Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08765 and ABZR86_RS08770 are separated by 102 nucleotides ABZR86_RS08770 and ABZR86_RS08775 overlap by 4 nucleotides ABZR86_RS08775 and ABZR86_RS08780 overlap by 4 nucleotides
ABZR86_RS08765: ABZR86_RS08765 - GTP cyclohydrolase FolE2, at 1,961,864 to 1,962,817
_RS08765
ABZR86_RS08770: ABZR86_RS08770 - squalene/phytoene synthase family protein, at 1,962,920 to 1,963,771
_RS08770
ABZR86_RS08775: ABZR86_RS08775 - HAD-IA family hydrolase, at 1,963,768 to 1,964,448
_RS08775
ABZR86_RS08780: ABZR86_RS08780 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 1,964,445 to 1,965,152
_RS08780
Position (kb)
1962
1963
1964 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1962.273 kb on - strand, within ABZR86_RS08765 at 1962.348 kb on + strand, within ABZR86_RS08765 at 1962.349 kb on - strand, within ABZR86_RS08765 at 1962.366 kb on + strand, within ABZR86_RS08765 at 1962.367 kb on - strand, within ABZR86_RS08765 at 1962.389 kb on + strand, within ABZR86_RS08765 at 1962.389 kb on + strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.390 kb on - strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.597 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.610 kb on + strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.611 kb on - strand, within ABZR86_RS08765 at 1962.811 kb on + strand at 1962.812 kb on - strand at 1962.812 kb on - strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.813 kb on + strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.814 kb on - strand at 1962.866 kb on - strand at 1962.894 kb on + strand at 1962.894 kb on + strand at 1962.895 kb on - strand at 1962.895 kb on - strand at 1963.735 kb on - strand at 1963.893 kb on - strand, within ABZR86_RS08775 at 1964.205 kb on - strand, within ABZR86_RS08775 at 1964.205 kb on - strand, within ABZR86_RS08775 at 1964.217 kb on - strand, within ABZR86_RS08775
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,962,273 - ABZR86_RS08765 0.43 +0.2 1,962,348 + ABZR86_RS08765 0.51 -0.7 1,962,349 - ABZR86_RS08765 0.51 -1.1 1,962,366 + ABZR86_RS08765 0.53 -0.2 1,962,367 - ABZR86_RS08765 0.53 -0.3 1,962,389 + ABZR86_RS08765 0.55 -0.8 1,962,389 + ABZR86_RS08765 0.55 +0.6 1,962,390 - ABZR86_RS08765 0.55 -1.1 1,962,390 - ABZR86_RS08765 0.55 -1.8 1,962,390 - ABZR86_RS08765 0.55 +0.1 1,962,597 + ABZR86_RS08765 0.77 -0.2 1,962,597 + ABZR86_RS08765 0.77 -1.4 1,962,597 + ABZR86_RS08765 0.77 -0.9 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 +0.2 1,962,610 + ABZR86_RS08765 0.78 -0.8 1,962,610 + ABZR86_RS08765 0.78 +0.2 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 -0.8 1,962,610 + ABZR86_RS08765 0.78 -0.4 1,962,610 + ABZR86_RS08765 0.78 -0.7 1,962,610 + ABZR86_RS08765 0.78 -0.2 1,962,610 + ABZR86_RS08765 0.78 -1.7 1,962,610 + ABZR86_RS08765 0.78 -0.8 1,962,610 + ABZR86_RS08765 0.78 -0.8 1,962,610 + ABZR86_RS08765 0.78 -0.9 1,962,611 - ABZR86_RS08765 0.78 -0.7 1,962,611 - ABZR86_RS08765 0.78 -0.1 1,962,611 - ABZR86_RS08765 0.78 +1.9 1,962,611 - ABZR86_RS08765 0.78 +0.4 1,962,611 - ABZR86_RS08765 0.78 -0.4 1,962,611 - ABZR86_RS08765 0.78 +0.8 1,962,611 - ABZR86_RS08765 0.78 -0.2 1,962,611 - ABZR86_RS08765 0.78 -1.1 1,962,611 - ABZR86_RS08765 0.78 -0.8 1,962,611 - ABZR86_RS08765 0.78 -0.3 1,962,611 - ABZR86_RS08765 0.78 -0.4 1,962,811 + -1.0 1,962,812 - +0.1 1,962,812 - -0.9 1,962,813 + -1.5 1,962,813 + -0.7 1,962,813 + -1.3 1,962,813 + -0.7 1,962,813 + -1.4 1,962,813 + -0.3 1,962,813 + +0.6 1,962,813 + -0.3 1,962,813 + +0.2 1,962,813 + +0.4 1,962,813 + -0.3 1,962,813 + -1.2 1,962,814 - -0.7 1,962,814 - +0.3 1,962,814 - -0.1 1,962,814 - -0.3 1,962,814 - -0.4 1,962,814 - -0.1 1,962,814 - -1.7 1,962,814 - -0.1 1,962,814 - -0.7 1,962,814 - -0.0 1,962,814 - -0.9 1,962,814 - +0.6 1,962,866 - -0.5 1,962,894 + +0.1 1,962,894 + +2.5 1,962,895 - -0.2 1,962,895 - -0.3 1,963,735 - -0.8 1,963,893 - ABZR86_RS08775 0.18 +1.2 1,964,205 - ABZR86_RS08775 0.64 -0.9 1,964,205 - ABZR86_RS08775 0.64 +0.3 1,964,217 - ABZR86_RS08775 0.66 +0.5
Or see this region's nucleotide sequence