Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2530 and DvMF_2531 are separated by 3 nucleotides DvMF_2531 and DvMF_2532 are separated by 58 nucleotides
DvMF_2530: DvMF_2530 - hypothetical protein (RefSeq), at 3,191,904 to 3,193,049
_2530
DvMF_2531: DvMF_2531 - cytochrome bd-type quinol oxidase subunit 1-like protein (RefSeq), at 3,193,053 to 3,194,360
_2531
DvMF_2532: DvMF_2532 - cytochrome c class III (RefSeq), at 3,194,419 to 3,196,350
_2532
Position (kb)
3193
3194
3195 Strain fitness (log2 ratio)
-1
0
1 at 3192.178 kb on + strand, within DvMF_2530 at 3192.300 kb on - strand, within DvMF_2530 at 3192.574 kb on + strand, within DvMF_2530 at 3192.721 kb on + strand, within DvMF_2530 at 3192.776 kb on - strand, within DvMF_2530 at 3192.776 kb on - strand, within DvMF_2530 at 3192.776 kb on - strand, within DvMF_2530 at 3192.955 kb on + strand at 3193.043 kb on + strand at 3193.044 kb on + strand at 3193.058 kb on + strand at 3193.312 kb on - strand, within DvMF_2531 at 3193.492 kb on - strand, within DvMF_2531 at 3193.533 kb on - strand, within DvMF_2531 at 3193.801 kb on - strand, within DvMF_2531 at 3193.803 kb on - strand, within DvMF_2531 at 3193.828 kb on - strand, within DvMF_2531 at 3193.841 kb on - strand, within DvMF_2531 at 3193.915 kb on - strand, within DvMF_2531 at 3193.955 kb on + strand, within DvMF_2531 at 3194.238 kb on - strand at 3194.564 kb on - strand at 3194.815 kb on + strand, within DvMF_2532 at 3194.815 kb on + strand, within DvMF_2532 at 3194.815 kb on + strand, within DvMF_2532 at 3194.823 kb on - strand, within DvMF_2532 at 3194.949 kb on + strand, within DvMF_2532 at 3195.079 kb on - strand, within DvMF_2532 at 3195.080 kb on - strand, within DvMF_2532 at 3195.156 kb on - strand, within DvMF_2532 at 3195.261 kb on - strand, within DvMF_2532 at 3195.277 kb on + strand, within DvMF_2532 at 3195.307 kb on + strand, within DvMF_2532
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 3,192,178 + DvMF_2530 0.24 -0.2 3,192,300 - DvMF_2530 0.35 -0.2 3,192,574 + DvMF_2530 0.58 +0.3 3,192,721 + DvMF_2530 0.71 -0.2 3,192,776 - DvMF_2530 0.76 +1.2 3,192,776 - DvMF_2530 0.76 -0.2 3,192,776 - DvMF_2530 0.76 +0.1 3,192,955 + -0.3 3,193,043 + -1.7 3,193,044 + -0.2 3,193,058 + -0.2 3,193,312 - DvMF_2531 0.20 -0.2 3,193,492 - DvMF_2531 0.34 +0.5 3,193,533 - DvMF_2531 0.37 -0.1 3,193,801 - DvMF_2531 0.57 -0.2 3,193,803 - DvMF_2531 0.57 +0.0 3,193,828 - DvMF_2531 0.59 +0.1 3,193,841 - DvMF_2531 0.60 +1.0 3,193,915 - DvMF_2531 0.66 -0.9 3,193,955 + DvMF_2531 0.69 -0.0 3,194,238 - -0.4 3,194,564 - +0.3 3,194,815 + DvMF_2532 0.20 -0.7 3,194,815 + DvMF_2532 0.20 -0.4 3,194,815 + DvMF_2532 0.20 -0.4 3,194,823 - DvMF_2532 0.21 -0.5 3,194,949 + DvMF_2532 0.27 -0.3 3,195,079 - DvMF_2532 0.34 +0.1 3,195,080 - DvMF_2532 0.34 -0.3 3,195,156 - DvMF_2532 0.38 +0.6 3,195,261 - DvMF_2532 0.44 -0.4 3,195,277 + DvMF_2532 0.44 -0.3 3,195,307 + DvMF_2532 0.46 -0.3
Or see this region's nucleotide sequence