Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11765

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
2,914,815	-		CA265_RS11760	0.49	-3.0
2,914,815	-		CA265_RS11760	0.49	-2.5
2,914,961	+		CA265_RS11760	0.57	+0.1
2,914,961	+		CA265_RS11760	0.57	+0.3
2,914,961	+		CA265_RS11760	0.57	+0.6
2,914,963	+		CA265_RS11760	0.57	+0.5
2,915,261	+		CA265_RS11760	0.72	+0.0
2,915,403	-		CA265_RS11760	0.79	-3.1
2,915,413	-		CA265_RS11760	0.80	-1.2
2,915,415	-		CA265_RS11760	0.80	-1.2
2,915,434	-		CA265_RS11760	0.81	-2.1
2,915,465	-		CA265_RS11760	0.82	-3.7
2,915,516	-		CA265_RS11760	0.85	-1.7
2,915,516	-		CA265_RS11760	0.85	+0.1
2,915,535	+		CA265_RS11760	0.86	+0.8
2,915,641	-				-0.3
2,915,741	+				+0.0
2,915,745	+				-0.8
2,915,745	+				-0.5
2,915,751	-				-2.5
2,915,755	+				+0.1
2,915,798	+				+0.5
2,915,812	-				-1.9
2,915,816	-				-0.5
2,915,823	-				-0.3
2,915,829	+				-0.4
2,915,844	+				-0.1
2,915,844	+				-1.4
2,915,845	-				-1.4
2,915,924	+		CA265_RS11765	0.13	+0.1
2,915,924	+		CA265_RS11765	0.13	+0.7
2,915,924	+		CA265_RS11765	0.13	+0.3
2,915,958	+		CA265_RS11765	0.17	-0.6
2,915,968	+		CA265_RS11765	0.18	+0.3
2,916,044	+		CA265_RS11765	0.27	+0.4
2,916,091	+		CA265_RS11765	0.33	-0.8
2,916,162	-		CA265_RS11765	0.41	+1.0
2,916,196	-		CA265_RS11765	0.45	-0.5
2,916,239	+		CA265_RS11765	0.50	+0.8
2,916,239	+		CA265_RS11765	0.50	+0.4
2,916,240	-		CA265_RS11765	0.50	-1.2
2,916,362	-		CA265_RS11765	0.65	-1.6
2,916,392	+		CA265_RS11765	0.68	+0.1
2,916,418	-		CA265_RS11765	0.71	-1.0
2,916,491	+		CA265_RS11765	0.80	-0.7
2,916,492	-		CA265_RS11765	0.80	-1.0
2,916,500	-		CA265_RS11765	0.81	-0.2
2,916,500	-		CA265_RS11765	0.81	-0.8
2,916,522	-		CA265_RS11765	0.84	-1.0
2,916,584	+				-0.7
2,916,646	-				-1.7
2,916,719	-				+1.5
2,916,719	-				-0.7
2,916,770	+				+0.4
2,916,771	-				-2.6
2,916,771	-				-1.2
2,916,786	-				-2.5
2,916,820	-		CA265_RS11770	0.12	-2.7
2,916,905	-		CA265_RS11770	0.20	-2.6
2,916,905	-		CA265_RS11770	0.20	-2.9
2,917,067	-		CA265_RS11770	0.33	-1.5
2,917,068	+		CA265_RS11770	0.33	+0.2
2,917,130	+		CA265_RS11770	0.38	+0.3
2,917,274	+		CA265_RS11770	0.51	+0.4
2,917,276	+		CA265_RS11770	0.51	+0.6
2,917,277	-		CA265_RS11770	0.51	-1.8
2,917,311	-		CA265_RS11770	0.54	-1.1
2,917,313	-		CA265_RS11770	0.54	+0.8
2,917,466	+		CA265_RS11770	0.67	-0.1
2,917,467	-		CA265_RS11770	0.67	-1.8
2,917,469	+		CA265_RS11770	0.67	+0.0
2,917,470	-		CA265_RS11770	0.67	-1.9
2,917,477	+		CA265_RS11770	0.68	+0.6
2,917,516	+		CA265_RS11770	0.71	+0.1
2,917,544	+		CA265_RS11770	0.73	-0.2
2,917,576	+		CA265_RS11770	0.76	+1.2
2,917,576	+		CA265_RS11770	0.76	-0.5
2,917,580	+		CA265_RS11770	0.76	-0.3
2,917,658	+		CA265_RS11770	0.83	+1.8