Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01983 and CCNA_01984 are separated by 57 nucleotides CCNA_01984 and CCNA_01985 overlap by 4 nucleotides
CCNA_01983: CCNA_01983 - citrate synthase, at 2,128,834 to 2,130,114
_01983
CCNA_01984: CCNA_01984 - FlhB-like flagellar protein, at 2,130,172 to 2,130,435
_01984
CCNA_01985: CCNA_01985 - ABC transporter ATP-binding protein, at 2,130,432 to 2,132,201
_01985
Position (kb)
2130
2131 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2130.108 kb on + strand at 2130.111 kb on + strand at 2130.214 kb on + strand, within CCNA_01984 at 2130.221 kb on + strand at 2130.260 kb on + strand, within CCNA_01984 at 2130.332 kb on + strand, within CCNA_01984 at 2130.332 kb on + strand, within CCNA_01984 at 2130.332 kb on + strand, within CCNA_01984 at 2130.332 kb on + strand, within CCNA_01984 at 2130.332 kb on + strand, within CCNA_01984 at 2130.342 kb on + strand, within CCNA_01984 at 2130.377 kb on + strand, within CCNA_01984 at 2130.377 kb on + strand, within CCNA_01984 at 2130.383 kb on - strand, within CCNA_01984 at 2130.383 kb on - strand, within CCNA_01984 at 2130.383 kb on - strand, within CCNA_01984 at 2130.385 kb on - strand, within CCNA_01984 at 2130.385 kb on - strand, within CCNA_01984 at 2130.385 kb on - strand, within CCNA_01984 at 2130.385 kb on - strand, within CCNA_01984 at 2130.403 kb on - strand, within CCNA_01984 at 2130.413 kb on - strand at 2130.441 kb on - strand at 2130.478 kb on - strand at 2130.567 kb on - strand at 2130.592 kb on + strand at 2130.600 kb on - strand at 2130.600 kb on - strand at 2130.656 kb on + strand, within CCNA_01985 at 2130.742 kb on + strand, within CCNA_01985 at 2130.773 kb on - strand, within CCNA_01985 at 2130.843 kb on + strand, within CCNA_01985 at 2130.886 kb on - strand, within CCNA_01985 at 2130.888 kb on + strand, within CCNA_01985 at 2130.896 kb on - strand, within CCNA_01985 at 2130.896 kb on - strand, within CCNA_01985 at 2130.907 kb on + strand, within CCNA_01985 at 2130.907 kb on + strand, within CCNA_01985 at 2130.907 kb on + strand, within CCNA_01985 at 2130.907 kb on + strand, within CCNA_01985 at 2130.945 kb on + strand, within CCNA_01985 at 2130.953 kb on - strand, within CCNA_01985 at 2130.956 kb on + strand, within CCNA_01985 at 2130.970 kb on - strand, within CCNA_01985 at 2130.979 kb on + strand, within CCNA_01985 at 2130.980 kb on + strand, within CCNA_01985 at 2131.123 kb on - strand, within CCNA_01985 at 2131.176 kb on + strand, within CCNA_01985 at 2131.183 kb on + strand, within CCNA_01985 at 2131.185 kb on + strand, within CCNA_01985 at 2131.234 kb on - strand, within CCNA_01985 at 2131.245 kb on - strand, within CCNA_01985 at 2131.386 kb on + strand, within CCNA_01985 at 2131.386 kb on + strand, within CCNA_01985 at 2131.394 kb on - strand, within CCNA_01985 at 2131.433 kb on - strand, within CCNA_01985
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,130,108 + +1.8 2,130,111 + +0.6 2,130,214 + CCNA_01984 0.16 -0.5 2,130,221 + +2.4 2,130,260 + CCNA_01984 0.33 -1.2 2,130,332 + CCNA_01984 0.61 +0.8 2,130,332 + CCNA_01984 0.61 +0.3 2,130,332 + CCNA_01984 0.61 -0.5 2,130,332 + CCNA_01984 0.61 +1.3 2,130,332 + CCNA_01984 0.61 +0.7 2,130,342 + CCNA_01984 0.64 +2.3 2,130,377 + CCNA_01984 0.78 +0.9 2,130,377 + CCNA_01984 0.78 -0.7 2,130,383 - CCNA_01984 0.80 +0.5 2,130,383 - CCNA_01984 0.80 -0.7 2,130,383 - CCNA_01984 0.80 +3.9 2,130,385 - CCNA_01984 0.81 +1.1 2,130,385 - CCNA_01984 0.81 -0.7 2,130,385 - CCNA_01984 0.81 -0.0 2,130,385 - CCNA_01984 0.81 -0.9 2,130,403 - CCNA_01984 0.88 +1.4 2,130,413 - +0.4 2,130,441 - -0.2 2,130,478 - +1.1 2,130,567 - -0.7 2,130,592 + -0.7 2,130,600 - +0.2 2,130,600 - +0.8 2,130,656 + CCNA_01985 0.13 -1.0 2,130,742 + CCNA_01985 0.18 -0.7 2,130,773 - CCNA_01985 0.19 -0.9 2,130,843 + CCNA_01985 0.23 +0.4 2,130,886 - CCNA_01985 0.26 -1.3 2,130,888 + CCNA_01985 0.26 +0.0 2,130,896 - CCNA_01985 0.26 -2.7 2,130,896 - CCNA_01985 0.26 +1.1 2,130,907 + CCNA_01985 0.27 +0.4 2,130,907 + CCNA_01985 0.27 -2.7 2,130,907 + CCNA_01985 0.27 -0.4 2,130,907 + CCNA_01985 0.27 +1.0 2,130,945 + CCNA_01985 0.29 -1.3 2,130,953 - CCNA_01985 0.29 -0.5 2,130,956 + CCNA_01985 0.30 -0.2 2,130,970 - CCNA_01985 0.30 -0.2 2,130,979 + CCNA_01985 0.31 +0.1 2,130,980 + CCNA_01985 0.31 +1.8 2,131,123 - CCNA_01985 0.39 +1.0 2,131,176 + CCNA_01985 0.42 +0.4 2,131,183 + CCNA_01985 0.42 +0.2 2,131,185 + CCNA_01985 0.43 -1.4 2,131,234 - CCNA_01985 0.45 +0.6 2,131,245 - CCNA_01985 0.46 +0.7 2,131,386 + CCNA_01985 0.54 -2.5 2,131,386 + CCNA_01985 0.54 -0.6 2,131,394 - CCNA_01985 0.54 +0.2 2,131,433 - CCNA_01985 0.57 +0.2
Or see this region's nucleotide sequence