Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10755 and ABZR86_RS10760 are separated by 289 nucleotides ABZR86_RS10760 and ABZR86_RS10765 are separated by 15 nucleotides ABZR86_RS10765 and ABZR86_RS10770 are separated by 244 nucleotides
ABZR86_RS10755: ABZR86_RS10755 - oligopeptide transporter, OPT family, at 2,391,569 to 2,393,554
_RS10755
ABZR86_RS10760: ABZR86_RS10760 - nuclear transport factor 2 family protein, at 2,393,844 to 2,394,305
_RS10760
ABZR86_RS10765: ABZR86_RS10765 - hypothetical protein, at 2,394,321 to 2,394,785
_RS10765
ABZR86_RS10770: ABZR86_RS10770 - transcriptional regulator, at 2,395,030 to 2,395,353
_RS10770
Position (kb)
2393
2394
2395 Strain fitness (log2 ratio)
-2
-1
0
1 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.194 kb on - strand, within ABZR86_RS10755 at 2393.194 kb on - strand, within ABZR86_RS10755 at 2393.504 kb on + strand at 2393.505 kb on - strand at 2393.505 kb on - strand at 2393.595 kb on + strand at 2393.595 kb on + strand at 2393.595 kb on + strand at 2393.659 kb on - strand at 2393.812 kb on + strand at 2393.813 kb on - strand at 2394.051 kb on + strand, within ABZR86_RS10760 at 2394.052 kb on - strand, within ABZR86_RS10760 at 2394.052 kb on - strand, within ABZR86_RS10760 at 2394.102 kb on + strand, within ABZR86_RS10760 at 2394.102 kb on + strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.285 kb on + strand at 2394.285 kb on + strand at 2394.285 kb on + strand at 2394.286 kb on - strand at 2394.286 kb on - strand at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.704 kb on - strand, within ABZR86_RS10765 at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.926 kb on - strand at 2394.983 kb on + strand at 2394.984 kb on - strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.005 kb on - strand at 2395.005 kb on - strand at 2395.241 kb on - strand, within ABZR86_RS10770 at 2395.271 kb on + strand, within ABZR86_RS10770
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,392,968 + ABZR86_RS10755 0.70 -0.6 2,392,968 + ABZR86_RS10755 0.70 +0.1 2,392,968 + ABZR86_RS10755 0.70 +1.0 2,393,193 + ABZR86_RS10755 0.82 -0.8 2,393,193 + ABZR86_RS10755 0.82 -0.0 2,393,193 + ABZR86_RS10755 0.82 +0.6 2,393,193 + ABZR86_RS10755 0.82 -0.1 2,393,193 + ABZR86_RS10755 0.82 -1.1 2,393,194 - ABZR86_RS10755 0.82 -0.6 2,393,194 - ABZR86_RS10755 0.82 +0.5 2,393,504 + +0.0 2,393,505 - -0.7 2,393,505 - +0.2 2,393,595 + +0.4 2,393,595 + +0.1 2,393,595 + +0.5 2,393,659 - +0.0 2,393,812 + -0.6 2,393,813 - -0.4 2,394,051 + ABZR86_RS10760 0.45 +0.0 2,394,052 - ABZR86_RS10760 0.45 +0.4 2,394,052 - ABZR86_RS10760 0.45 -0.3 2,394,102 + ABZR86_RS10760 0.56 -0.1 2,394,102 + ABZR86_RS10760 0.56 +1.3 2,394,103 - ABZR86_RS10760 0.56 +0.0 2,394,103 - ABZR86_RS10760 0.56 +0.4 2,394,103 - ABZR86_RS10760 0.56 +0.2 2,394,285 + -0.6 2,394,285 + +0.3 2,394,285 + -2.7 2,394,286 - +0.7 2,394,286 - -0.1 2,394,406 + ABZR86_RS10765 0.18 +0.7 2,394,406 + ABZR86_RS10765 0.18 -0.3 2,394,406 + ABZR86_RS10765 0.18 +0.1 2,394,406 + ABZR86_RS10765 0.18 +1.3 2,394,406 + ABZR86_RS10765 0.18 +1.0 2,394,656 + ABZR86_RS10765 0.72 +0.2 2,394,656 + ABZR86_RS10765 0.72 -0.1 2,394,656 + ABZR86_RS10765 0.72 -0.1 2,394,656 + ABZR86_RS10765 0.72 +0.2 2,394,656 + ABZR86_RS10765 0.72 -1.8 2,394,656 + ABZR86_RS10765 0.72 -0.6 2,394,656 + ABZR86_RS10765 0.72 -0.3 2,394,657 - ABZR86_RS10765 0.72 +1.0 2,394,657 - ABZR86_RS10765 0.72 -0.6 2,394,657 - ABZR86_RS10765 0.72 +0.6 2,394,703 + ABZR86_RS10765 0.82 -0.2 2,394,703 + ABZR86_RS10765 0.82 -0.1 2,394,704 - ABZR86_RS10765 0.82 +0.5 2,394,925 + -0.2 2,394,925 + -0.1 2,394,925 + -0.7 2,394,925 + -1.4 2,394,926 - +0.2 2,394,983 + +0.9 2,394,984 - -0.4 2,395,004 + -0.2 2,395,004 + -0.0 2,395,004 + +0.3 2,395,004 + +0.2 2,395,004 + +1.0 2,395,004 + +0.3 2,395,004 + +0.0 2,395,005 - +0.5 2,395,005 - +0.1 2,395,241 - ABZR86_RS10770 0.65 -0.0 2,395,271 + ABZR86_RS10770 0.74 +1.1
Or see this region's nucleotide sequence