Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS23525

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
5,750,828	-		CA265_RS23520	0.11	+0.7
5,750,833	+		CA265_RS23520	0.11	+0.3
5,750,834	-		CA265_RS23520	0.11	+1.0
5,750,834	-		CA265_RS23520	0.11	+0.6
5,750,834	-		CA265_RS23520	0.11	+1.7
5,750,834	-		CA265_RS23520	0.11	+0.4
5,750,949	+		CA265_RS23520	0.24	+0.5
5,750,997	+		CA265_RS23520	0.29	-0.3
5,751,037	+		CA265_RS23520	0.34	+0.9
5,751,067	-		CA265_RS23520	0.37	+1.0
5,751,082	-		CA265_RS23520	0.39	+0.6
5,751,109	+		CA265_RS23520	0.42	+0.7
5,751,110	-		CA265_RS23520	0.42	+1.0
5,751,136	+		CA265_RS23520	0.45	+1.1
5,751,137	-		CA265_RS23520	0.45	+0.7
5,751,138	+		CA265_RS23520	0.45	+0.2
5,751,139	-		CA265_RS23520	0.45	-0.2
5,751,141	+		CA265_RS23520	0.45	+0.7
5,751,185	+		CA265_RS23520	0.50	+1.0
5,751,313	+		CA265_RS23520	0.64	+0.4
5,751,363	-		CA265_RS23520	0.70	+0.1
5,751,411	+		CA265_RS23520	0.75	+0.3
5,751,412	-		CA265_RS23520	0.75	+1.1
5,751,426	-		CA265_RS23520	0.77	+0.8
5,751,426	-				+2.7
5,751,451	-		CA265_RS23520	0.80	+0.8
5,751,483	+		CA265_RS23520	0.83	+0.1
5,751,484	-		CA265_RS23520	0.83	+0.8
5,751,484	-		CA265_RS23520	0.83	+0.4
5,751,541	-		CA265_RS23520	0.90	+0.7
5,751,742	+				-2.6
5,751,927	-		CA265_RS23525	0.12	+0.7
5,751,938	+		CA265_RS23525	0.13	-0.3
5,751,946	+		CA265_RS23525	0.14	+0.6
5,751,950	+		CA265_RS23525	0.14	+0.8
5,752,014	-		CA265_RS23525	0.17	+0.8
5,752,113	+				+2.7
5,752,144	+		CA265_RS23525	0.25	+0.6
5,752,145	-		CA265_RS23525	0.25	+0.2
5,752,149	-		CA265_RS23525	0.25	+0.8
5,752,248	+		CA265_RS23525	0.31	+0.1
5,752,249	-		CA265_RS23525	0.31	+0.2
5,752,279	+		CA265_RS23525	0.33	+0.1
5,752,279	+		CA265_RS23525	0.33	+0.4
5,752,280	-		CA265_RS23525	0.33	-0.9
5,752,288	-		CA265_RS23525	0.33	+1.2
5,752,399	+		CA265_RS23525	0.40	+0.6
5,752,400	-		CA265_RS23525	0.40	+1.7
5,752,400	-		CA265_RS23525	0.40	+1.0
5,752,419	+		CA265_RS23525	0.41	+1.4
5,752,450	+		CA265_RS23525	0.43	+0.8
5,752,451	-		CA265_RS23525	0.43	-0.5
5,752,456	+		CA265_RS23525	0.43	+0.0
5,752,457	-		CA265_RS23525	0.43	+1.4
5,752,457	-		CA265_RS23525	0.43	+0.9
5,752,482	-		CA265_RS23525	0.45	+1.1
5,752,532	-		CA265_RS23525	0.48	+2.2
5,752,638	-		CA265_RS23525	0.54	+0.5
5,752,687	-		CA265_RS23525	0.57	-0.8
5,752,817	+		CA265_RS23525	0.64	-0.3
5,752,822	+		CA265_RS23525	0.65	+0.8
5,752,822	+		CA265_RS23525	0.65	+0.8
5,752,879	+		CA265_RS23525	0.68	+0.1
5,752,911	-		CA265_RS23525	0.70	+1.0
5,752,923	-		CA265_RS23525	0.70	+0.3
5,752,983	+		CA265_RS23525	0.74	+1.0
5,752,983	+		CA265_RS23525	0.74	+1.7
5,752,984	-		CA265_RS23525	0.74	-0.2
5,752,989	+		CA265_RS23525	0.74	+1.7
5,752,990	-		CA265_RS23525	0.74	-0.7
5,752,992	+		CA265_RS23525	0.74	+0.7
5,752,995	+		CA265_RS23525	0.75	+0.8
5,753,130	+		CA265_RS23525	0.83	+1.1
5,753,131	-		CA265_RS23525	0.83	+0.5
5,753,131	-		CA265_RS23525	0.83	+2.2
5,753,148	-		CA265_RS23525	0.84	+0.2
5,753,211	+		CA265_RS23525	0.87	+0.8
5,753,286	-				+0.2
5,753,304	+				+0.8
5,753,305	-				+0.4
5,753,353	+				+1.5
5,753,428	-				-0.0
5,753,920	+				+0.8
5,754,055	+				-3.0