Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0351
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 408,555 | - | DvMF_0350 | 0.38 | -0.2 | |
| 408,670 | + | DvMF_0350 | 0.50 | -0.8 | |
| 408,795 | + | DvMF_0350 | 0.63 | +0.1 | |
| 408,837 | - | DvMF_0350 | 0.67 | -0.1 | |
| 408,913 | + | DvMF_0350 | 0.75 | -0.4 | |
| 408,924 | + | DvMF_0350 | 0.76 | +0.2 | |
| 408,934 | + | DvMF_0350 | 0.77 | +0.2 | |
| 409,141 | - | -0.2 | |||
| 409,181 | + | +0.7 | |||
| 409,244 | + | +0.2 | |||
| 409,244 | + | -0.1 | |||
| 409,303 | + | -0.6 | |||
| 409,321 | - | -0.4 | |||
| 409,486 | - | DvMF_0351 | 0.16 | -0.3 | |
| 409,500 | + | DvMF_0351 | 0.24 | -1.2 | |
| 409,575 | - | DvMF_0351 | 0.70 | -0.2 | |
| 409,577 | + | DvMF_0351 | 0.71 | -0.2 | |
| 409,577 | + | DvMF_0351 | 0.71 | -0.3 | |
| 409,584 | + | DvMF_0351 | 0.75 | -0.1 | |
| 410,550 | - | -0.2 |
Or see this region's nucleotide sequence