Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1147

Experiment: MoYLS4 with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Tetracycline 0.0005 mg/ml
1,405,414	+				-1.0
1,405,414	+				-0.6
1,405,414	+				-0.7
1,405,422	-				-0.1
1,405,422	-				-1.0
1,405,748	+				-0.4
1,405,820	+				-2.1
1,405,875	+				-0.2
1,405,933	+				-0.5
1,405,941	-				+0.2
1,406,094	-				-0.2
1,406,414	+				-1.6
1,406,615	-		DvMF_1147	0.13	-0.3
1,406,820	-		DvMF_1147	0.26	-0.9
1,406,864	-		DvMF_1147	0.29	-0.6
1,406,905	+		DvMF_1147	0.32	+0.1
1,407,006	-		DvMF_1147	0.38	-2.3
1,407,076	-		DvMF_1147	0.43	-0.7
1,407,106	-		DvMF_1147	0.45	-0.2
1,407,329	+		DvMF_1147	0.59	-1.5
1,407,337	-		DvMF_1147	0.59	-0.7
1,407,337	-		DvMF_1147	0.59	-0.2
1,407,444	+		DvMF_1147	0.66	-1.4
1,407,465	-		DvMF_1147	0.68	-0.7
1,407,488	-		DvMF_1147	0.69	-0.8
1,407,679	-		DvMF_1147	0.81	-0.3
1,407,742	-		DvMF_1147	0.86	-0.5
1,407,918	+				+0.5
1,407,948	+				-0.8
1,407,948	+				-0.0
1,407,948	+				-1.6
1,407,948	+				-0.5
1,407,948	+				-1.2
1,407,948	+				+1.0
1,407,956	-				-0.3
1,407,956	-				-1.5
1,407,956	-				-0.7
1,407,956	-				-1.3
1,407,956	-				-0.8
1,407,956	-				+1.2
1,407,956	-				-0.3
1,407,956	-				-3.3
1,407,973	+				-1.0
1,407,980	-				-0.6
1,408,112	+				-1.6
1,408,389	-				-1.6
1,408,399	-				-3.0
1,408,440	-				-0.1
1,408,507	+		DvMF_1148	0.13	-1.0
1,408,645	-		DvMF_1148	0.21	-2.7
1,408,682	+		DvMF_1148	0.23	-1.0
1,408,682	+		DvMF_1148	0.23	-1.4
1,408,690	-		DvMF_1148	0.23	-1.4
1,408,690	-		DvMF_1148	0.23	-2.1
1,408,720	+		DvMF_1148	0.25	-0.5
1,408,807	+		DvMF_1148	0.30	-0.8
1,408,940	+		DvMF_1148	0.37	-0.8
1,408,953	-		DvMF_1148	0.38	-0.9
1,408,961	+		DvMF_1148	0.38	-1.3