Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1396

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1394 and Ac3H11_1395 overlap by 4 nucleotidesAc3H11_1395 and Ac3H11_1396 are separated by 26 nucleotidesAc3H11_1396 and Ac3H11_1397 are separated by 114 nucleotides Ac3H11_1394 - Galactoside O-acetyltransferase (EC 2.3.1.18), at 82,646 to 83,134 _1394 Ac3H11_1395 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 83,131 to 83,946 _1395 Ac3H11_1396 - Cephalosporin hydroxylase, at 83,973 to 84,752 _1396 Ac3H11_1397 - TPR domain protein, putative component of TonB system, at 84,867 to 87,086 _1397 Position (kb) 83 84 85Strain fitness (log2 ratio) -2 -1 0 1 2at 83.085 kb on - strand, within Ac3H11_1394at 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.091 kb on + strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.092 kb on - strandat 83.093 kb on + strandat 83.093 kb on + strandat 83.093 kb on + strandat 83.094 kb on - strandat 83.094 kb on - strandat 83.157 kb on + strandat 83.158 kb on - strandat 83.179 kb on + strandat 83.179 kb on + strandat 83.180 kb on - strandat 83.287 kb on + strand, within Ac3H11_1395at 83.287 kb on + strand, within Ac3H11_1395at 83.287 kb on + strand, within Ac3H11_1395at 83.287 kb on + strand, within Ac3H11_1395at 83.287 kb on + strand, within Ac3H11_1395at 83.288 kb on - strand, within Ac3H11_1395at 83.288 kb on - strand, within Ac3H11_1395at 83.398 kb on + strand, within Ac3H11_1395at 83.398 kb on + strand, within Ac3H11_1395at 83.399 kb on - strand, within Ac3H11_1395at 83.399 kb on - strand, within Ac3H11_1395at 83.419 kb on + strand, within Ac3H11_1395at 83.419 kb on + strand, within Ac3H11_1395at 83.420 kb on - strand, within Ac3H11_1395at 83.420 kb on - strand, within Ac3H11_1395at 83.420 kb on - strand, within Ac3H11_1395at 83.420 kb on - strand, within Ac3H11_1395at 83.482 kb on + strand, within Ac3H11_1395at 83.482 kb on + strand, within Ac3H11_1395at 83.482 kb on + strand, within Ac3H11_1395at 83.482 kb on + strand, within Ac3H11_1395at 83.483 kb on - strand, within Ac3H11_1395at 83.483 kb on - strand, within Ac3H11_1395at 83.488 kb on + strand, within Ac3H11_1395at 83.488 kb on + strand, within Ac3H11_1395at 83.488 kb on + strand, within Ac3H11_1395at 83.488 kb on + strand, within Ac3H11_1395at 83.488 kb on + strand, within Ac3H11_1395at 83.489 kb on - strand, within Ac3H11_1395at 83.489 kb on - strand, within Ac3H11_1395at 83.489 kb on - strand, within Ac3H11_1395at 83.489 kb on - strand, within Ac3H11_1395at 83.489 kb on - strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.680 kb on + strand, within Ac3H11_1395at 83.681 kb on - strand, within Ac3H11_1395at 83.681 kb on - strand, within Ac3H11_1395at 83.746 kb on + strand, within Ac3H11_1395at 83.746 kb on + strand, within Ac3H11_1395at 83.746 kb on + strand, within Ac3H11_1395at 83.822 kb on + strand, within Ac3H11_1395at 83.823 kb on - strand, within Ac3H11_1395at 83.823 kb on - strand, within Ac3H11_1395at 83.965 kb on + strandat 84.024 kb on + strandat 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.090 kb on + strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.091 kb on - strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.096 kb on + strand, within Ac3H11_1396at 84.097 kb on - strand, within Ac3H11_1396at 84.097 kb on - strand, within Ac3H11_1396at 