Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06010

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
1,476,380	+				-1.2
1,476,381	-				+0.5
1,476,381	-				+0.0
1,476,381	-				-0.8
1,476,381	-				+0.1
1,476,382	+				-0.2
1,476,428	+				-0.6
1,476,429	-				-0.6
1,476,441	-				-0.3
1,476,443	+				+0.5
1,476,443	+				-0.7
1,476,443	+				-0.6
1,476,443	+				+1.2
1,476,444	-				-0.4
1,476,497	-				-0.3
1,476,559	-				-1.1
1,476,585	-				-0.1
1,476,672	-				-1.4
1,476,684	-				-0.8
1,476,690	-				-0.6
1,476,833	+				-0.2
1,476,871	+		CA265_RS06005	0.11	-0.1
1,476,880	+		CA265_RS06005	0.13	-0.3
1,476,894	-		CA265_RS06005	0.15	+0.1
1,476,964	-		CA265_RS06005	0.28	+0.6
1,476,975	-		CA265_RS06005	0.30	-0.1
1,476,978	-		CA265_RS06005	0.31	-0.8
1,476,991	+		CA265_RS06005	0.33	-0.7
1,476,991	+		CA265_RS06005	0.33	-1.2
1,476,992	-		CA265_RS06005	0.33	-0.9
1,477,034	-		CA265_RS06005	0.41	-0.6
1,477,034	-		CA265_RS06005	0.41	+0.3
1,477,034	-		CA265_RS06005	0.41	+0.1
1,477,034	-		CA265_RS06005	0.41	+0.3
1,477,053	+		CA265_RS06005	0.45	-0.1
1,477,056	-		CA265_RS06005	0.45	+0.1
1,477,092	-		CA265_RS06005	0.52	+0.6
1,477,191	-		CA265_RS06005	0.70	+0.2
1,477,199	-		CA265_RS06005	0.71	-0.7
1,477,221	-		CA265_RS06005	0.75	+0.7
1,477,251	-		CA265_RS06005	0.81	+0.1
1,477,296	+		CA265_RS06005	0.89	-0.3
1,477,309	+				-0.5
1,477,309	+				-1.3
1,477,314	+				+0.7
1,477,337	-				+0.1
1,477,365	-				-0.6
1,477,435	-		CA265_RS06010	0.30	+0.1
1,477,466	-		CA265_RS06010	0.40	+0.3
1,477,512	-		CA265_RS06010	0.55	+0.4
1,477,578	+		CA265_RS06010	0.77	+1.1
1,477,625	-				-1.3
1,477,636	-				-0.2
1,477,663	+				+0.1
1,477,669	+				-0.1
1,477,670	-				+0.6
1,477,670	-				-0.7
1,477,730	-		CA265_RS06015	0.12	+0.3
1,477,772	+		CA265_RS06015	0.19	+0.6
1,477,773	-		CA265_RS06015	0.19	-0.9
1,477,773	-		CA265_RS06015	0.19	+0.2
1,477,776	-		CA265_RS06015	0.20	+1.0
1,477,792	+		CA265_RS06015	0.22	-0.2
1,477,835	-		CA265_RS06015	0.29	+0.1
1,477,885	+		CA265_RS06015	0.36	-0.5
1,477,906	+		CA265_RS06015	0.40	+0.3
1,477,907	-		CA265_RS06015	0.40	-0.4
1,477,946	-		CA265_RS06015	0.46	+0.1
1,477,957	+		CA265_RS06015	0.48	-0.5
1,478,004	+		CA265_RS06015	0.55	-0.1
1,478,009	-		CA265_RS06015	0.56	-0.0
1,478,014	+		CA265_RS06015	0.56	-0.5
1,478,014	+		CA265_RS06015	0.56	-0.9
1,478,015	-		CA265_RS06015	0.56	+0.3
1,478,015	-		CA265_RS06015	0.56	+0.5
1,478,070	-		CA265_RS06015	0.65	-0.6
1,478,078	-		CA265_RS06015	0.66	-0.3
1,478,080	-		CA265_RS06015	0.67	-0.2
1,478,130	+		CA265_RS06015	0.74	+0.7
1,478,249	+				-0.1
1,478,250	-				+0.1
1,478,252	+				+0.2
1,478,252	+				-0.2
1,478,281	+				+0.1
1,478,338	-				-0.2
1,478,374	+		CA265_RS06020	0.13	-0.1
1,478,393	+		CA265_RS06020	0.17	+0.4
1,478,418	+		CA265_RS06020	0.21	-0.9
1,478,418	+		CA265_RS06020	0.21	-0.3
1,478,418	+		CA265_RS06020	0.21	+0.8
1,478,418	+		CA265_RS06020	0.21	-1.0
1,478,419	-		CA265_RS06020	0.22	+0.8
1,478,419	-		CA265_RS06020	0.22	-0.1
1,478,528	-		CA265_RS06020	0.42	+0.9
1,478,537	-		CA265_RS06020	0.43	-0.1
1,478,566	-		CA265_RS06020	0.48	-2.0
1,478,576	+		CA265_RS06020	0.50	+0.5
1,478,581	-		CA265_RS06020	0.51	-0.5
1,478,622	+		CA265_RS06020	0.59	-0.7