Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2523 and Pf6N2E2_2524 are separated by 136 nucleotides Pf6N2E2_2524 and Pf6N2E2_2525 are separated by 61 nucleotides Pf6N2E2_2525 and Pf6N2E2_2526 are separated by 4 nucleotides
Pf6N2E2_2523 - Methylthioribose-1-phosphate isomerase (EC 5.3.1.23), at 2,979,842 to 2,980,888
_2523
Pf6N2E2_2524 - S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase, at 2,981,025 to 2,982,356
_2524
Pf6N2E2_2525 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 2,982,418 to 2,983,116
_2525
Pf6N2E2_2526 - Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase, at 2,983,121 to 2,983,792
_2526
Position (kb)
2981
2982
2983 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.141 kb on + strand, within Pf6N2E2_2523 at 2980.142 kb on - strand, within Pf6N2E2_2523 at 2980.332 kb on + strand, within Pf6N2E2_2523 at 2980.333 kb on - strand, within Pf6N2E2_2523 at 2980.358 kb on - strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.854 kb on + strand at 2980.855 kb on - strand at 2980.855 kb on - strand at 2980.954 kb on + strand at 2980.955 kb on - strand at 2980.955 kb on - strand at 2980.956 kb on + strand at 2980.957 kb on - strand at 2980.957 kb on - strand at 2980.984 kb on + strand at 2980.986 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.003 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.056 kb on + strand at 2981.056 kb on + strand at 2981.098 kb on + strand at 2981.098 kb on + strand at 2981.353 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.427 kb on + strand, within Pf6N2E2_2524 at 2981.615 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524 at 2982.186 kb on + strand, within Pf6N2E2_2524 at 2982.186 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.232 kb on + strand at 2982.354 kb on + strand at 2983.114 kb on + strand at 2983.114 kb on + strand at 2983.115 kb on - strand at 2983.115 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,980,137 + Pf6N2E2_2523 0.28 +0.8 2,980,137 + Pf6N2E2_2523 0.28 -0.1 2,980,137 + Pf6N2E2_2523 0.28 +1.5 2,980,137 + Pf6N2E2_2523 0.28 +0.7 2,980,137 + Pf6N2E2_2523 0.28 -0.0 2,980,137 + Pf6N2E2_2523 0.28 +0.2 2,980,137 + Pf6N2E2_2523 0.28 +0.6 2,980,137 + Pf6N2E2_2523 0.28 -0.6 2,980,137 + Pf6N2E2_2523 0.28 -1.1 2,980,137 + Pf6N2E2_2523 0.28 -2.1 2,980,138 - Pf6N2E2_2523 0.28 +0.7 2,980,138 - Pf6N2E2_2523 0.28 -2.0 2,980,138 - Pf6N2E2_2523 0.28 +1.2 2,980,138 - Pf6N2E2_2523 0.28 -0.9 2,980,138 - Pf6N2E2_2523 0.28 +0.8 2,980,141 + Pf6N2E2_2523 