Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2535
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,199,701 | + | +0.1 | |||
3,199,755 | - | -0.7 | |||
3,199,878 | + | DvMF_2534 | 0.22 | -0.2 | |
3,199,900 | + | DvMF_2534 | 0.25 | -0.4 | |
3,199,952 | + | DvMF_2534 | 0.32 | +0.1 | |
3,199,960 | - | DvMF_2534 | 0.33 | -0.4 | |
3,200,340 | - | DvMF_2534 | 0.83 | -1.1 | |
3,200,461 | + | -1.1 | |||
3,200,461 | + | -0.3 | |||
3,200,461 | + | +0.1 | |||
3,200,469 | - | -1.4 | |||
3,200,469 | - | -0.7 | |||
3,200,498 | - | -1.6 | |||
3,200,577 | + | -0.9 | |||
3,200,818 | + | DvMF_2535 | 0.35 | -0.8 | |
3,200,818 | + | DvMF_2535 | 0.35 | -0.4 | |
3,200,826 | - | DvMF_2535 | 0.36 | -0.5 | |
3,201,142 | - | DvMF_2535 | 0.83 | -1.2 | |
3,201,215 | + | -1.1 | |||
3,201,223 | - | -0.4 | |||
3,201,339 | + | -0.6 | |||
3,201,722 | - | DvMF_2536 | 0.30 | -0.4 | |
3,202,132 | - | DvMF_2536 | 0.59 | -0.4 | |
3,202,134 | + | DvMF_2536 | 0.59 | -0.4 | |
3,202,142 | - | DvMF_2536 | 0.60 | -0.6 | |
3,202,142 | - | DvMF_2536 | 0.60 | -0.6 |
Or see this region's nucleotide sequence