Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24165

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
5,885,209	+				+0.1
5,885,224	-				-0.1
5,885,239	+				+1.4
5,885,278	-				-0.3
5,885,334	+				-0.3
5,885,366	+				-0.2
5,885,367	-				+0.2
5,885,376	+				-1.9
5,885,376	+				-4.3
5,885,377	-				-0.0
5,885,377	-				+0.3
5,885,377	-				-0.4
5,885,473	+		CA265_RS24160	0.14	-0.0
5,885,474	-		CA265_RS24160	0.14	-0.8
5,885,551	-				+0.8
5,885,570	-		CA265_RS24160	0.26	-0.1
5,885,572	-		CA265_RS24160	0.26	-1.0
5,885,572	-		CA265_RS24160	0.26	-1.0
5,885,572	-		CA265_RS24160	0.26	-0.7
5,885,572	-		CA265_RS24160	0.26	+0.1
5,885,657	+		CA265_RS24160	0.36	-1.0
5,885,771	-		CA265_RS24160	0.50	-0.9
5,885,916	-		CA265_RS24160	0.68	-0.1
5,885,969	-		CA265_RS24160	0.74	+0.4
5,886,001	+		CA265_RS24160	0.78	-1.6
5,886,002	-		CA265_RS24160	0.78	-0.8
5,886,165	+				+0.4
5,886,169	+				-0.2
5,886,274	-		CA265_RS24165	0.15	+1.4
5,886,311	-		CA265_RS24165	0.21	+0.6
5,886,338	+		CA265_RS24165	0.25	-1.0
5,886,349	-		CA265_RS24165	0.27	-0.4
5,886,447	-		CA265_RS24165	0.42	+0.4
5,886,459	-		CA265_RS24165	0.43	+0.4
5,886,497	-		CA265_RS24165	0.49	-0.4
5,886,505	+		CA265_RS24165	0.50	-0.5
5,886,506	-		CA265_RS24165	0.51	-0.3
5,886,507	+		CA265_RS24165	0.51	-1.2
5,886,536	+		CA265_RS24165	0.55	-0.5
5,886,579	+		CA265_RS24165	0.62	-0.8
5,886,580	-		CA265_RS24165	0.62	-0.3
5,886,597	+		CA265_RS24165	0.65	-1.3
5,886,652	+		CA265_RS24165	0.73	-0.1
5,886,652	+		CA265_RS24165	0.73	+0.5
5,886,653	-		CA265_RS24165	0.73	+0.3
5,886,735	+		CA265_RS24165	0.86	-0.3
5,886,776	+				-0.1
5,886,918	-				+1.3
5,886,971	-				+0.2
5,886,987	-				+1.1
5,886,987	-				+0.2
5,886,995	-				-0.1
5,886,995	-				-1.1
5,887,022	-				+0.9
5,887,022	-				+0.5
5,887,050	-				+0.8
5,887,170	-		CA265_RS24170	0.19	-1.2
5,887,264	+		CA265_RS24170	0.27	-0.4
5,887,335	-		CA265_RS24170	0.33	-0.1
5,887,375	-		CA265_RS24170	0.36	+0.8
5,887,475	+		CA265_RS24170	0.44	-0.4
5,887,475	+				-0.0
5,887,476	-		CA265_RS24170	0.45	-1.2
5,887,479	+		CA265_RS24170	0.45	+1.0
5,887,479	+		CA265_RS24170	0.45	+1.6
5,887,479	+		CA265_RS24170	0.45	-0.2
5,887,480	-		CA265_RS24170	0.45	+0.2
5,887,612	+		CA265_RS24170	0.56	-0.2
5,887,712	+		CA265_RS24170	0.64	+0.4
5,887,790	+		CA265_RS24170	0.71	+0.3
5,887,821	-		CA265_RS24170	0.73	+0.6