Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1001

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
1,169,340	+		Pf6N2E2_1000	0.50	+1.2
1,169,340	+		Pf6N2E2_1000	0.50	-1.6
1,169,341	-		Pf6N2E2_1000	0.51	+1.1
1,169,341	-		Pf6N2E2_1000	0.51	+0.8
1,169,341	-		Pf6N2E2_1000	0.51	-2.7
1,169,341	-		Pf6N2E2_1000	0.51	-0.9
1,169,346	+		Pf6N2E2_1000	0.52	+0.1
1,169,346	+		Pf6N2E2_1000	0.52	+1.2
1,169,346	+		Pf6N2E2_1000	0.52	+0.6
1,169,347	-		Pf6N2E2_1000	0.52	+1.7
1,169,347	-		Pf6N2E2_1000	0.52	+0.8
1,169,347	-		Pf6N2E2_1000	0.52	-0.7
1,169,347	-		Pf6N2E2_1000	0.52	-0.2
1,169,373	+		Pf6N2E2_1000	0.59	+0.7
1,169,373	+		Pf6N2E2_1000	0.59	+0.5
1,169,374	-		Pf6N2E2_1000	0.59	-0.3
1,169,374	-		Pf6N2E2_1000	0.59	-1.1
1,169,374	-		Pf6N2E2_1000	0.59	+0.2
1,169,434	-		Pf6N2E2_1000	0.75	+1.1
1,169,451	+		Pf6N2E2_1000	0.79	+0.1
1,169,451	+		Pf6N2E2_1000	0.79	-0.5
1,169,476	-		Pf6N2E2_1000	0.86	+0.7
1,169,534	-				+0.5
1,169,562	+				+2.1
1,169,563	-				-0.8
1,169,563	-				+1.5
1,169,563	-				+0.5
1,169,563	-				+1.3
1,169,563	-				-1.9
1,169,563	-				-1.6
1,169,563	-				-1.7
1,169,563	-				+0.1
1,169,563	-				+0.1
1,169,563	-				+1.1
1,169,563	-				-1.7
1,169,563	-				+0.1
1,169,563	-				+1.8
1,169,611	-				+0.6
1,169,611	-				-0.7
1,169,645	-				-0.1
1,169,683	-				+0.6
1,169,738	+				+11.7
1,169,808	+				+12.6
1,169,808	+				+11.9
1,169,808	+				+11.1
1,169,808	+				+12.0
1,169,808	+				+12.4
1,169,808	+				+9.8
1,169,808	+				+12.1
1,169,808	+				+11.3
1,169,809	-				+0.8
1,169,809	-				+0.3
1,169,809	-				-0.5
1,169,809	-				+0.6
1,169,857	-				+1.4
1,169,882	-				+0.1
1,169,938	+				+0.7
1,169,938	+				-0.7
1,169,938	+				-0.4
1,169,938	+				+2.3
1,169,938	+				-0.5
1,169,938	+				+0.8
1,169,938	+				+1.4
1,169,939	-				-1.4
1,169,939	-				+1.1
1,169,939	-				-0.4
1,169,939	-				+0.5
1,169,939	-				-0.4
1,169,939	-				-0.2
1,169,939	-				+1.3
1,169,939	-				-0.8
1,169,939	-				-0.4
1,169,939	-				-0.2
1,169,939	-				+1.2
1,169,939	-				+0.4
1,169,942	+				-2.1
1,169,942	+				-1.0
1,169,942	+				-0.2
1,169,943	-				+0.2
1,169,943	-				-1.7
1,169,943	-				+1.0
1,169,943	-				-0.2
1,169,943	-				+0.9
1,169,943	-				+2.1
1,169,943	-				-0.9
1,169,943	-				-0.8
1,169,943	-				+0.1
1,169,943	-				-2.2
1,169,943	-				-0.7
1,169,943	-				+1.4
1,169,943	-				-1.1
1,169,943	-				+1.6
1,169,943	-				+2.5
1,169,946	+				+1.1
1,169,947	-				-2.0
1,169,947	-				+0.4
1,169,947	-				+0.4
1,169,947	-				+0.6
1,169,947	-				-0.4
1,169,947	-				-0.9
1,169,947	-				+0.9
1,170,015	-				-0.3
1,170,045	-				+0.1
1,170,070	+				+11.7
1,170,077	+				+11.1
1,170,098	+				+12.0
1,170,098	+				+12.2
1,170,098	+				+12.0
1,170,099	-				+1.3
1,170,099	-				+0.9
1,170,205	-				-1.2
1,170,224	+				+11.2
1,170,225	-				-1.4
1,170,227	+				+11.4
1,170,228	-				+0.4
1,170,228	-				+1.1
1,170,228	-				+1.6
1,170,245	+				+11.9
