Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09005

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
2,245,290	+		CA265_RS08995	0.79	+0.4
2,245,338	-		CA265_RS08995	0.81	+0.5
2,245,450	-		CA265_RS08995	0.86	+1.2
2,245,451	+		CA265_RS08995	0.86	-0.2
2,245,462	+		CA265_RS08995	0.86	-0.7
2,245,493	-		CA265_RS08995	0.88	-0.8
2,245,545	-		CA265_RS08995	0.90	+0.7
2,245,552	+				+0.9
2,245,552	+				+0.4
2,245,556	+				+0.1
2,245,634	+				-0.2
2,245,636	+				+0.3
2,245,659	-				+0.6
2,245,687	-				+0.6
2,245,687	-				+0.4
2,245,706	-				+0.3
2,245,710	-				+0.6
2,245,710	-				-0.1
2,245,719	+				+0.9
2,245,719	+				+0.2
2,245,720	-				+1.1
2,245,731	-				+0.4
2,245,734	+				+2.8
2,245,893	-				+0.7
2,245,897	-				+1.3
2,245,950	+				-0.2
2,246,045	-				+0.2
2,246,169	-		CA265_RS09000	0.68	+1.1
2,246,189	+		CA265_RS09000	0.78	+0.3
2,246,231	+				+1.2
2,247,347	-				+0.9
2,247,386	+				-0.1
2,247,587	-		CA265_RS09010	0.20	+0.8
2,247,617	+		CA265_RS09010	0.24	+0.3
2,247,630	+		CA265_RS09010	0.25	-0.6
2,247,713	-		CA265_RS09010	0.34	-0.2
2,247,799	-		CA265_RS09010	0.43	+0.1
2,247,836	+		CA265_RS09010	0.47	-0.3
2,247,867	-		CA265_RS09010	0.50	+2.2
2,247,916	+		CA265_RS09010	0.55	+1.0
2,247,916	+		CA265_RS09010	0.55	+0.4
2,247,916	+		CA265_RS09010	0.55	+0.4
2,247,917	-		CA265_RS09010	0.55	-0.3
2,248,008	-		CA265_RS09010	0.65	+1.7
2,248,008	-		CA265_RS09010	0.65	+0.6
2,248,030	+		CA265_RS09010	0.67	+0.2
2,248,100	+		CA265_RS09010	0.75	-1.0
2,248,101	-		CA265_RS09010	0.75	+2.1
2,248,156	+		CA265_RS09010	0.80	+3.3
2,248,259	+				+1.4
2,248,260	-				-0.2
2,248,260	-				-0.6