Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2215
Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Tetracycline 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,766,914 | - | DvMF_2213 | 0.69 | -0.3 | |
2,766,916 | + | DvMF_2213 | 0.69 | -2.2 | |
2,766,996 | + | DvMF_2213 | 0.84 | -2.4 | |
2,767,267 | - | DvMF_2214 | 0.14 | +0.1 | |
2,767,427 | - | DvMF_2214 | 0.42 | -0.6 | |
2,767,529 | - | DvMF_2214 | 0.59 | -1.3 | |
2,767,854 | + | -1.5 | |||
2,768,096 | + | fliP | DvMF_2215 | 0.22 | -2.4 |
2,768,133 | - | fliP | DvMF_2215 | 0.26 | -1.9 |
2,768,133 | - | fliP | DvMF_2215 | 0.26 | -2.0 |
2,768,136 | + | fliP | DvMF_2215 | 0.27 | -2.7 |
2,768,299 | - | fliP | DvMF_2215 | 0.45 | -1.7 |
2,768,315 | - | fliP | DvMF_2215 | 0.47 | -2.4 |
2,768,466 | - | fliP | DvMF_2215 | 0.64 | -1.9 |
2,768,575 | + | fliP | DvMF_2215 | 0.76 | -2.2 |
2,768,892 | - | DvMF_2216 | 0.35 | -1.7 | |
2,769,297 | - | -0.4 | |||
2,769,309 | - | -0.7 | |||
2,769,353 | - | DvMF_2217 | 0.10 | -1.0 | |
2,769,617 | - | DvMF_2217 | 0.36 | -0.5 |
Or see this region's nucleotide sequence