Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12340

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
3,075,770	+		CA265_RS12335	0.75	+0.2
3,075,770	+		CA265_RS12335	0.75	+0.4
3,075,780	+		CA265_RS12335	0.76	-1.8
3,075,965	+		CA265_RS12335	0.82	-0.3
3,075,965	+		CA265_RS12335	0.82	-0.4
3,075,966	-		CA265_RS12335	0.82	-0.4
3,075,966	-		CA265_RS12335	0.82	+0.2
3,076,066	-		CA265_RS12335	0.86	-0.7
3,076,071	+		CA265_RS12335	0.86	-0.7
3,076,071	+		CA265_RS12335	0.86	-0.2
3,076,072	-		CA265_RS12335	0.86	-0.1
3,076,072	-		CA265_RS12335	0.86	-1.7
3,076,092	+		CA265_RS12335	0.87	+1.1
3,076,093	-		CA265_RS12335	0.87	+0.1
3,076,093	-		CA265_RS12335	0.87	-0.6
3,076,093	-		CA265_RS12335	0.87	-1.3
3,076,158	+		CA265_RS12335	0.89	+0.7
3,076,158	+		CA265_RS12335	0.89	-0.3
3,076,158	+		CA265_RS12335	0.89	-0.6
3,076,232	+				+0.3
3,076,238	+				+0.6
3,076,287	+				+1.3
3,076,348	+				-0.1
3,076,417	-				-0.6
3,076,419	+				+0.0
3,076,489	+				+0.3
3,076,553	-				+0.2
3,076,582	+				+0.3
3,076,594	+				+1.1
3,076,605	+				-0.1
3,076,606	-				+0.6
3,076,606	-				-0.4
3,076,689	+		CA265_RS12340	0.12	+0.5
3,076,701	+		CA265_RS12340	0.17	+0.3
3,076,701	+		CA265_RS12340	0.17	+1.1
3,076,780	+		CA265_RS12340	0.50	-0.1
3,076,781	-		CA265_RS12340	0.51	-0.1
3,076,841	+		CA265_RS12340	0.76	+0.7
3,076,880	+				-1.0
3,076,899	+				+1.9
3,076,914	-				+0.1
3,076,916	-				+0.2
3,076,980	+				-1.9
3,076,981	-				-0.9
3,076,984	+				+0.1
3,076,984	+				+1.7
3,076,985	-				-0.8
3,076,985	-				+0.7
3,077,048	-				+0.1
3,077,137	-				-0.2
3,077,179	-				-0.3
3,077,265	-				-0.6
3,077,266	+				-0.0
3,077,278	+				+0.4
3,077,279	-				+0.5
3,077,310	-				+0.4
3,077,353	+				-0.0
3,077,431	-				-0.9
3,077,580	+				+1.5
3,077,580	+				-0.3
3,077,581	-				+0.3
3,077,584	+				-0.4
3,077,614	-				+0.1
3,077,705	-		CA265_RS12345	0.13	-0.8
3,077,739	+		CA265_RS12345	0.14	+0.3
3,077,825	+		CA265_RS12345	0.17	-0.9