Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1868 and DvMF_1869 are separated by 235 nucleotides DvMF_1869 and DvMF_1870 are separated by 223 nucleotides
DvMF_1868: DvMF_1868 - protein of unknown function DUF162 (RefSeq), at 2,292,001 to 2,294,151
_1868
DvMF_1869: DvMF_1869 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 2,294,387 to 2,296,210
_1869
DvMF_1870: DvMF_1870 - protein of unknown function DUF362 (RefSeq), at 2,296,434 to 2,297,339
_1870
Position (kb)
2294
2295
2296
2297 Strain fitness (log2 ratio)
-2
-1
0
1 at 2293.481 kb on - strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.648 kb on - strand, within DvMF_1868 at 2293.990 kb on + strand at 2293.997 kb on + strand at 2293.998 kb on - strand at 2294.291 kb on - strand at 2294.348 kb on + strand at 2294.788 kb on + strand, within DvMF_1869 at 2294.928 kb on + strand, within DvMF_1869 at 2295.004 kb on + strand, within DvMF_1869 at 2295.521 kb on - strand, within DvMF_1869 at 2295.663 kb on + strand, within DvMF_1869 at 2295.865 kb on + strand, within DvMF_1869 at 2296.024 kb on + strand, within DvMF_1869 at 2296.403 kb on - strand at 2296.468 kb on + strand at 2296.546 kb on + strand, within DvMF_1870 at 2296.719 kb on - strand, within DvMF_1870 at 2296.795 kb on + strand, within DvMF_1870 at 2297.048 kb on + strand, within DvMF_1870 at 2297.056 kb on - strand, within DvMF_1870
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 2,293,481 - DvMF_1868 0.69 -1.2 2,293,640 + DvMF_1868 0.76 +0.1 2,293,640 + DvMF_1868 0.76 -1.4 2,293,648 - DvMF_1868 0.77 -0.4 2,293,990 + -0.1 2,293,997 + -0.9 2,293,998 - -2.4 2,294,291 - -0.5 2,294,348 + -0.2 2,294,788 + DvMF_1869 0.22 +0.7 2,294,928 + DvMF_1869 0.30 -0.1 2,295,004 + DvMF_1869 0.34 -0.0 2,295,521 - DvMF_1869 0.62 -0.6 2,295,663 + DvMF_1869 0.70 +1.7 2,295,865 + DvMF_1869 0.81 -0.5 2,296,024 + DvMF_1869 0.90 +0.4 2,296,403 - -0.4 2,296,468 + -1.6 2,296,546 + DvMF_1870 0.12 +0.5 2,296,719 - DvMF_1870 0.31 -0.5 2,296,795 + DvMF_1870 0.40 +0.4 2,297,048 + DvMF_1870 0.68 -0.3 2,297,056 - DvMF_1870 0.69 +0.3
Or see this region's nucleotide sequence