0.29 -0.2 2,980,142 - Pf6N2E2_2523 0.29 +0.2 2,980,332 + Pf6N2E2_2523 0.47 +1.7 2,980,333 - Pf6N2E2_2523 0.47 +0.4 2,980,358 - Pf6N2E2_2523 0.49 +0.5 2,980,359 + Pf6N2E2_2523 0.49 -0.4 2,980,359 + Pf6N2E2_2523 0.49 +0.2 2,980,359 + Pf6N2E2_2523 0.49 -0.4 2,980,359 + Pf6N2E2_2523 0.49 +0.6 2,980,360 - Pf6N2E2_2523 0.49 +0.4 2,980,360 - Pf6N2E2_2523 0.49 -0.2 2,980,360 - Pf6N2E2_2523 0.49 +0.4 2,980,360 - Pf6N2E2_2523 0.49 +1.6 2,980,360 - Pf6N2E2_2523 0.49 -0.4 2,980,360 - Pf6N2E2_2523 0.49 -1.0 2,980,360 - Pf6N2E2_2523 0.49 +0.1 2,980,725 + Pf6N2E2_2523 0.84 +0.2 2,980,725 + Pf6N2E2_2523 0.84 +0.1 2,980,726 - Pf6N2E2_2523 0.84 +0.4 2,980,726 - Pf6N2E2_2523 0.84 -1.2 2,980,726 - Pf6N2E2_2523 0.84 +1.3 2,980,726 - Pf6N2E2_2523 0.84 -1.0 2,980,726 - Pf6N2E2_2523 0.84 +0.0 2,980,726 - Pf6N2E2_2523 0.84 +0.1 2,980,854 + +0.8 2,980,855 - -0.9 2,980,855 - -0.2 2,980,954 + +0.7 2,980,955 - -0.7 2,980,955 - +0.3 2,980,956 + -0.3 2,980,957 - -1.5 2,980,957 - +0.9 2,980,984 + -0.3 2,980,986 + -1.3 2,981,001 + -0.6 2,981,001 + +1.6 2,981,001 + +1.1 2,981,003 + +1.2 2,981,053 + +1.3 2,981,053 + +0.8 2,981,053 + -0.6 2,981,053 + -0.6 2,981,053 + -0.0 2,981,053 + -1.7 2,981,056 + -1.4 2,981,056 + +0.5 2,981,098 + +0.8 2,981,098 + +1.0 2,981,353 + Pf6N2E2_2524 0.25 +0.5 2,981,421 + Pf6N2E2_2524 0.30 +0.8 2,981,421 + Pf6N2E2_2524 0.30 +1.7 2,981,421 + Pf6N2E2_2524 0.30 -0.3 2,981,421 + Pf6N2E2_2524 0.30 +1.9 2,981,421 + Pf6N2E2_2524 0.30 +0.9 2,981,421 + Pf6N2E2_2524 0.30 -0.3 2,981,421 + Pf6N2E2_2524 0.30 +0.3 2,981,421 + Pf6N2E2_2524 0.30 +1.6 2,981,421 + Pf6N2E2_2524 0.30 +0.7 2,981,421 + Pf6N2E2_2524 0.30 +0.1 2,981,421 + Pf6N2E2_2524 0.30 +0.9 2,981,421 + Pf6N2E2_2524 0.30 +0.4 2,981,427 + Pf6N2E2_2524 0.30 -0.8 2,981,615 + Pf6N2E2_2524 0.44 -0.1 2,981,681 + Pf6N2E2_2524 0.49 +1.2 2,981,681 + Pf6N2E2_2524 0.49 +1.2 2,981,681 + Pf6N2E2_2524 0.49 +1.1 2,981,682 - Pf6N2E2_2524 0.49 +2.0 2,981,682 - Pf6N2E2_2524 0.49 +2.6 2,982,186 + Pf6N2E2_2524 0.87 +2.1 2,982,186 + Pf6N2E2_2524 0.87 +1.5 2,982,210 + Pf6N2E2_2524 0.89 +1.6 2,982,210 + Pf6N2E2_2524 0.89 +1.6 2,982,210 + Pf6N2E2_2524 0.89 +2.2 2,982,210 + Pf6N2E2_2524 0.89 +2.5 2,982,210 + Pf6N2E2_2524 0.89 +0.7 2,982,210 + Pf6N2E2_2524 0.89 +2.2 2,982,210 + Pf6N2E2_2524 0.89 +2.3 2,982,210 + Pf6N2E2_2524 0.89 +1.1 2,982,210 + Pf6N2E2_2524 0.89 +1.0 2,982,210 + Pf6N2E2_2524 0.89 +1.6 2,982,232 + +2.1 2,982,354 + +2.3 2,983,114 + -0.0 2,983,114 + -1.4 2,983,115 - +2.9 2,983,115 - +0.9
Or see this region's nucleotide sequence