Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07585

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
1,903,923	-		CA265_RS07580	0.16	-0.6
1,903,923	-		CA265_RS07580	0.16	-0.0
1,903,991	+		CA265_RS07580	0.22	-0.1
1,904,037	-		CA265_RS07580	0.26	-0.6
1,904,076	+		CA265_RS07580	0.30	+1.4
1,904,076	+		CA265_RS07580	0.30	+0.0
1,904,091	-		CA265_RS07580	0.31	-0.6
1,904,129	+		CA265_RS07580	0.35	+0.5
1,904,268	-		CA265_RS07580	0.48	-0.2
1,904,270	+		CA265_RS07580	0.48	-1.0
1,904,289	+		CA265_RS07580	0.50	-0.4
1,904,290	-		CA265_RS07580	0.50	-0.3
1,904,339	+		CA265_RS07580	0.54	+0.6
1,904,340	-		CA265_RS07580	0.54	+0.5
1,904,394	-		CA265_RS07580	0.59	-0.2
1,904,394	-		CA265_RS07580	0.59	+0.5
1,904,415	-		CA265_RS07580	0.61	+0.4
1,904,432	-		CA265_RS07580	0.63	+0.6
1,904,496	-		CA265_RS07580	0.69	+0.1
1,904,498	-		CA265_RS07580	0.69	-0.3
1,904,661	+		CA265_RS07580	0.84	+0.3
1,904,680	+		CA265_RS07580	0.86	+0.6
1,904,680	+		CA265_RS07580	0.86	-0.2
1,904,681	-		CA265_RS07580	0.86	-0.6
1,904,740	-				-0.1
1,904,740	-				+0.3
1,904,745	+				+0.9
1,904,860	+				+0.5
1,904,860	+				-0.1
1,904,861	-				+0.1
1,904,969	-				-0.2
1,904,985	+				+0.6
1,904,986	-				-1.5
1,904,986	-				+0.0
1,905,022	+		CA265_RS07585	0.13	-0.3
1,905,028	-		CA265_RS07585	0.14	-0.8
1,905,050	+		CA265_RS07585	0.17	-1.6
1,905,137	+		CA265_RS07585	0.29	+0.5
1,905,137	+		CA265_RS07585	0.29	+0.2
1,905,138	-		CA265_RS07585	0.29	-0.2
1,905,140	+		CA265_RS07585	0.29	+1.0
1,905,142	+		CA265_RS07585	0.30	+0.9
1,905,212	+		CA265_RS07585	0.39	+0.7
1,905,212	+		CA265_RS07585	0.39	-0.4
1,905,218	-		CA265_RS07585	0.40	-0.4
1,905,218	-		CA265_RS07585	0.40	-0.5
1,905,218	-		CA265_RS07585	0.40	-1.2
1,905,263	+		CA265_RS07585	0.46	+0.1
1,905,264	-		CA265_RS07585	0.46	-1.3
1,905,295	+		CA265_RS07585	0.50	-2.5
1,905,295	+		CA265_RS07585	0.50	+0.2
1,905,369	-		CA265_RS07585	0.60	-0.0
1,905,405	-		CA265_RS07585	0.65	+0.2
1,905,561	+		CA265_RS07585	0.86	-0.7
1,905,572	-		CA265_RS07585	0.88	-1.1
1,905,574	+		CA265_RS07585	0.88	+0.2
1,905,656	-				-0.2
1,905,681	+				+0.0
1,905,693	+				-0.2
1,905,732	-				-0.0
1,905,761	+				+0.2
1,905,762	-				-1.1
1,905,767	-				+0.3
1,905,771	-				+0.3
1,905,807	+				+0.5
1,905,904	-				+0.6
1,905,906	-				+0.4
1,905,979	+				-0.3
1,905,984	+		CA265_RS07590	0.11	-0.3
1,906,000	+		CA265_RS07590	0.17	+0.2
1,906,001	-		CA265_RS07590	0.17	+0.9
1,906,095	-		CA265_RS07590	0.51	+0.2
1,906,172	-		CA265_RS07590	0.79	+0.1
1,906,203	+				+0.1
1,906,204	-				+0.3
1,906,207	-				+0.7
1,906,207	-				+0.8
1,906,211	-				+0.2
1,906,253	-				+1.7
1,906,259	-				-0.5
1,906,273	+				+0.3
1,906,279	+				+0.4
1,906,295	-				+0.6
1,906,315	+				+0.5
1,906,388	-				+0.3
1,906,479	+				+1.3
1,906,512	-		CA265_RS07595	0.12	-0.5
1,906,522	+		CA265_RS07595	0.13	+0.7
1,906,532	+		CA265_RS07595	0.14	+1.0
1,906,533	-		CA265_RS07595	0.14	+0.4
1,906,533	-		CA265_RS07595	0.14	-0.1
1,906,562	+		CA265_RS07595	0.17	+0.5
1,906,567	+		CA265_RS07595	0.18	-0.1
1,906,568	-		CA265_RS07595	0.18	-1.1