1,170,245	+				+12.5
1,170,246	-				-0.1
1,170,291	+				+6.8
1,170,292	-				+0.9
1,170,330	-				-0.4
1,170,330	-				-0.1
1,170,353	+				+7.7
1,170,402	+		Pf6N2E2_1001	0.12	+9.4
1,170,403	-		Pf6N2E2_1001	0.13	+0.1
1,170,425	+		Pf6N2E2_1001	0.15	+8.3
1,170,587	-		Pf6N2E2_1001	0.34	-1.3
1,170,587	-		Pf6N2E2_1001	0.34	+0.8
1,170,657	+		Pf6N2E2_1001	0.42	+11.7
1,170,658	-		Pf6N2E2_1001	0.42	+0.9
1,170,676	+		Pf6N2E2_1001	0.44	+2.9
1,170,728	+		Pf6N2E2_1001	0.51	+12.3
1,170,728	+		Pf6N2E2_1001	0.51	+11.5
1,170,729	-		Pf6N2E2_1001	0.51	+0.5
1,170,763	+		Pf6N2E2_1001	0.55	+11.3
1,170,776	-		Pf6N2E2_1001	0.56	+0.8
1,170,776	-		Pf6N2E2_1001	0.56	+0.7
1,170,934	+		Pf6N2E2_1001	0.75	+11.8
1,170,935	-		Pf6N2E2_1001	0.75	-0.2
1,170,935	-		Pf6N2E2_1001	0.75	-0.3
1,170,938	+				+12.9
1,171,018	+		Pf6N2E2_1001	0.84	+12.7
1,171,018	+		Pf6N2E2_1001	0.84	+12.5
1,171,021	+		Pf6N2E2_1001	0.85	+11.5
1,171,021	+		Pf6N2E2_1001	0.85	+12.4
1,171,021	+		Pf6N2E2_1001	0.85	+12.0
1,171,028	-		Pf6N2E2_1001	0.86	-0.7
1,171,148	+				+12.6
1,171,148	+				+12.5
1,171,148	+				+12.5
1,171,154	+				+11.8
1,171,154	+				+11.5
1,171,154	+				+11.4
1,171,219	+				+12.1
1,171,239	+				+1.6
1,171,239	+				-0.6
1,171,239	+				+1.2
1,171,239	+				+0.3
1,171,239	+				-0.7
1,171,240	-				+0.5
1,171,240	-				+0.5
1,171,334	+				+1.7
1,171,334	+				+3.2
1,171,335	-				-0.7
1,171,396	+		Pf6N2E2_1002	0.15	+3.2
1,171,396	+		Pf6N2E2_1002	0.15	+3.3
1,171,402	+		Pf6N2E2_1002	0.16	+3.8
1,171,402	+		Pf6N2E2_1002	0.16	+2.4
1,171,403	-		Pf6N2E2_1002	0.16	-1.0
1,171,422	+		Pf6N2E2_1002	0.18	+2.0
1,171,481	+		Pf6N2E2_1002	0.24	+3.1
1,171,509	+		Pf6N2E2_1002	0.27	+10.8
1,171,537	+		Pf6N2E2_1002	0.29	+9.4
1,171,537	+		Pf6N2E2_1002	0.29	+9.1
1,171,758	+		Pf6N2E2_1002	0.51	+12.4
1,171,758	+		Pf6N2E2_1002	0.51	+12.3
1,171,758	+		Pf6N2E2_1002	0.51	+12.5
1,171,758	+		Pf6N2E2_1002	0.51	+11.8
1,171,890	+		Pf6N2E2_1002	0.65	+12.6
1,171,890	+		Pf6N2E2_1002	0.65	+12.2
1,171,937	+		Pf6N2E2_1002	0.69	+12.4
1,171,937	+		Pf6N2E2_1002	0.69	+11.5
1,171,937	+		Pf6N2E2_1002	0.69	+12.1
1,171,937	+		Pf6N2E2_1002	0.69	+11.6
1,171,937	+		Pf6N2E2_1002	0.69	+12.0
1,171,938	-		Pf6N2E2_1002	0.69	+0.3
1,171,938	-		Pf6N2E2_1002	0.69	+0.2
1,171,938	-				+3.1
1,171,938	-		Pf6N2E2_1002	0.69	+0.1
1,171,938	-		Pf6N2E2_1002	0.69	-0.5
1,171,938	-		Pf6N2E2_1002	0.69	-0.6
1,171,938	-		Pf6N2E2_1002	0.69	-1.2
1,171,938	-		Pf6N2E2_1002	0.69	-0.9
1,171,939	+		Pf6N2E2_1002	0.69	+11.7
1,171,939	+		Pf6N2E2_1002	0.69	+11.7
1,171,940	-		Pf6N2E2_1002	0.70	-0.4
1,172,004	+		Pf6N2E2_1002	0.76	+11.0
1,172,005	-		Pf6N2E2_1002	0.76	-0.1
1,172,005	-		Pf6N2E2_1002	0.76	-1.4
1,172,092	+		Pf6N2E2_1002	0.85	+11.2
1,172,092	+		Pf6N2E2_1002	0.85	+11.5
1,172,093	-		Pf6N2E2_1002	0.85	-0.5
1,172,093	-		Pf6N2E2_1002	0.85	+0.3
1,172,133	+		Pf6N2E2_1002	0.89	+12.1
1,172,134	-		Pf6N2E2_1002	0.89	-1.1