84.097 kb on - strand, within Ac3H11_1396at 84.133 kb on - strand, within Ac3H11_1396at 84.525 kb on + strand, within Ac3H11_1396at 84.525 kb on + strand, within Ac3H11_1396at 84.526 kb on - strand, within Ac3H11_1396at 84.526 kb on - strand, within Ac3H11_1396at 84.526 kb on - strand, within Ac3H11_1396at 84.552 kb on + strand, within Ac3H11_1396at 84.552 kb on + strand, within Ac3H11_1396at 84.552 kb on + strand, within Ac3H11_1396at 84.552 kb on + strand, within Ac3H11_1396at 84.552 kb on + strand, within Ac3H11_1396at 84.553 kb on - strand, within Ac3H11_1396at 84.553 kb on - strand, within Ac3H11_1396at 84.553 kb on - strand, within Ac3H11_1396at 84.766 kb on + strandat 84.766 kb on + strandat 84.796 kb on - strandat 84.925 kb on + strandat 84.925 kb on + strandat 84.925 kb on + strandat 84.925 kb on + strandat 84.926 kb on - strandat 84.926 kb on - strandat 84.926 kb on - strandat 84.926 kb on - strandat 84.926 kb on - strandat 85.377 kb on + strand, within Ac3H11_1397at 85.377 kb on + strand, within Ac3H11_1397at 85.377 kb on + strand, within Ac3H11_1397at 85.377 kb on + strand, within Ac3H11_1397at 85.378 kb on - strand, within Ac3H11_1397at 85.378 kb on - strand, within Ac3H11_1397at 85.378 kb on - strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.453 kb on + strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.454 kb on - strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.636 kb on + strand, within Ac3H11_1397at 85.637 kb on - strand, within Ac3H11_1397at 85.637 kb on - strand, within Ac3H11_1397at 85.645 kb on + strand, within Ac3H11_1397at 85.645 kb on + strand, within Ac3H11_1397at 85.645 kb on + strand, within Ac3H11_1397at 85.645 kb on + strand, within Ac3H11_1397at 85.721 kb on - strand, within Ac3H11_1397

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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83,085 - Ac3H11_1394 0.90 -1.4
83,091 + -0.2
83,091 + -0.8
83,091 + +0.4
83,091 + -0.3
83,091 + -0.2
83,091 + -0.4
83,091 + -0.7
83,091 + -0.9
83,091 + -1.0
83,091 + -0.2
83,091 + -0.2
83,091 + -1.5
83,091 + -0.4
83,091 + -0.4
83,091 + -0.8
83,091 + -0.8
83,091 + -0.7
83,092 - -0.9
83,092 - -0.7
83,092 - -0.1
83,092 - -1.0
83,092 - -1.0
83,092 - -1.2
83,092 - -0.9
83,092 - -0.2
83,092 - -0.6
83,092 - -0.6
83,092 - -1.1
83,092 - -1.2
83,092 - -0.2
83,092 - +0.4
83,092 - -1.1
83,092 - -0.3
83,092 - +0.1
83,092 - -0.1
83,092 - -0.9
83,092 - -0.7
83,092 - -0.6
83,092 - +0.3
83,092 - -0.2
83,092 - -0.2
83,093 + -0.6
83,093 + +0.0
83,093 + -1.2
83,094 - -0.8
83,094 - +0.1
83,157 + -0.3
83,158 - -0.2
83,179 + -1.0
83,179 + +0.5
83,180 - -0.3
83,287 + Ac3H11_1395 0.19 -1.5
83,287 + Ac3H11_1395 0.19 -0.8
83,287 + Ac3H11_1395 0.19 +0.3
83,287 + Ac3H11_1395 0.19 -0.6
83,287 + Ac3H11_1395 0.19 -0.5
83,288 - Ac3H11_1395 0.19 +0.8
83,288 - Ac3H11_1395 0.19 -0.4
83,398 + Ac3H11_1395 0.33 -0.2
83,398 + Ac3H11_1395 0.33 -0.1
83,399 - Ac3H11_1395 0.33 -0.2
83,399 - Ac3H11_1395 0.33 +0.5
83,419 + Ac3H11_1395 0.35 -0.0
83,419 + Ac3H11_1395 0.35 -0.2
83,420 - Ac3H11_1395 0.35 -0.3
83,420 - Ac3H11_1395 0.35 -1.5
83,420 - Ac3H11_1395 0.35 -0.9
83,420 - Ac3H11_1395 0.35 -1.0
83,482 + Ac3H11_1395 0.43 -1.5
83,482 + Ac3H11_1395 0.43 -0.6
83,482 + Ac3H11_1395 0.43 +0.2
83,482 + Ac3H11_1395 0.43 -1.2
83,483 - Ac3H11_1395 0.43 +0.3
83,483 - Ac3H11_1395 0.43 -0.5
83,488 + Ac3H11_1395 0.44 -1.3
