Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2321 and DvMF_2322 are separated by 341 nucleotides DvMF_2322 and DvMF_2323 are separated by 498 nucleotides
DvMF_2321: DvMF_2321 - hypothetical protein (RefSeq), at 2,920,577 to 2,921,281
_2321
DvMF_2322: DvMF_2322 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq), at 2,921,623 to 2,924,337
_2322
DvMF_2323: DvMF_2323 - hypothetical protein (RefSeq), at 2,924,836 to 2,925,915
_2323
Position (kb)
2921
2922
2923
2924
2925 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2920.661 kb on - strand, within DvMF_2321 at 2920.833 kb on - strand, within DvMF_2321 at 2921.028 kb on + strand, within DvMF_2321 at 2921.094 kb on - strand, within DvMF_2321 at 2921.123 kb on + strand, within DvMF_2321 at 2921.290 kb on - strand at 2921.343 kb on + strand at 2921.543 kb on + strand at 2921.838 kb on + strand at 2921.914 kb on - strand, within DvMF_2322 at 2921.988 kb on + strand, within DvMF_2322 at 2922.127 kb on + strand, within DvMF_2322 at 2922.259 kb on + strand, within DvMF_2322 at 2922.417 kb on - strand, within DvMF_2322 at 2922.715 kb on - strand, within DvMF_2322 at 2923.030 kb on + strand, within DvMF_2322 at 2923.146 kb on + strand, within DvMF_2322 at 2923.241 kb on + strand, within DvMF_2322 at 2923.492 kb on - strand, within DvMF_2322 at 2923.676 kb on + strand, within DvMF_2322 at 2923.695 kb on - strand, within DvMF_2322 at 2923.741 kb on - strand, within DvMF_2322 at 2923.751 kb on - strand, within DvMF_2322 at 2924.012 kb on + strand, within DvMF_2322 at 2925.127 kb on - strand, within DvMF_2323 at 2925.255 kb on + strand, within DvMF_2323
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 2,920,661 - DvMF_2321 0.12 -2.3 2,920,833 - DvMF_2321 0.36 -0.2 2,921,028 + DvMF_2321 0.64 -0.7 2,921,094 - DvMF_2321 0.73 -0.7 2,921,123 + DvMF_2321 0.77 -0.2 2,921,290 - -0.2 2,921,343 + -0.8 2,921,543 + -0.5 2,921,838 + +0.3 2,921,914 - DvMF_2322 0.11 -0.7 2,921,988 + DvMF_2322 0.13 -1.3 2,922,127 + DvMF_2322 0.19 -0.7 2,922,259 + DvMF_2322 0.23 -0.1 2,922,417 - DvMF_2322 0.29 -0.9 2,922,715 - DvMF_2322 0.40 -0.6 2,923,030 + DvMF_2322 0.52 -1.0 2,923,146 + DvMF_2322 0.56 -0.7 2,923,241 + DvMF_2322 0.60 -0.1 2,923,492 - DvMF_2322 0.69 -0.8 2,923,676 + DvMF_2322 0.76 -1.5 2,923,695 - DvMF_2322 0.76 -0.2 2,923,741 - DvMF_2322 0.78 -1.0 2,923,751 - DvMF_2322 0.78 -0.6 2,924,012 + DvMF_2322 0.88 -0.4 2,925,127 - DvMF_2323 0.27 -0.3 2,925,255 + DvMF_2323 0.39 -3.0
Or see this region's nucleotide sequence