 205,100 + ABZR86_RS18870 0.77 -0.2 205,101 - ABZR86_RS18870 0.77 -0.1 205,101 - ABZR86_RS18870 0.77 -0.4 205,101 - ABZR86_RS18870 0.77 -0.6 205,364 + -0.7 205,364 + +0.3 205,365 - -0.5 205,365 - +0.5 205,419 - -0.3 205,499 + +0.8 205,499 + -0.1 205,500 - +0.1 205,556 + -0.3 205,557 - +0.2 205,557 - -0.9 205,557 - +0.4 205,692 - +1.4 205,927 + ABZR86_RS18875 0.23 -2.1 205,928 - ABZR86_RS18875 0.23 -1.2 205,928 - ABZR86_RS18875 0.23 -1.4 205,928 - ABZR86_RS18875 0.23 -4.2 205,979 - ABZR86_RS18875 0.28 -0.9 205,979 - ABZR86_RS18875 0.28 -1.8 206,254 + ABZR86_RS18875 0.53 -0.8 206,255 - ABZR86_RS18875 0.53 -0.7 206,735 - +0.6 206,806 + -0.9 206,806 + -0.1 206,806 + -0.1 206,807 - +1.1 206,807 - -0.4 206,986 + ABZR86_RS18880 0.31 -2.7 206,986 + ABZR86_RS18880 0.31 +0.6 206,986 + ABZR86_RS18880 0.31 -0.6 206,986 + ABZR86_RS18880 0.31 -1.6 206,986 + ABZR86_RS18880 0.31 -1.3 206,986 + ABZR86_RS18880 0.31 -2.7 206,986 + ABZR86_RS18880 0.31 -1.4 206,986 + ABZR86_RS18880 0.31 -3.0 206,986 + ABZR86_RS18880 0.31 -1.3 206,986 + ABZR86_RS18880 0.31 +0.5 206,986 + ABZR86_RS18880 0.31 -1.3 206,986 + ABZR86_RS18880 0.31 -2.3 206,986 + ABZR86_RS18880 0.31 -2.1 206,986 + ABZR86_RS18880 0.31 -2.7 206,987 - ABZR86_RS18880 0.31 -1.0 207,073 + ABZR86_RS18880 0.53 -1.6 207,073 + ABZR86_RS18880 0.53 -0.9 207,074 - ABZR86_RS18880 0.53 -1.6 207,074 - ABZR86_RS18880 0.53 -0.4 207,074 - ABZR86_RS18880 0.53 -1.4 207,074 - ABZR86_RS18880 0.53 -1.5 207,074 - ABZR86_RS18880 0.53 -1.0 207,559 - -0.1 207,613 - -0.8 207,752 + -0.8 207,768 + -0.6
Or see this region's nucleotide sequence