83,488 + Ac3H11_1395 0.44 -0.4
83,488 + Ac3H11_1395 0.44 -0.6
83,488 + Ac3H11_1395 0.44 +1.1
83,488 + Ac3H11_1395 0.44 -0.3
83,489 - Ac3H11_1395 0.44 +1.0
83,489 - Ac3H11_1395 0.44 +0.2
83,489 - Ac3H11_1395 0.44 -1.1
83,489 - Ac3H11_1395 0.44 -0.4
83,489 - Ac3H11_1395 0.44 -0.4
83,680 + Ac3H11_1395 0.67 -1.2
83,680 + Ac3H11_1395 0.67 -0.3
83,680 + Ac3H11_1395 0.67 -1.0
83,680 + Ac3H11_1395 0.67 -0.1
83,680 + Ac3H11_1395 0.67 +0.3
83,680 + Ac3H11_1395 0.67 -0.7
83,680 + Ac3H11_1395 0.67 -0.8
83,681 - Ac3H11_1395 0.67 -0.3
83,681 - Ac3H11_1395 0.67 -0.2
83,746 + Ac3H11_1395 0.75 -1.3
83,746 + Ac3H11_1395 0.75 +0.2
83,746 + Ac3H11_1395 0.75 +0.3
83,822 + Ac3H11_1395 0.85 -0.5
83,823 - Ac3H11_1395 0.85 +0.1
83,823 - Ac3H11_1395 0.85 +1.6
83,965 + +0.7
84,024 + +0.1
84,090 + Ac3H11_1396 0.15 +1.9
84,090 + Ac3H11_1396 0.15 -0.5
84,090 + Ac3H11_1396 0.15 -0.8
84,090 + Ac3H11_1396 0.15 -0.1
84,090 + Ac3H11_1396 0.15 -0.9
84,090 + Ac3H11_1396 0.15 -0.2
84,090 + Ac3H11_1396 0.15 -0.7
84,090 + Ac3H11_1396 0.15 -1.1
84,091 - Ac3H11_1396 0.15 -0.7
84,091 - Ac3H11_1396 0.15 -0.8
84,091 - Ac3H11_1396 0.15 +0.4
84,091 - Ac3H11_1396 0.15 -0.0
84,091 - Ac3H11_1396 0.15 -0.8
84,091 - Ac3H11_1396 0.15 +0.6
84,091 - Ac3H11_1396 0.15 -0.0
84,091 - Ac3H11_1396 0.15 -0.2
84,096 + Ac3H11_1396 0.16 -0.3
84,096 + Ac3H11_1396 0.16 -1.7
84,096 + Ac3H11_1396 0.16 -0.8
84,096 + Ac3H11_1396 0.16 -1.2
84,096 + Ac3H11_1396 0.16 -0.4
84,096 + Ac3H11_1396 0.16 +0.1
84,096 + Ac3H11_1396 0.16 -0.4
84,097 - Ac3H11_1396 0.16 +0.6
84,097 - Ac3H11_1396 0.16 -0.6
84,097 - Ac3H11_1396 0.16 -0.4
84,133 - Ac3H11_1396 0.21 -0.2
84,525 + Ac3H11_1396 0.71 +0.3
84,525 + Ac3H11_1396 0.71 +0.5
84,526 - Ac3H11_1396 0.71 -0.8
84,526 - Ac3H11_1396 0.71 -0.2
84,526 - Ac3H11_1396 0.71 -0.9
84,552 + Ac3H11_1396 0.74 +0.1
84,552 + Ac3H11_1396 0.74 -0.0
84,552 + Ac3H11_1396 0.74 -0.5
84,552 + Ac3H11_1396 0.74 -1.1
84,552 + Ac3H11_1396 0.74 -0.2
84,553 - Ac3H11_1396 0.74 -0.7
84,553 - Ac3H11_1396 0.74 -0.7
84,553 - Ac3H11_1396 0.74 -0.2
84,766 + -0.2
84,766 + -0.5
84,796 - -0.3
84,925 + -0.2
84,925 + -1.9
84,925 + -0.7
84,925 + +0.7
84,926 - -0.7
84,926 - -0.6
84,926 - -0.9
84,926 - +0.2
84,926 - -1.5
85,377 + Ac3H11_1397 0.23 -0.4
85,377 + Ac3H11_1397 0.23 +0.6
85,377 + Ac3H11_1397 0.23 -2.0
85,377 + Ac3H11_1397 0.23 +0.4
85,378 - Ac3H11_1397 0.23 -0.5
85,378 - Ac3H11_1397 0.23 -0.0
85,378 - Ac3H11_1397 0.23 +0.6
85,453 + Ac3H11_1397 0.26 +0.2
85,453 + Ac3H11_1397 0.26 -0.7
85,453 + Ac3H11_1397 0.26 -0.4
85,453 + Ac3H11_1397 0.26 -1.0
85,453 + Ac3H11_1397 0.26 -0.6
85,453 + Ac3H11_1397 0.26 -0.4
85,454 - Ac3H11_1397 0.26 -0.4
85,454 - Ac3H11_1397 0.26 -0.1
85,454 - Ac3H11_1397 0.26 -0.2
85,454 - Ac3H11_1397 0.26 -1.6
85,454 - Ac3H11_1397 0.26 +0.2
85,454 - Ac3H11_1397 0.26 -0.3
85,454 - Ac3H11_1397 0.26 +0.3
85,454 - Ac3H11_1397 0.26 -0.7
85,454 - Ac3H11_1397 0.26 -0.3
85,454 - Ac3H11_1397 0.26 -1.2
85,636 + Ac3H11_1397 0.35 -0.5
85,636 + Ac3H11_1397 0.35 +0.2
85,636 + Ac3H11_1397 0.35 -0.9
85,636 + Ac3H11_1397 0.35 -0.5
85,636 + Ac3H11_1397 0.35 -0.4
85,636 + Ac3H11_1397 0.35 -0.3
85,637 - Ac3H11_1397 0.35 -0.8
85,637 - Ac3H11_1397 0.35 -0.6
85,645 + Ac3H11_1397 0.35 -0.2
85,645 + Ac3H11_1397 0.35 -0.2
85,645 + Ac3H11_1397 0.35 -0.4
85,645 + Ac3H11_1397 0.35 -0.0
85,721 - Ac3H11_1397 0.38 -0.0

Or see this region's nucleotide sequence