Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1852 and DvMF_1853 are separated by 191 nucleotides DvMF_1853 and DvMF_1854 are separated by 108 nucleotides
DvMF_1852: DvMF_1852 - glycosyl transferase family 2 (RefSeq), at 2,264,492 to 2,266,969
_1852
DvMF_1853: DvMF_1853 - glycosyl transferase group 1 (RefSeq), at 2,267,161 to 2,268,318
_1853
DvMF_1854: DvMF_1854 - NAD-dependent epimerase/dehydratase (RefSeq), at 2,268,427 to 2,269,359
_1854
Position (kb)
2267
2268
2269 Strain fitness (log2 ratio)
-2
-1
0
1 at 2266.189 kb on + strand, within DvMF_1852 at 2266.311 kb on + strand, within DvMF_1852 at 2266.316 kb on + strand, within DvMF_1852 at 2266.424 kb on - strand, within DvMF_1852 at 2266.574 kb on + strand, within DvMF_1852 at 2266.598 kb on + strand, within DvMF_1852 at 2266.627 kb on + strand, within DvMF_1852 at 2266.689 kb on - strand, within DvMF_1852 at 2266.854 kb on - strand at 2266.928 kb on + strand at 2266.972 kb on + strand at 2267.082 kb on - strand at 2267.128 kb on - strand at 2267.317 kb on + strand, within DvMF_1853 at 2267.446 kb on - strand, within DvMF_1853 at 2267.679 kb on - strand, within DvMF_1853 at 2267.842 kb on - strand, within DvMF_1853 at 2267.916 kb on + strand, within DvMF_1853 at 2267.937 kb on - strand, within DvMF_1853 at 2268.015 kb on - strand, within DvMF_1853 at 2268.052 kb on - strand, within DvMF_1853 at 2268.057 kb on - strand, within DvMF_1853 at 2268.667 kb on - strand, within DvMF_1854 at 2268.837 kb on + strand, within DvMF_1854 at 2268.937 kb on + strand, within DvMF_1854 at 2269.043 kb on - strand, within DvMF_1854 at 2269.068 kb on + strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tetracycline 0.0005 mg/ml remove 2,266,189 + DvMF_1852 0.68 +1.3 2,266,311 + DvMF_1852 0.73 -0.2 2,266,316 + DvMF_1852 0.74 +0.0 2,266,424 - DvMF_1852 0.78 -0.9 2,266,574 + DvMF_1852 0.84 -0.8 2,266,598 + DvMF_1852 0.85 -0.6 2,266,627 + DvMF_1852 0.86 -0.8 2,266,689 - DvMF_1852 0.89 -0.6 2,266,854 - -2.6 2,266,928 + -0.9 2,266,972 + +0.3 2,267,082 - +0.1 2,267,128 - -1.3 2,267,317 + DvMF_1853 0.13 -0.4 2,267,446 - DvMF_1853 0.25 -0.5 2,267,679 - DvMF_1853 0.45 -1.1 2,267,842 - DvMF_1853 0.59 -0.9 2,267,916 + DvMF_1853 0.65 +0.5 2,267,937 - DvMF_1853 0.67 -0.6 2,268,015 - DvMF_1853 0.74 -0.2 2,268,052 - DvMF_1853 0.77 -0.5 2,268,057 - DvMF_1853 0.77 -1.1 2,268,667 - DvMF_1854 0.26 -1.3 2,268,837 + DvMF_1854 0.44 -0.7 2,268,937 + DvMF_1854 0.55 -0.5 2,269,043 - DvMF_1854 0.66 -0.2 2,269,068 + DvMF_1854 0.69 -0.4 2,269,143 - DvMF_1854 0.77 -0.2 2,269,143 - DvMF_1854 0.77 -0.8
Or see this region's nucleotide sequence